Literature DB >> 21522968

3-(4-Fluoro-benzyl-idene)-1,5-dioxa-spiro-[5.5]undecane-2,4-dione.

Wu-Lan Zeng1.   

Abstract

In the title mol-ecule, C(16)H(15)FO(4), the fused 1,3-dioxane and cyclo-hexane rings exhibit a bath and a chair conformation, respectively. In the crystal, weak inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into centrosymmetric dimers.

Entities:  

Year:  2011        PMID: 21522968      PMCID: PMC3051599          DOI: 10.1107/S1600536810054395

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Zeng & Jian (2009 ▶); Zeng et al. (2009 ▶). For applications of spiro compounds, see: Jiang et al. (1998 ▶); Lian et al. (2008 ▶); Wei et al. (2008 ▶).

Experimental

Crystal data

C16H15FO4 M = 290.28 Triclinic, a = 5.6690 (11) Å b = 10.130 (2) Å c = 12.160 (2) Å α = 100.68 (3)° β = 90.73 (3)° γ = 91.20 (3)° V = 686.0 (2) Å3 Z = 2 Mo Kα radiation μ = 0.11 mm−1 T = 293 K 0.25 × 0.18 × 0.12 mm

Data collection

Bruker SMART CCD area-detector diffractometer 6753 measured reflections 3124 independent reflections 2481 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.127 S = 1.11 3124 reflections 190 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810054395/cv5023sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810054395/cv5023Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H15FO4Z = 2
Mr = 290.28F(000) = 304
Triclinic, P1Dx = 1.405 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.6690 (11) ÅCell parameters from 2481 reflections
b = 10.130 (2) Åθ = 3.4–27.5°
c = 12.160 (2) ŵ = 0.11 mm1
α = 100.68 (3)°T = 293 K
β = 90.73 (3)°Block, colourless
γ = 91.20 (3)°0.25 × 0.18 × 0.12 mm
V = 686.0 (2) Å3
Bruker SMART CCD area-detector diffractometer2481 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.029
graphiteθmax = 27.5°, θmin = 3.4°
phi and ω scansh = −6→7
6753 measured reflectionsk = −13→13
3124 independent reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.127H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.075P)2 + 0.0414P] where P = (Fo2 + 2Fc2)/3
3124 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O40.41354 (13)0.17850 (9)0.73171 (7)0.0412 (2)
O30.23315 (15)0.01227 (9)0.59454 (6)0.0443 (2)
O20.54128 (17)0.12738 (11)0.89002 (8)0.0566 (3)
O10.19126 (18)−0.19449 (10)0.62363 (8)0.0542 (3)
C80.21663 (19)−0.07730 (12)0.66337 (10)0.0397 (3)
F1−0.52419 (17)−0.46737 (10)0.87835 (8)0.0718 (3)
C70.41388 (19)0.09907 (13)0.80943 (9)0.0390 (3)
C11−0.0075 (2)−0.18139 (12)0.86756 (9)0.0386 (3)
C90.25581 (19)−0.02211 (12)0.78410 (9)0.0369 (3)
C40.23557 (19)0.15348 (12)0.64363 (9)0.0373 (3)
C15−0.3686 (2)−0.29703 (14)0.79341 (12)0.0483 (3)
H15A−0.4931−0.30970.74170.058*
C100.1751 (2)−0.07673 (12)0.86916 (10)0.0395 (3)
H10A0.2448−0.04350.93870.047*
C14−0.3539 (2)−0.37296 (13)0.87486 (11)0.0477 (3)
C5−0.00563 (19)0.19627 (13)0.68678 (10)0.0398 (3)
H5A−0.04310.15300.74940.048*
H5B−0.12330.16710.62820.048*
C16−0.1937 (2)−0.20081 (13)0.78976 (11)0.0446 (3)
H16A−0.2004−0.14830.73470.053*
C30.3168 (2)0.22760 (16)0.55360 (11)0.0510 (3)
H3A0.21940.19920.48690.061*
H3B0.47830.20430.53480.061*
C13−0.1757 (3)−0.35709 (15)0.95384 (11)0.0526 (3)
H13A−0.1711−0.41061.00820.063*
C12−0.0029 (2)−0.25937 (14)0.95053 (10)0.0473 (3)
H12A0.1176−0.24571.00430.057*
C6−0.0155 (2)0.34786 (14)0.72405 (12)0.0522 (3)
H6A−0.17490.37230.74600.063*
H6B0.08790.37580.78870.063*
C20.3031 (3)0.37944 (17)0.59021 (14)0.0625 (4)
H2A0.41820.40980.64970.075*
H2B0.34210.42260.52770.075*
C10.0590 (3)0.42054 (17)0.63108 (15)0.0642 (4)
H1A−0.05360.39970.56920.077*
H1B0.05900.51680.65840.077*
U11U22U33U12U13U23
O40.0287 (4)0.0539 (5)0.0422 (4)−0.0084 (3)−0.0059 (3)0.0136 (4)
O30.0462 (5)0.0525 (5)0.0318 (4)0.0047 (4)0.0000 (3)0.0016 (4)
O20.0543 (5)0.0664 (6)0.0495 (5)−0.0195 (5)−0.0240 (4)0.0156 (5)
O10.0602 (6)0.0480 (5)0.0484 (5)−0.0020 (4)0.0003 (4)−0.0067 (4)
C80.0311 (5)0.0475 (7)0.0380 (6)0.0005 (5)0.0000 (4)0.0010 (5)
F10.0644 (6)0.0712 (6)0.0810 (6)−0.0309 (5)−0.0030 (5)0.0207 (5)
C70.0310 (5)0.0482 (6)0.0372 (6)−0.0030 (5)−0.0034 (4)0.0074 (5)
C110.0361 (5)0.0410 (6)0.0376 (6)0.0002 (4)0.0015 (4)0.0046 (5)
C90.0314 (5)0.0411 (6)0.0366 (5)−0.0003 (4)−0.0036 (4)0.0034 (5)
C40.0291 (5)0.0487 (6)0.0333 (5)−0.0018 (4)−0.0031 (4)0.0065 (5)
C150.0362 (6)0.0545 (7)0.0530 (7)−0.0033 (5)−0.0068 (5)0.0078 (6)
C100.0369 (6)0.0432 (6)0.0372 (6)−0.0014 (5)−0.0047 (5)0.0052 (5)
C140.0420 (6)0.0451 (7)0.0539 (7)−0.0085 (5)0.0047 (5)0.0049 (6)
C50.0282 (5)0.0493 (7)0.0414 (6)−0.0010 (5)−0.0013 (4)0.0077 (5)
C160.0383 (6)0.0495 (7)0.0481 (7)0.0010 (5)−0.0037 (5)0.0152 (6)
C30.0416 (6)0.0738 (9)0.0413 (6)−0.0025 (6)0.0023 (5)0.0203 (6)
C130.0590 (8)0.0550 (8)0.0468 (7)−0.0084 (6)−0.0006 (6)0.0184 (6)
C120.0471 (7)0.0560 (7)0.0389 (6)−0.0066 (6)−0.0049 (5)0.0098 (5)
C60.0469 (7)0.0505 (7)0.0573 (8)0.0049 (6)−0.0003 (6)0.0047 (6)
C20.0610 (8)0.0695 (10)0.0644 (9)−0.0146 (7)−0.0041 (7)0.0339 (8)
C10.0693 (9)0.0531 (8)0.0738 (10)0.0022 (7)−0.0094 (8)0.0216 (7)
O4—C71.3500 (15)C14—C131.371 (2)
O4—C41.4458 (13)C5—C61.5208 (19)
O3—C81.3463 (16)C5—H5A0.9700
O3—C41.4440 (15)C5—H5B0.9700
O2—C71.1972 (14)C16—H16A0.9300
O1—C81.2008 (15)C3—C21.524 (2)
C8—C91.4830 (16)C3—H3A0.9700
F1—C141.3511 (15)C3—H3B0.9700
C7—C91.4872 (16)C13—C121.3845 (19)
C11—C121.3922 (17)C13—H13A0.9300
C11—C161.3948 (17)C12—H12A0.9300
C11—C101.4635 (17)C6—C11.519 (2)
C9—C101.3411 (17)C6—H6A0.9700
C4—C31.5092 (18)C6—H6B0.9700
C4—C51.5138 (16)C2—C11.517 (2)
C15—C141.365 (2)C2—H2A0.9700
C15—C161.3827 (18)C2—H2B0.9700
C15—H15A0.9300C1—H1A0.9700
C10—H10A0.9300C1—H1B0.9700
C7—O4—C4118.46 (9)H5A—C5—H5B108.0
C8—O3—C4118.15 (9)C15—C16—C11120.91 (12)
O1—C8—O3119.04 (11)C15—C16—H16A119.5
O1—C8—C9124.97 (12)C11—C16—H16A119.5
O3—C8—C9115.69 (10)C4—C3—C2112.08 (12)
O2—C7—O4119.51 (11)C4—C3—H3A109.2
O2—C7—C9125.10 (12)C2—C3—H3A109.2
O4—C7—C9115.36 (9)C4—C3—H3B109.2
C12—C11—C16118.66 (11)C2—C3—H3B109.2
C12—C11—C10118.86 (11)H3A—C3—H3B107.9
C16—C11—C10122.37 (11)C14—C13—C12118.29 (13)
C10—C9—C8125.84 (11)C14—C13—H13A120.9
C10—C9—C7118.84 (10)C12—C13—H13A120.9
C8—C9—C7115.16 (11)C13—C12—C11120.75 (12)
O3—C4—O4108.60 (10)C13—C12—H12A119.6
O3—C4—C3106.43 (10)C11—C12—H12A119.6
O4—C4—C3106.66 (10)C1—C6—C5111.29 (12)
O3—C4—C5110.87 (10)C1—C6—H6A109.4
O4—C4—C5111.68 (9)C5—C6—H6A109.4
C3—C4—C5112.35 (11)C1—C6—H6B109.4
C14—C15—C16118.30 (12)C5—C6—H6B109.4
C14—C15—H15A120.8H6A—C6—H6B108.0
C16—C15—H15A120.8C1—C2—C3111.48 (13)
C9—C10—C11128.90 (11)C1—C2—H2A109.3
C9—C10—H10A115.6C3—C2—H2A109.3
C11—C10—H10A115.6C1—C2—H2B109.3
F1—C14—C15118.41 (12)C3—C2—H2B109.3
F1—C14—C13118.51 (13)H2A—C2—H2B108.0
C15—C14—C13123.08 (12)C2—C1—C6110.99 (13)
C4—C5—C6111.58 (11)C2—C1—H1A109.4
C4—C5—H5A109.3C6—C1—H1A109.4
C6—C5—H5A109.3C2—C1—H1B109.4
C4—C5—H5B109.3C6—C1—H1B109.4
C6—C5—H5B109.3H1A—C1—H1B108.0
D—H···AD—HH···AD···AD—H···A
C12—H12A···O2i0.932.473.3405 (17)156
C10—H10A···O20.932.542.874 (2)101
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C12—H12A⋯O2i0.932.473.3405 (17)156

Symmetry code: (i) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
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3.  3-[(5-Methyl-furan-2-yl)methyl-ene]-1,5-dioxaspiro-[5.5]undecane-2,4-dione.

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1.  3-(2,4-Dichloro-benzyl-idene)-1,5-dioxa-spiro-[5.5]undecane-2,4-dione.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-07

2.  Crystal structure of 5-[4-(di-ethyl-amino)-benzyl-idene]-2,2-dimethyl-1,3-dioxane-4,6-dione.

Authors:  Egija Stepina; Dmitrijs Stepanovs; Inese Mierina; Mara Jure
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