Literature DB >> 21754756

3-(2,4-Dichloro-benzyl-idene)-1,5-dioxa-spiro-[5.5]undecane-2,4-dione.

Wu-Lan Zeng1.   

Abstract

In the title mol-ecule, C(16)H(14)Cl(2)O(4), the 1,3-dioxane and cyclo-hexane rings exhibit distorted boat and chair conformations, respectively. In the crystal, a pair of weak inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into an inversion dimer.

Entities:  

Year:  2011        PMID: 21754756      PMCID: PMC3120393          DOI: 10.1107/S1600536811016813

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For ring puckering parameters, see: Cremer & Pople (1975 ▶). For related structures, see: Zeng (2011a ▶,b ▶).

Experimental

Crystal data

C16H14Cl2O4 M = 341.17 Triclinic, a = 7.2378 (6) Å b = 7.6496 (7) Å c = 14.8099 (13) Å α = 100.569 (2)° β = 100.870 (2)° γ = 99.050 (1)° V = 775.80 (12) Å3 Z = 2 Mo Kα radiation μ = 0.43 mm−1 T = 298 K 0.24 × 0.22 × 0.16 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.903, T max = 0.934 4085 measured reflections 2697 independent reflections 1596 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.073 S = 1.01 2697 reflections 199 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.21 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811016813/is2706sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811016813/is2706Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811016813/is2706Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H14Cl2O4Z = 2
Mr = 341.17F(000) = 352
Triclinic, P1Dx = 1.461 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.2378 (6) ÅCell parameters from 1133 reflections
b = 7.6496 (7) Åθ = 3.0–26.3°
c = 14.8099 (13) ŵ = 0.43 mm1
α = 100.569 (2)°T = 298 K
β = 100.870 (2)°Block, colorless
γ = 99.050 (1)°0.24 × 0.22 × 0.16 mm
V = 775.80 (12) Å3
Bruker SMART CCD area-detector diffractometer2697 independent reflections
Radiation source: fine-focus sealed tube1596 reflections with I > 2σ(I)
graphiteRint = 0.023
φ and ω scansθmax = 25.0°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −8→7
Tmin = 0.903, Tmax = 0.934k = −9→8
4085 measured reflectionsl = −15→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.073H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0188P)2] where P = (Fo2 + 2Fc2)/3
2697 reflections(Δ/σ)max = 0.001
199 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.24503 (11)1.26534 (9)0.42676 (5)0.0765 (3)
Cl20.26105 (12)1.05072 (12)0.75170 (5)0.0981 (3)
O10.0537 (2)0.4031 (2)0.21259 (10)0.0524 (4)
O20.1859 (2)0.5715 (2)0.11368 (10)0.0544 (4)
O3−0.0445 (2)0.5412 (2)0.33392 (12)0.0641 (5)
O40.2444 (3)0.8711 (2)0.14747 (12)0.0737 (6)
C10.0566 (4)0.5535 (3)0.27859 (17)0.0477 (6)
C20.1771 (3)0.7246 (3)0.27024 (16)0.0446 (6)
C30.2092 (4)0.7332 (4)0.17488 (18)0.0542 (7)
C40.1872 (3)0.4094 (3)0.15131 (15)0.0475 (6)
C50.1083 (4)0.2509 (3)0.06858 (15)0.0590 (7)
H5A−0.01520.26480.03480.071*
H5B0.08900.13960.09110.071*
C60.2453 (5)0.2383 (4)0.00165 (18)0.0758 (9)
H6A0.19680.1292−0.04770.091*
H6B0.24970.3416−0.02780.091*
C70.4462 (5)0.2341 (4)0.0524 (2)0.0789 (9)
H7A0.53050.23600.00870.095*
H7B0.44470.12220.07450.095*
C80.5242 (4)0.3952 (4)0.13604 (18)0.0693 (8)
H8A0.54200.50640.11330.083*
H8B0.64830.38290.16990.083*
C90.3869 (3)0.4063 (3)0.20302 (16)0.0540 (7)
H9A0.38260.30250.23220.065*
H9B0.43430.51520.25250.065*
C100.2437 (3)0.8767 (3)0.33824 (16)0.0504 (6)
H100.29870.97590.31750.060*
C110.2451 (3)0.9140 (3)0.43884 (16)0.0466 (6)
C120.2502 (3)1.0907 (3)0.48706 (18)0.0499 (6)
C130.2546 (3)1.1339 (3)0.58226 (18)0.0583 (7)
H130.25571.25230.61220.070*
C140.2571 (4)0.9983 (4)0.63227 (17)0.0614 (7)
C150.2579 (4)0.8223 (4)0.58863 (18)0.0626 (7)
H150.26250.73230.62310.075*
C160.2516 (3)0.7824 (3)0.49329 (17)0.0556 (7)
H160.25180.66390.46410.067*
U11U22U33U12U13U23
Cl10.0930 (6)0.0474 (4)0.0950 (5)0.0228 (4)0.0231 (4)0.0214 (4)
Cl20.1014 (7)0.1296 (8)0.0606 (5)0.0288 (6)0.0176 (4)0.0099 (5)
O10.0548 (12)0.0464 (10)0.0572 (10)0.0053 (8)0.0212 (9)0.0094 (8)
O20.0702 (13)0.0456 (10)0.0496 (9)0.0117 (9)0.0128 (9)0.0161 (9)
O30.0681 (13)0.0590 (12)0.0697 (12)0.0082 (10)0.0341 (11)0.0100 (10)
O40.1040 (17)0.0512 (12)0.0730 (13)0.0128 (11)0.0244 (11)0.0288 (10)
C10.0491 (17)0.0479 (16)0.0474 (15)0.0122 (13)0.0102 (13)0.0121 (13)
C20.0489 (16)0.0360 (14)0.0520 (15)0.0104 (12)0.0141 (13)0.0126 (12)
C30.0559 (18)0.0515 (17)0.0574 (17)0.0132 (14)0.0092 (14)0.0189 (15)
C40.0528 (17)0.0466 (15)0.0479 (14)0.0090 (13)0.0178 (13)0.0166 (12)
C50.070 (2)0.0499 (16)0.0520 (15)0.0002 (14)0.0152 (14)0.0059 (13)
C60.103 (3)0.0626 (19)0.0573 (17)−0.0016 (18)0.0341 (18)0.0017 (15)
C70.088 (3)0.072 (2)0.090 (2)0.0206 (18)0.051 (2)0.0148 (18)
C80.059 (2)0.0699 (19)0.0822 (19)0.0148 (16)0.0238 (16)0.0149 (17)
C90.0538 (18)0.0544 (16)0.0552 (15)0.0125 (13)0.0128 (14)0.0135 (13)
C100.0478 (17)0.0459 (16)0.0642 (17)0.0165 (13)0.0163 (13)0.0191 (14)
C110.0400 (16)0.0424 (15)0.0575 (16)0.0100 (12)0.0089 (12)0.0117 (13)
C120.0423 (16)0.0448 (15)0.0614 (16)0.0100 (12)0.0090 (12)0.0103 (13)
C130.0466 (17)0.0541 (17)0.0687 (18)0.0129 (13)0.0097 (14)0.0008 (15)
C140.0440 (18)0.076 (2)0.0596 (17)0.0110 (15)0.0103 (13)0.0060 (16)
C150.0577 (19)0.070 (2)0.0611 (18)0.0108 (15)0.0078 (15)0.0236 (16)
C160.0557 (18)0.0443 (15)0.0623 (17)0.0084 (13)0.0069 (14)0.0086 (14)
Cl1—C121.739 (2)C7—C81.526 (3)
Cl2—C141.734 (2)C7—H7A0.9700
O1—C11.361 (3)C7—H7B0.9700
O1—C41.446 (2)C8—C91.532 (3)
O2—C31.358 (3)C8—H8A0.9700
O2—C41.450 (2)C8—H8B0.9700
O3—C11.203 (2)C9—H9A0.9700
O4—C31.206 (3)C9—H9B0.9700
C1—C21.493 (3)C10—C111.462 (3)
C2—C101.346 (3)C10—H100.9300
C2—C31.485 (3)C11—C121.400 (3)
C4—C51.507 (3)C11—C161.402 (3)
C4—C91.509 (3)C12—C131.381 (3)
C5—C61.530 (3)C13—C141.382 (3)
C5—H5A0.9700C13—H130.9300
C5—H5B0.9700C14—C151.383 (3)
C6—C71.514 (4)C15—C161.379 (3)
C6—H6A0.9700C15—H150.9300
C6—H6B0.9700C16—H160.9300
C1—O1—C4119.82 (19)H7A—C7—H7B108.0
C3—O2—C4118.34 (17)C7—C8—C9111.0 (2)
O3—C1—O1118.7 (2)C7—C8—H8A109.4
O3—C1—C2125.7 (2)C9—C8—H8A109.4
O1—C1—C2115.4 (2)C7—C8—H8B109.4
C10—C2—C3117.0 (2)C9—C8—H8B109.4
C10—C2—C1126.3 (2)H8A—C8—H8B108.0
C3—C2—C1116.4 (2)C4—C9—C8111.23 (19)
O4—C3—O2118.8 (2)C4—C9—H9A109.4
O4—C3—C2124.9 (2)C8—C9—H9A109.4
O2—C3—C2116.2 (2)C4—C9—H9B109.4
O1—C4—O2108.91 (17)C8—C9—H9B109.4
O1—C4—C5106.67 (19)H9A—C9—H9B108.0
O2—C4—C5106.30 (18)C2—C10—C11131.6 (2)
O1—C4—C9111.22 (17)C2—C10—H10114.2
O2—C4—C9110.75 (19)C11—C10—H10114.2
C5—C4—C9112.76 (19)C12—C11—C16116.3 (2)
C4—C5—C6111.0 (2)C12—C11—C10120.1 (2)
C4—C5—H5A109.4C16—C11—C10123.5 (2)
C6—C5—H5A109.4C13—C12—C11122.5 (2)
C4—C5—H5B109.4C13—C12—Cl1117.25 (19)
C6—C5—H5B109.4C11—C12—Cl1120.21 (19)
H5A—C5—H5B108.0C12—C13—C14118.8 (2)
C7—C6—C5111.9 (2)C12—C13—H13120.6
C7—C6—H6A109.2C14—C13—H13120.6
C5—C6—H6A109.2C13—C14—C15121.0 (2)
C7—C6—H6B109.2C13—C14—Cl2119.2 (2)
C5—C6—H6B109.2C15—C14—Cl2119.8 (2)
H6A—C6—H6B107.9C16—C15—C14119.0 (2)
C6—C7—C8111.6 (2)C16—C15—H15120.5
C6—C7—H7A109.3C14—C15—H15120.5
C8—C7—H7A109.3C15—C16—C11122.3 (2)
C6—C7—H7B109.3C15—C16—H16118.8
C8—C7—H7B109.3C11—C16—H16118.8
C4—O1—C1—O3−173.9 (2)C6—C7—C8—C954.4 (3)
C4—O1—C1—C210.6 (3)O1—C4—C9—C8174.74 (18)
O3—C1—C2—C1023.5 (4)O2—C4—C9—C8−64.0 (2)
O1—C1—C2—C10−161.3 (2)C5—C4—C9—C855.0 (3)
O3—C1—C2—C3−149.8 (2)C7—C8—C9—C4−54.3 (3)
O1—C1—C2—C325.3 (3)C3—C2—C10—C11−176.9 (2)
C4—O2—C3—O4166.2 (2)C1—C2—C10—C119.8 (4)
C4—O2—C3—C2−17.3 (3)C2—C10—C11—C12−154.4 (2)
C10—C2—C3—O4−19.7 (4)C2—C10—C11—C1629.0 (4)
C1—C2—C3—O4154.3 (2)C16—C11—C12—C13−2.2 (4)
C10—C2—C3—O2164.1 (2)C10—C11—C12—C13−179.0 (2)
C1—C2—C3—O2−21.9 (3)C16—C11—C12—Cl1179.42 (17)
C1—O1—C4—O2−47.4 (2)C10—C11—C12—Cl12.6 (3)
C1—O1—C4—C5−161.76 (18)C11—C12—C13—C141.1 (4)
C1—O1—C4—C974.9 (2)Cl1—C12—C13—C14179.48 (19)
C3—O2—C4—O151.0 (3)C12—C13—C14—C150.8 (4)
C3—O2—C4—C5165.5 (2)C12—C13—C14—Cl2−179.59 (19)
C3—O2—C4—C9−71.6 (2)C13—C14—C15—C16−1.4 (4)
O1—C4—C5—C6−176.71 (19)Cl2—C14—C15—C16178.97 (19)
O2—C4—C5—C667.2 (3)C14—C15—C16—C110.2 (4)
C9—C4—C5—C6−54.3 (3)C12—C11—C16—C151.6 (4)
C4—C5—C6—C753.8 (3)C10—C11—C16—C15178.3 (2)
C5—C6—C7—C8−54.4 (3)
D—H···AD—HH···AD···AD—H···A
C13—H13···O3i0.932.503.286 (3)143
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C13—H13⋯O3i0.932.503.286 (3)143

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  3-(4-Bromo-benzyl-idene)-1,5-dioxaspiro-[5.5]undecane-2,4-dione.

Authors:  Wu-Lan Zeng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-15

3.  3-(4-Fluoro-benzyl-idene)-1,5-dioxa-spiro-[5.5]undecane-2,4-dione.

Authors:  Wu-Lan Zeng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-08
  3 in total
  1 in total

1.  Crystal structure of 5-[4-(di-ethyl-amino)-benzyl-idene]-2,2-dimethyl-1,3-dioxane-4,6-dione.

Authors:  Egija Stepina; Dmitrijs Stepanovs; Inese Mierina; Mara Jure
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-09-26
  1 in total

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