| Literature DB >> 22590201 |
Xiao-Kai Zhang, Bing-Ni Liu, Mo Liu, Deng-Ke Liu, Ping-Bao Wang.
Abstract
The mol-ecular skeleton of the title compound, C(9)H(11)N(3), is almost planar, with a maximum deviation of 0.0325 (19) Å for the amino N atom. In the crystal, N-H⋯N hydrogen bonds establish the packing.Entities:
Year: 2012 PMID: 22590201 PMCID: PMC3344439 DOI: 10.1107/S1600536812013694
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H11N3 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2ac | Cell parameters from 2241 reflections |
| θ = 3.3–27.9° | |
| µ = 0.08 mm−1 | |
| Prism, yellow | |
| 0.22 × 0.18 × 0.12 mm |
| Rigaku Saturn diffractometer | 2002 independent reflections |
| Radiation source: rotating anode | 1588 reflections with |
| Confocal monochromator | |
| ω scans | θmax = 27.8°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 7967 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.002 | |
| 2002 reflections | Δρmax = 0.16 e Å−3 |
| 118 parameters | Δρmin = −0.14 e Å−3 |
| 4 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.12 (2) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.10351 (9) | 0.83358 (18) | 0.4784 (4) | 0.0568 (5) | |
| N2 | 0.14711 (8) | 0.72497 (19) | 0.5968 (4) | 0.0538 (5) | |
| N3 | 0.19922 (10) | 0.1548 (2) | 0.4581 (5) | 0.0699 (6) | |
| H3A | 0.1689 (11) | 0.071 (2) | 0.449 (5) | 0.084* | |
| H3B | 0.2287 (12) | 0.150 (3) | 0.587 (3) | 0.084* | |
| C1 | 0.01866 (14) | 0.8321 (3) | 0.1420 (6) | 0.0785 (8) | |
| H1A | −0.0293 | 0.7890 | 0.1680 | 0.118* | |
| H1B | 0.0330 | 0.8131 | −0.0188 | 0.118* | |
| H1C | 0.0182 | 0.9454 | 0.1721 | 0.118* | |
| C2 | 0.07147 (10) | 0.7530 (3) | 0.3043 (5) | 0.0549 (5) | |
| C3 | 0.09469 (10) | 0.5900 (2) | 0.3044 (4) | 0.0493 (5) | |
| C4 | 0.08096 (11) | 0.4531 (3) | 0.1658 (5) | 0.0596 (6) | |
| H4 | 0.0489 | 0.4579 | 0.0384 | 0.072* | |
| C5 | 0.11558 (12) | 0.3130 (3) | 0.2223 (5) | 0.0615 (6) | |
| H5 | 0.1072 | 0.2228 | 0.1295 | 0.074* | |
| C6 | 0.16353 (10) | 0.3008 (2) | 0.4163 (5) | 0.0559 (6) | |
| C7 | 0.17824 (11) | 0.4336 (2) | 0.5559 (4) | 0.0529 (5) | |
| H7 | 0.2102 | 0.4277 | 0.6836 | 0.063* | |
| C8 | 0.14298 (9) | 0.5768 (2) | 0.4964 (4) | 0.0472 (5) | |
| C9 | 0.19061 (12) | 0.7763 (3) | 0.7940 (5) | 0.0624 (6) | |
| H9A | 0.1936 | 0.6913 | 0.9081 | 0.094* | |
| H9B | 0.1685 | 0.8688 | 0.8655 | 0.094* | |
| H9C | 0.2388 | 0.8032 | 0.7402 | 0.094* |
| N1 | 0.0555 (9) | 0.0501 (9) | 0.0648 (12) | 0.0046 (6) | −0.0046 (8) | −0.0011 (9) |
| N2 | 0.0544 (8) | 0.0497 (9) | 0.0573 (10) | 0.0024 (7) | −0.0077 (8) | −0.0037 (8) |
| N3 | 0.0716 (13) | 0.0426 (9) | 0.0956 (17) | −0.0012 (7) | −0.0004 (12) | 0.0028 (11) |
| C1 | 0.0711 (14) | 0.0782 (15) | 0.0862 (19) | 0.0149 (11) | −0.0214 (14) | 0.0054 (14) |
| C2 | 0.0474 (9) | 0.0563 (11) | 0.0610 (12) | 0.0026 (8) | −0.0019 (9) | 0.0031 (10) |
| C3 | 0.0462 (9) | 0.0521 (11) | 0.0496 (11) | −0.0036 (7) | −0.0001 (8) | 0.0017 (9) |
| C4 | 0.0581 (11) | 0.0599 (12) | 0.0608 (13) | −0.0082 (9) | −0.0086 (10) | −0.0051 (11) |
| C5 | 0.0655 (12) | 0.0509 (11) | 0.0682 (15) | −0.0097 (9) | −0.0008 (11) | −0.0082 (10) |
| C6 | 0.0517 (10) | 0.0463 (10) | 0.0696 (15) | −0.0031 (8) | 0.0064 (10) | 0.0027 (10) |
| C7 | 0.0509 (9) | 0.0495 (11) | 0.0581 (12) | −0.0016 (7) | 0.0008 (9) | 0.0074 (9) |
| C8 | 0.0429 (8) | 0.0461 (10) | 0.0526 (11) | −0.0025 (6) | 0.0018 (8) | 0.0037 (9) |
| C9 | 0.0663 (13) | 0.0651 (13) | 0.0556 (13) | −0.0020 (10) | −0.0097 (10) | −0.0054 (11) |
| N1—C2 | 1.329 (3) | C3—C8 | 1.404 (3) |
| N1—N2 | 1.380 (2) | C3—C4 | 1.407 (3) |
| N2—C8 | 1.362 (2) | C4—C5 | 1.367 (3) |
| N2—C9 | 1.436 (3) | C4—H4 | 0.9300 |
| N3—C6 | 1.401 (3) | C5—C6 | 1.409 (3) |
| N3—H3A | 0.893 (9) | C5—H5 | 0.9300 |
| N3—H3B | 0.909 (10) | C6—C7 | 1.387 (3) |
| C1—C2 | 1.487 (3) | C7—C8 | 1.399 (3) |
| C1—H1A | 0.9600 | C7—H7 | 0.9300 |
| C1—H1B | 0.9600 | C9—H9A | 0.9600 |
| C1—H1C | 0.9600 | C9—H9B | 0.9600 |
| C2—C3 | 1.424 (3) | C9—H9C | 0.9600 |
| C2—N1—N2 | 106.43 (17) | C5—C4—H4 | 120.6 |
| C8—N2—N1 | 111.14 (17) | C3—C4—H4 | 120.6 |
| C8—N2—C9 | 128.72 (17) | C4—C5—C6 | 122.2 (2) |
| N1—N2—C9 | 120.11 (17) | C4—C5—H5 | 118.9 |
| C6—N3—H3A | 112.3 (15) | C6—C5—H5 | 118.9 |
| C6—N3—H3B | 116.7 (15) | C7—C6—N3 | 120.5 (2) |
| H3A—N3—H3B | 112.6 (15) | C7—C6—C5 | 120.41 (19) |
| C2—C1—H1A | 109.5 | N3—C6—C5 | 119.0 (2) |
| C2—C1—H1B | 109.5 | C6—C7—C8 | 117.1 (2) |
| H1A—C1—H1B | 109.5 | C6—C7—H7 | 121.4 |
| C2—C1—H1C | 109.5 | C8—C7—H7 | 121.4 |
| H1A—C1—H1C | 109.5 | N2—C8—C7 | 130.43 (19) |
| H1B—C1—H1C | 109.5 | N2—C8—C3 | 106.65 (16) |
| N1—C2—C3 | 110.53 (19) | C7—C8—C3 | 122.91 (18) |
| N1—C2—C1 | 121.3 (2) | N2—C9—H9A | 109.5 |
| C3—C2—C1 | 128.1 (2) | N2—C9—H9B | 109.5 |
| C8—C3—C4 | 118.65 (18) | H9A—C9—H9B | 109.5 |
| C8—C3—C2 | 105.24 (18) | N2—C9—H9C | 109.5 |
| C4—C3—C2 | 136.1 (2) | H9A—C9—H9C | 109.5 |
| C5—C4—C3 | 118.7 (2) | H9B—C9—H9C | 109.5 |
| C2—N1—N2—C8 | 0.5 (2) | N3—C6—C7—C8 | 177.1 (2) |
| C2—N1—N2—C9 | 178.8 (2) | C5—C6—C7—C8 | 0.7 (3) |
| N2—N1—C2—C3 | −0.9 (2) | N1—N2—C8—C7 | 179.1 (2) |
| N2—N1—C2—C1 | 178.5 (2) | C9—N2—C8—C7 | 1.0 (3) |
| N1—C2—C3—C8 | 0.9 (2) | N1—N2—C8—C3 | 0.1 (2) |
| C1—C2—C3—C8 | −178.4 (2) | C9—N2—C8—C3 | −178.0 (2) |
| N1—C2—C3—C4 | −178.9 (2) | C6—C7—C8—N2 | −179.1 (2) |
| C1—C2—C3—C4 | 1.8 (4) | C6—C7—C8—C3 | −0.2 (3) |
| C8—C3—C4—C5 | −0.5 (3) | C4—C3—C8—N2 | 179.25 (18) |
| C2—C3—C4—C5 | 179.2 (2) | C2—C3—C8—N2 | −0.6 (2) |
| C3—C4—C5—C6 | 1.0 (4) | C4—C3—C8—C7 | 0.2 (3) |
| C4—C5—C6—C7 | −1.1 (3) | C2—C3—C8—C7 | −179.67 (19) |
| C4—C5—C6—N3 | −177.6 (2) |
| H··· | ||||
| N3—H3 | 0.89 (1) | 2.32 (1) | 3.203 (2) | 169 (2) |
| N3—H3 | 0.91 (1) | 2.48 (1) | 3.384 (2) | 175 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3 | 0.89 (1) | 2.32 (1) | 3.203 (2) | 169 (2) |
| N3—H3 | 0.91 (1) | 2.48 (1) | 3.384 (2) | 175 (2) |
Symmetry codes: (i) ; (ii) .