| Literature DB >> 21754546 |
Juliana Jumal, Abdul Razak Ibrahim, Bohari M Yamin.
Abstract
In the title compound, C(22)H(24)N(4)O(2)S(2), the two thio-urea segments of the side-arm groups are inclined at a dihedral angle of 73.09 (9)°. The central cyclo-hexane bridge adopts a chair conformation. The mol-ecule is stabilized by N-H⋯O intra-molecular hydrogen bonds forming S(6) rings, and N-H⋯O and N-H⋯S inter-molecular hydrogen bonds forming infinite chains developing parallel to the b axis.Entities:
Year: 2011 PMID: 21754546 PMCID: PMC3089146 DOI: 10.1107/S1600536811014991
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C22H24N4O2S2 | |
| Monoclinic, | Melting point = 495.3–497.3 K |
| Hall symbol: -C 2yc | Mo |
| Cell parameters from 4375 reflections | |
| θ = 2.0–25.2° | |
| µ = 0.26 mm−1 | |
| β = 91.252 (9)° | |
| Block, colourless | |
| 0.45 × 0.39 × 0.20 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 4212 independent reflections |
| Radiation source: fine-focus sealed tube | 3334 reflections with |
| graphite | |
| Detector resolution: 83.66 pixels mm-1 | θmax = 25.5°, θmin = 2.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 16892 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4212 reflections | (Δ/σ)max = 0.001 |
| 272 parameters | Δρmax = 0.37 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.02397 (4) | 0.38387 (8) | 0.42308 (5) | 0.0633 (3) | |
| S2 | 0.02746 (4) | 0.92533 (8) | 0.41333 (4) | 0.0586 (3) | |
| O1 | −0.09838 (10) | 0.7174 (2) | 0.36607 (12) | 0.0702 (7) | |
| O2 | 0.14844 (9) | 0.71111 (18) | 0.56241 (9) | 0.0492 (5) | |
| N1 | −0.07970 (10) | 0.5330 (2) | 0.41058 (11) | 0.0468 (6) | |
| H1A | −0.1004 | 0.4730 | 0.4279 | 0.056* | |
| N2 | 0.02222 (10) | 0.6069 (2) | 0.37479 (11) | 0.0454 (6) | |
| H2A | 0.0001 | 0.6723 | 0.3664 | 0.054* | |
| N3 | 0.12087 (11) | 0.7590 (2) | 0.43944 (10) | 0.0450 (6) | |
| H3A | 0.1456 | 0.7217 | 0.4678 | 0.054* | |
| N4 | 0.08148 (11) | 0.86601 (19) | 0.52667 (10) | 0.0410 (5) | |
| H4A | 0.0591 | 0.9281 | 0.5394 | 0.049* | |
| C1 | −0.21028 (19) | 0.5515 (3) | 0.4688 (2) | 0.0898 (13) | |
| H1B | −0.1791 | 0.4990 | 0.4881 | 0.108* | |
| C2 | −0.2756 (2) | 0.5544 (4) | 0.4898 (3) | 0.124 (2) | |
| H2B | −0.2884 | 0.5035 | 0.5231 | 0.149* | |
| C3 | −0.32249 (19) | 0.6311 (5) | 0.4623 (3) | 0.1007 (17) | |
| H3B | −0.3668 | 0.6324 | 0.4767 | 0.121* | |
| C4 | −0.3036 (2) | 0.7045 (5) | 0.4142 (2) | 0.1030 (17) | |
| H4B | −0.3352 | 0.7564 | 0.3951 | 0.124* | |
| C5 | −0.23709 (17) | 0.7038 (4) | 0.39271 (18) | 0.0871 (13) | |
| H5A | −0.2245 | 0.7565 | 0.3601 | 0.104* | |
| C6 | −0.19050 (14) | 0.6265 (3) | 0.41907 (15) | 0.0523 (8) | |
| C7 | −0.11937 (14) | 0.6315 (3) | 0.39623 (14) | 0.0477 (7) | |
| C8 | −0.01047 (13) | 0.5160 (3) | 0.40108 (13) | 0.0440 (6) | |
| C9 | 0.09410 (13) | 0.6023 (3) | 0.35922 (13) | 0.0446 (6) | |
| H9A | 0.1160 | 0.5420 | 0.3874 | 0.054* | |
| C10 | 0.10317 (15) | 0.5628 (3) | 0.28926 (15) | 0.0606 (8) | |
| H10A | 0.0819 | 0.4846 | 0.2825 | 0.073* | |
| H10B | 0.0810 | 0.6205 | 0.2605 | 0.073* | |
| C11 | 0.17797 (17) | 0.5547 (4) | 0.27354 (17) | 0.0723 (10) | |
| H11A | 0.1993 | 0.4919 | 0.2997 | 0.087* | |
| H11B | 0.1827 | 0.5330 | 0.2285 | 0.087* | |
| C12 | 0.21279 (16) | 0.6735 (4) | 0.28648 (16) | 0.0701 (10) | |
| H12A | 0.1947 | 0.7342 | 0.2570 | 0.084* | |
| H12B | 0.2609 | 0.6652 | 0.2786 | 0.084* | |
| C13 | 0.20305 (14) | 0.7155 (4) | 0.35590 (15) | 0.0631 (9) | |
| H13A | 0.2238 | 0.7944 | 0.3619 | 0.076* | |
| H13B | 0.2255 | 0.6594 | 0.3853 | 0.076* | |
| C14 | 0.12781 (12) | 0.7232 (3) | 0.37194 (12) | 0.0434 (6) | |
| H14A | 0.1061 | 0.7845 | 0.3442 | 0.052* | |
| C15 | 0.07964 (13) | 0.8440 (2) | 0.46047 (12) | 0.0419 (6) | |
| C16 | 0.11438 (12) | 0.8012 (2) | 0.57403 (13) | 0.0398 (6) | |
| C17 | 0.10748 (12) | 0.8470 (3) | 0.64079 (13) | 0.0419 (6) | |
| C18 | 0.10957 (15) | 0.9688 (3) | 0.65517 (14) | 0.0526 (7) | |
| H18A | 0.1143 | 1.0253 | 0.6223 | 0.063* | |
| C19 | 0.10464 (18) | 1.0065 (3) | 0.71809 (17) | 0.0713 (10) | |
| H19A | 0.1066 | 1.0886 | 0.7278 | 0.086* | |
| C20 | 0.09689 (18) | 0.9240 (4) | 0.76659 (17) | 0.0742 (10) | |
| H20A | 0.0933 | 0.9504 | 0.8090 | 0.089* | |
| C21 | 0.09432 (17) | 0.8037 (4) | 0.75319 (15) | 0.0673 (9) | |
| H21A | 0.0884 | 0.7482 | 0.7863 | 0.081* | |
| C22 | 0.10055 (15) | 0.7639 (3) | 0.69031 (14) | 0.0546 (8) | |
| H22A | 0.1001 | 0.6815 | 0.6813 | 0.065* |
| S1 | 0.0446 (4) | 0.0520 (5) | 0.0936 (7) | 0.0080 (3) | 0.0057 (4) | 0.0092 (4) |
| S2 | 0.0634 (5) | 0.0719 (6) | 0.0406 (4) | 0.0246 (4) | 0.0012 (3) | 0.0038 (4) |
| O1 | 0.0475 (12) | 0.0653 (15) | 0.0982 (18) | 0.0125 (11) | 0.0131 (12) | 0.0236 (13) |
| O2 | 0.0491 (11) | 0.0522 (12) | 0.0463 (11) | 0.0115 (9) | −0.0001 (9) | −0.0018 (9) |
| N1 | 0.0325 (11) | 0.0479 (13) | 0.0602 (15) | 0.0014 (10) | 0.0076 (10) | 0.0023 (11) |
| N2 | 0.0320 (11) | 0.0500 (13) | 0.0544 (14) | 0.0050 (10) | 0.0054 (10) | 0.0016 (11) |
| N3 | 0.0399 (12) | 0.0545 (14) | 0.0405 (13) | 0.0060 (11) | 0.0009 (10) | −0.0002 (11) |
| N4 | 0.0438 (12) | 0.0408 (12) | 0.0387 (12) | 0.0064 (10) | 0.0041 (9) | 0.0007 (10) |
| C1 | 0.067 (2) | 0.060 (2) | 0.144 (4) | 0.0126 (18) | 0.050 (2) | 0.012 (2) |
| C2 | 0.086 (3) | 0.073 (3) | 0.217 (6) | 0.002 (2) | 0.090 (4) | 0.002 (3) |
| C3 | 0.045 (2) | 0.112 (4) | 0.147 (5) | −0.008 (2) | 0.030 (2) | −0.065 (3) |
| C4 | 0.051 (2) | 0.175 (5) | 0.083 (3) | 0.042 (3) | −0.009 (2) | −0.032 (3) |
| C5 | 0.053 (2) | 0.141 (4) | 0.067 (2) | 0.036 (2) | 0.0017 (17) | 0.002 (2) |
| C6 | 0.0376 (15) | 0.0555 (18) | 0.064 (2) | 0.0017 (13) | 0.0041 (13) | −0.0204 (15) |
| C7 | 0.0389 (14) | 0.0502 (18) | 0.0541 (18) | 0.0014 (13) | 0.0022 (13) | −0.0044 (14) |
| C8 | 0.0365 (13) | 0.0499 (16) | 0.0456 (16) | 0.0021 (12) | 0.0004 (11) | −0.0064 (13) |
| C9 | 0.0335 (13) | 0.0547 (17) | 0.0459 (16) | 0.0058 (12) | 0.0061 (11) | −0.0004 (13) |
| C10 | 0.0539 (18) | 0.072 (2) | 0.0557 (19) | 0.0005 (16) | 0.0075 (14) | −0.0163 (16) |
| C11 | 0.060 (2) | 0.100 (3) | 0.057 (2) | 0.018 (2) | 0.0176 (16) | −0.0145 (19) |
| C12 | 0.0414 (16) | 0.111 (3) | 0.059 (2) | 0.0034 (18) | 0.0204 (14) | −0.005 (2) |
| C13 | 0.0391 (16) | 0.093 (3) | 0.0574 (19) | −0.0060 (16) | 0.0096 (13) | −0.0071 (18) |
| C14 | 0.0352 (13) | 0.0594 (18) | 0.0358 (14) | 0.0029 (12) | 0.0063 (11) | −0.0006 (13) |
| C15 | 0.0370 (13) | 0.0480 (16) | 0.0411 (15) | −0.0013 (12) | 0.0077 (11) | 0.0026 (13) |
| C16 | 0.0327 (13) | 0.0414 (15) | 0.0453 (15) | −0.0023 (11) | 0.0028 (11) | 0.0035 (12) |
| C17 | 0.0343 (13) | 0.0500 (16) | 0.0413 (15) | 0.0019 (12) | −0.0009 (11) | 0.0017 (13) |
| C18 | 0.0573 (17) | 0.0518 (18) | 0.0485 (17) | 0.0038 (14) | −0.0049 (13) | −0.0018 (14) |
| C19 | 0.089 (3) | 0.064 (2) | 0.061 (2) | 0.0148 (19) | −0.0099 (18) | −0.0170 (18) |
| C20 | 0.082 (2) | 0.096 (3) | 0.0451 (19) | 0.016 (2) | 0.0042 (17) | −0.018 (2) |
| C21 | 0.073 (2) | 0.088 (3) | 0.0418 (18) | −0.0025 (19) | 0.0034 (15) | 0.0087 (17) |
| C22 | 0.0590 (18) | 0.0589 (19) | 0.0457 (17) | −0.0045 (15) | −0.0003 (14) | 0.0005 (15) |
| S1—C8 | 1.670 (3) | C9—C14 | 1.513 (4) |
| S2—C15 | 1.666 (3) | C9—C10 | 1.527 (4) |
| O1—C7 | 1.215 (3) | C9—H9A | 0.9800 |
| O2—C16 | 1.228 (3) | C10—C11 | 1.521 (4) |
| N1—C7 | 1.370 (4) | C10—H10A | 0.9700 |
| N1—C8 | 1.397 (3) | C10—H10B | 0.9700 |
| N1—H1A | 0.8600 | C11—C12 | 1.504 (5) |
| N2—C8 | 1.318 (3) | C11—H11A | 0.9700 |
| N2—C9 | 1.462 (3) | C11—H11B | 0.9700 |
| N2—H2A | 0.8600 | C12—C13 | 1.526 (4) |
| N3—C15 | 1.323 (3) | C12—H12A | 0.9700 |
| N3—C14 | 1.462 (3) | C12—H12B | 0.9700 |
| N3—H3A | 0.8600 | C13—C14 | 1.530 (4) |
| N4—C16 | 1.366 (3) | C13—H13A | 0.9700 |
| N4—C15 | 1.392 (3) | C13—H13B | 0.9700 |
| N4—H4A | 0.8600 | C14—H14A | 0.9800 |
| C1—C2 | 1.369 (5) | C16—C17 | 1.481 (4) |
| C1—C6 | 1.385 (5) | C17—C18 | 1.379 (4) |
| C1—H1B | 0.9300 | C17—C22 | 1.386 (4) |
| C2—C3 | 1.369 (7) | C18—C19 | 1.373 (4) |
| C2—H2B | 0.9300 | C18—H18A | 0.9300 |
| C3—C4 | 1.342 (7) | C19—C20 | 1.367 (5) |
| C3—H3B | 0.9300 | C19—H19A | 0.9300 |
| C4—C5 | 1.394 (5) | C20—C21 | 1.359 (5) |
| C4—H4B | 0.9300 | C20—H20A | 0.9300 |
| C5—C6 | 1.360 (5) | C21—C22 | 1.382 (4) |
| C5—H5A | 0.9300 | C21—H21A | 0.9300 |
| C6—C7 | 1.491 (4) | C22—H22A | 0.9300 |
| C7—N1—C8 | 129.2 (2) | C12—C11—C10 | 110.6 (3) |
| C7—N1—H1A | 115.4 | C12—C11—H11A | 109.5 |
| C8—N1—H1A | 115.4 | C10—C11—H11A | 109.5 |
| C8—N2—C9 | 123.4 (2) | C12—C11—H11B | 109.5 |
| C8—N2—H2A | 118.3 | C10—C11—H11B | 109.5 |
| C9—N2—H2A | 118.3 | H11A—C11—H11B | 108.1 |
| C15—N3—C14 | 125.3 (2) | C11—C12—C13 | 111.5 (3) |
| C15—N3—H3A | 117.4 | C11—C12—H12A | 109.3 |
| C14—N3—H3A | 117.4 | C13—C12—H12A | 109.3 |
| C16—N4—C15 | 128.1 (2) | C11—C12—H12B | 109.3 |
| C16—N4—H4A | 116.0 | C13—C12—H12B | 109.3 |
| C15—N4—H4A | 116.0 | H12A—C12—H12B | 108.0 |
| C2—C1—C6 | 120.2 (4) | C12—C13—C14 | 111.3 (2) |
| C2—C1—H1B | 119.9 | C12—C13—H13A | 109.4 |
| C6—C1—H1B | 119.9 | C14—C13—H13A | 109.4 |
| C1—C2—C3 | 121.0 (5) | C12—C13—H13B | 109.4 |
| C1—C2—H2B | 119.5 | C14—C13—H13B | 109.4 |
| C3—C2—H2B | 119.5 | H13A—C13—H13B | 108.0 |
| C4—C3—C2 | 119.1 (4) | N3—C14—C9 | 110.8 (2) |
| C4—C3—H3B | 120.5 | N3—C14—C13 | 109.5 (2) |
| C2—C3—H3B | 120.5 | C9—C14—C13 | 109.8 (2) |
| C3—C4—C5 | 120.8 (4) | N3—C14—H14A | 108.9 |
| C3—C4—H4B | 119.6 | C9—C14—H14A | 108.9 |
| C5—C4—H4B | 119.6 | C13—C14—H14A | 108.9 |
| C6—C5—C4 | 120.5 (4) | N3—C15—N4 | 116.4 (2) |
| C6—C5—H5A | 119.8 | N3—C15—S2 | 124.6 (2) |
| C4—C5—H5A | 119.8 | N4—C15—S2 | 119.00 (19) |
| C5—C6—C1 | 118.4 (3) | O2—C16—N4 | 122.5 (2) |
| C5—C6—C7 | 118.8 (3) | O2—C16—C17 | 121.5 (2) |
| C1—C6—C7 | 122.7 (3) | N4—C16—C17 | 116.0 (2) |
| O1—C7—N1 | 122.3 (3) | C18—C17—C22 | 119.4 (3) |
| O1—C7—C6 | 121.7 (3) | C18—C17—C16 | 122.2 (3) |
| N1—C7—C6 | 116.0 (3) | C22—C17—C16 | 118.4 (3) |
| N2—C8—N1 | 116.4 (2) | C19—C18—C17 | 119.9 (3) |
| N2—C8—S1 | 125.4 (2) | C19—C18—H18A | 120.0 |
| N1—C8—S1 | 118.2 (2) | C17—C18—H18A | 120.0 |
| N2—C9—C14 | 110.8 (2) | C20—C19—C18 | 120.4 (3) |
| N2—C9—C10 | 110.7 (2) | C20—C19—H19A | 119.8 |
| C14—C9—C10 | 110.9 (2) | C18—C19—H19A | 119.8 |
| N2—C9—H9A | 108.1 | C21—C20—C19 | 120.4 (3) |
| C14—C9—H9A | 108.1 | C21—C20—H20A | 119.8 |
| C10—C9—H9A | 108.1 | C19—C20—H20A | 119.8 |
| C11—C10—C9 | 110.8 (2) | C20—C21—C22 | 120.0 (3) |
| C11—C10—H10A | 109.5 | C20—C21—H21A | 120.0 |
| C9—C10—H10A | 109.5 | C22—C21—H21A | 120.0 |
| C11—C10—H10B | 109.5 | C21—C22—C17 | 119.8 (3) |
| C9—C10—H10B | 109.5 | C21—C22—H22A | 120.1 |
| H10A—C10—H10B | 108.1 | C17—C22—H22A | 120.1 |
| C6—C1—C2—C3 | −0.2 (7) | C15—N3—C14—C13 | 132.9 (3) |
| C1—C2—C3—C4 | −0.2 (8) | N2—C9—C14—N3 | 58.4 (3) |
| C2—C3—C4—C5 | −0.5 (7) | C10—C9—C14—N3 | −178.2 (2) |
| C3—C4—C5—C6 | 1.5 (7) | N2—C9—C14—C13 | 179.4 (2) |
| C4—C5—C6—C1 | −1.8 (6) | C10—C9—C14—C13 | −57.2 (3) |
| C4—C5—C6—C7 | −178.0 (4) | C12—C13—C14—N3 | 177.7 (3) |
| C2—C1—C6—C5 | 1.2 (6) | C12—C13—C14—C9 | 55.9 (4) |
| C2—C1—C6—C7 | 177.2 (4) | C14—N3—C15—N4 | −178.8 (2) |
| C8—N1—C7—O1 | 7.3 (5) | C14—N3—C15—S2 | 0.5 (4) |
| C8—N1—C7—C6 | −173.5 (3) | C16—N4—C15—N3 | −8.8 (4) |
| C5—C6—C7—O1 | 16.3 (5) | C16—N4—C15—S2 | 171.9 (2) |
| C1—C6—C7—O1 | −159.7 (3) | C15—N4—C16—O2 | 0.5 (4) |
| C5—C6—C7—N1 | −162.9 (3) | C15—N4—C16—C17 | 179.7 (2) |
| C1—C6—C7—N1 | 21.1 (4) | O2—C16—C17—C18 | 138.7 (3) |
| C9—N2—C8—N1 | −177.5 (2) | N4—C16—C17—C18 | −40.5 (3) |
| C9—N2—C8—S1 | 2.1 (4) | O2—C16—C17—C22 | −39.6 (4) |
| C7—N1—C8—N2 | 0.2 (4) | N4—C16—C17—C22 | 141.3 (3) |
| C7—N1—C8—S1 | −179.4 (2) | C22—C17—C18—C19 | −0.1 (4) |
| C8—N2—C9—C14 | −143.0 (3) | C16—C17—C18—C19 | −178.4 (3) |
| C8—N2—C9—C10 | 93.5 (3) | C17—C18—C19—C20 | −0.7 (5) |
| N2—C9—C10—C11 | −178.4 (3) | C18—C19—C20—C21 | 0.3 (5) |
| C14—C9—C10—C11 | 58.1 (4) | C19—C20—C21—C22 | 0.9 (5) |
| C9—C10—C11—C12 | −56.7 (4) | C20—C21—C22—C17 | −1.8 (5) |
| C10—C11—C12—C13 | 55.7 (4) | C18—C17—C22—C21 | 1.4 (4) |
| C11—C12—C13—C14 | −55.7 (4) | C16—C17—C22—C21 | 179.7 (3) |
| C15—N3—C14—C9 | −105.9 (3) |
| H··· | ||||
| N2—H2A···O1 | 0.86 | 2.01 | 2.677 (3) | 134 |
| N3—H3A···O2 | 0.86 | 1.96 | 2.645 (3) | 136 |
| N1—H1A···O2i | 0.86 | 2.26 | 3.077 (3) | 159 |
| N4—H4A···S2ii | 0.86 | 2.56 | 3.405 (3) | 166 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 | 2.01 | 2.677 (3) | 134 |
| N3—H3 | 0.86 | 1.96 | 2.645 (3) | 136 |
| N1—H1 | 0.86 | 2.26 | 3.077 (3) | 159 |
| N4—H4 | 0.86 | 2.56 | 3.405 (3) | 166 |
Symmetry codes: (i) ; (ii) .