| Literature DB >> 21202418 |
M Sukeri M Yusof, Noor Adila C Ayob, Maisara A Kadir, Bohari M Yamin.
Abstract
In the title compound, C(18)H(32)N(4)O(2)S(2), the dihedral angle between the two thio-urea groups is 78.55 (7)°. The mol-ecular conformation is stabilized by intra-molecular N-H⋯O hydrogen bonds and the crystal structure is stabilized by inter-molecular N-H⋯O and C-H⋯O hydrogen bonds, forming centrosymmetric dimers.Entities:
Year: 2008 PMID: 21202418 PMCID: PMC2961203 DOI: 10.1107/S1600536808011495
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H32N4O2S2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 982 reflections |
| θ = 1.9–25.0º | |
| µ = 0.27 mm−1 | |
| β = 96.112 (4)º | Block, colourless |
| 0.48 × 0.41 × 0.37 mm | |
| Bruker SMART APEX CCD area-detector diffractometer | 3779 independent reflections |
| Radiation source: fine-focus sealed tube | 2828 reflections with |
| Monochromator: graphite | |
| Detector resolution: 83.66 pixels mm-1 | θmax = 25.0º |
| θmin = 1.9º | |
| ω scans | |
| Absorption correction: multi-scan(SADABS; Bruker, 2000) | |
| 10928 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max = 0.001 | |
| 3779 reflections | Δρmax = 0.30 e Å−3 |
| 241 parameters | Δρmin = −0.22 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.12804 (6) | 0.05301 (3) | −0.07986 (6) | 0.0544 (2) | |
| S2 | 0.03271 (6) | 0.10826 (4) | 0.56450 (6) | 0.0689 (2) | |
| O1 | 0.26724 (16) | −0.05371 (8) | 0.29928 (15) | 0.0566 (4) | |
| O2 | −0.21983 (13) | 0.10785 (8) | 0.19001 (14) | 0.0464 (4) | |
| N1 | 0.20717 (16) | −0.04742 (8) | 0.08323 (17) | 0.0424 (4) | |
| H1 | 0.1996 | −0.0721 | 0.0135 | 0.051* | |
| N2 | 0.18658 (16) | 0.06134 (8) | 0.17475 (17) | 0.0426 (4) | |
| H2 | 0.2023 | 0.0397 | 0.2473 | 0.051* | |
| N3 | 0.00442 (15) | 0.13012 (9) | 0.31031 (18) | 0.0435 (4) | |
| H3 | −0.0426 | 0.1273 | 0.2387 | 0.052* | |
| N4 | −0.15887 (16) | 0.08040 (10) | 0.39865 (18) | 0.0481 (5) | |
| H4 | −0.1840 | 0.0617 | 0.4664 | 0.058* | |
| C1 | 0.1676 (3) | −0.19515 (13) | 0.0914 (3) | 0.0723 (8) | |
| H1A | 0.1771 | −0.2452 | 0.0940 | 0.108* | |
| H1B | 0.1685 | −0.1790 | 0.0039 | 0.108* | |
| H1C | 0.0910 | −0.1827 | 0.1222 | 0.108* | |
| C2 | 0.2729 (2) | −0.16111 (11) | 0.1774 (2) | 0.0468 (5) | |
| C3 | 0.24848 (19) | −0.08288 (11) | 0.1939 (2) | 0.0415 (5) | |
| C4 | 0.17546 (18) | 0.02355 (11) | 0.0674 (2) | 0.0396 (5) | |
| C5 | 0.17396 (18) | 0.13730 (10) | 0.1781 (2) | 0.0391 (5) | |
| H5 | 0.1138 | 0.1516 | 0.1063 | 0.047* | |
| C6 | 0.2965 (2) | 0.17181 (11) | 0.1603 (2) | 0.0462 (5) | |
| H6A | 0.3591 | 0.1529 | 0.2239 | 0.055* | |
| H6B | 0.3190 | 0.1603 | 0.0749 | 0.055* | |
| C7 | 0.2932 (2) | 0.25092 (11) | 0.1746 (2) | 0.0523 (6) | |
| H7A | 0.3743 | 0.2701 | 0.1682 | 0.063* | |
| H7B | 0.2375 | 0.2708 | 0.1053 | 0.063* | |
| C8 | 0.2512 (2) | 0.27047 (12) | 0.3043 (2) | 0.0564 (6) | |
| H8A | 0.3100 | 0.2534 | 0.3736 | 0.068* | |
| H8B | 0.2469 | 0.3211 | 0.3115 | 0.068* | |
| C9 | 0.1265 (2) | 0.23904 (11) | 0.3176 (2) | 0.0480 (6) | |
| H9A | 0.0671 | 0.2586 | 0.2513 | 0.058* | |
| H9B | 0.1014 | 0.2516 | 0.4014 | 0.058* | |
| C10 | 0.12704 (18) | 0.15951 (10) | 0.3048 (2) | 0.0396 (5) | |
| H10 | 0.1819 | 0.1401 | 0.3767 | 0.048* | |
| C11 | −0.03989 (18) | 0.10766 (11) | 0.4159 (2) | 0.0421 (5) | |
| C12 | −0.24141 (18) | 0.07907 (11) | 0.2897 (2) | 0.0387 (5) | |
| C13 | −0.36266 (19) | 0.04254 (11) | 0.3039 (2) | 0.0436 (5) | |
| C14 | −0.3419 (2) | −0.03052 (14) | 0.3627 (3) | 0.0676 (8) | |
| H14A | −0.4196 | −0.0533 | 0.3662 | 0.101* | |
| H14B | −0.3006 | −0.0265 | 0.4487 | 0.101* | |
| H14C | −0.2926 | −0.0577 | 0.3101 | 0.101* | |
| C15 | 0.3909 (2) | −0.16947 (14) | 0.1128 (3) | 0.0769 (9) | |
| H15A | 0.4573 | −0.1469 | 0.1647 | 0.115* | |
| H15B | 0.3805 | −0.1484 | 0.0283 | 0.115* | |
| H15C | 0.4091 | −0.2184 | 0.1047 | 0.115* | |
| C16 | 0.2847 (4) | −0.19545 (14) | 0.3097 (3) | 0.1025 (13) | |
| H16A | 0.3535 | −0.1757 | 0.3624 | 0.154* | |
| H16B | 0.2971 | −0.2450 | 0.3004 | 0.154* | |
| H16C | 0.2112 | −0.1875 | 0.3502 | 0.154* | |
| C17 | −0.4349 (2) | 0.03560 (15) | 0.1708 (2) | 0.0607 (7) | |
| H17A | −0.4482 | 0.0813 | 0.1330 | 0.091* | |
| H17B | −0.5126 | 0.0138 | 0.1795 | 0.091* | |
| H17C | −0.3895 | 0.0073 | 0.1161 | 0.091* | |
| C18 | −0.4344 (2) | 0.08752 (15) | 0.3912 (3) | 0.0649 (7) | |
| H18A | −0.4380 | 0.1349 | 0.3598 | 0.097* | |
| H18B | −0.3941 | 0.0866 | 0.4780 | 0.097* | |
| H18C | −0.5161 | 0.0693 | 0.3907 | 0.097* |
| S1 | 0.0754 (4) | 0.0458 (4) | 0.0412 (3) | 0.0087 (3) | 0.0030 (3) | 0.0069 (3) |
| S2 | 0.0585 (4) | 0.0989 (6) | 0.0462 (4) | −0.0190 (4) | −0.0089 (3) | 0.0110 (3) |
| O1 | 0.0847 (12) | 0.0408 (9) | 0.0420 (10) | 0.0074 (8) | −0.0043 (8) | −0.0010 (7) |
| O2 | 0.0466 (9) | 0.0556 (9) | 0.0366 (9) | −0.0066 (7) | 0.0027 (6) | 0.0042 (7) |
| N1 | 0.0578 (11) | 0.0324 (9) | 0.0363 (10) | 0.0027 (8) | 0.0014 (8) | −0.0020 (8) |
| N2 | 0.0563 (11) | 0.0337 (9) | 0.0376 (10) | 0.0042 (8) | 0.0039 (8) | 0.0023 (8) |
| N3 | 0.0363 (9) | 0.0525 (11) | 0.0411 (11) | −0.0040 (8) | 0.0011 (8) | −0.0005 (8) |
| N4 | 0.0415 (10) | 0.0599 (12) | 0.0423 (11) | −0.0091 (9) | 0.0012 (8) | 0.0127 (9) |
| C1 | 0.0789 (19) | 0.0417 (14) | 0.096 (2) | −0.0145 (13) | 0.0081 (16) | −0.0041 (14) |
| C2 | 0.0633 (15) | 0.0318 (11) | 0.0454 (13) | 0.0014 (10) | 0.0067 (11) | 0.0026 (10) |
| C3 | 0.0472 (12) | 0.0355 (11) | 0.0416 (13) | −0.0012 (9) | 0.0045 (10) | 0.0017 (10) |
| C4 | 0.0414 (12) | 0.0351 (11) | 0.0431 (13) | 0.0009 (9) | 0.0080 (9) | 0.0011 (9) |
| C5 | 0.0413 (11) | 0.0320 (11) | 0.0437 (12) | 0.0075 (9) | 0.0031 (9) | 0.0018 (9) |
| C6 | 0.0430 (12) | 0.0453 (12) | 0.0514 (14) | 0.0050 (10) | 0.0094 (10) | −0.0004 (10) |
| C7 | 0.0501 (13) | 0.0433 (13) | 0.0645 (16) | −0.0060 (10) | 0.0108 (11) | 0.0003 (11) |
| C8 | 0.0619 (15) | 0.0435 (13) | 0.0646 (16) | −0.0077 (11) | 0.0103 (12) | −0.0097 (12) |
| C9 | 0.0486 (13) | 0.0422 (12) | 0.0543 (14) | 0.0061 (10) | 0.0105 (11) | −0.0072 (11) |
| C10 | 0.0326 (11) | 0.0402 (12) | 0.0456 (13) | 0.0005 (9) | 0.0019 (9) | −0.0014 (10) |
| C11 | 0.0402 (12) | 0.0401 (12) | 0.0456 (13) | −0.0009 (9) | 0.0025 (10) | 0.0032 (10) |
| C12 | 0.0417 (12) | 0.0366 (11) | 0.0377 (12) | 0.0042 (9) | 0.0044 (9) | −0.0012 (9) |
| C13 | 0.0362 (11) | 0.0522 (13) | 0.0426 (13) | −0.0029 (10) | 0.0058 (9) | 0.0025 (10) |
| C14 | 0.0560 (15) | 0.0608 (16) | 0.086 (2) | −0.0131 (13) | 0.0092 (14) | 0.0163 (15) |
| C15 | 0.0644 (17) | 0.0511 (15) | 0.117 (3) | 0.0140 (13) | 0.0166 (17) | 0.0041 (16) |
| C16 | 0.214 (4) | 0.0405 (15) | 0.0529 (18) | 0.0181 (19) | 0.011 (2) | 0.0113 (13) |
| C17 | 0.0458 (13) | 0.0868 (18) | 0.0492 (15) | −0.0151 (13) | 0.0037 (11) | −0.0059 (13) |
| C18 | 0.0494 (14) | 0.088 (2) | 0.0584 (17) | 0.0067 (13) | 0.0092 (12) | −0.0083 (14) |
| S1—C4 | 1.659 (2) | C7—C8 | 1.515 (3) |
| S2—C11 | 1.658 (2) | C7—H7A | 0.9700 |
| O1—C3 | 1.224 (2) | C7—H7B | 0.9700 |
| O2—C12 | 1.217 (2) | C8—C9 | 1.512 (3) |
| N1—C3 | 1.368 (3) | C8—H8A | 0.9700 |
| N1—C4 | 1.402 (3) | C8—H8B | 0.9700 |
| N1—H1 | 0.8600 | C9—C10 | 1.522 (3) |
| N2—C4 | 1.322 (3) | C9—H9A | 0.9700 |
| N2—C5 | 1.455 (2) | C9—H9B | 0.9700 |
| N2—H2 | 0.8600 | C10—H10 | 0.9800 |
| N3—C11 | 1.317 (3) | C12—C13 | 1.521 (3) |
| N3—C10 | 1.463 (3) | C13—C17 | 1.522 (3) |
| N3—H3 | 0.8600 | C13—C18 | 1.525 (3) |
| N4—C12 | 1.371 (3) | C13—C14 | 1.528 (3) |
| N4—C11 | 1.397 (3) | C14—H14A | 0.9600 |
| N4—H4 | 0.8600 | C14—H14B | 0.9600 |
| C1—C2 | 1.526 (4) | C14—H14C | 0.9600 |
| C1—H1A | 0.9600 | C15—H15A | 0.9600 |
| C1—H1B | 0.9600 | C15—H15B | 0.9600 |
| C1—H1C | 0.9600 | C15—H15C | 0.9600 |
| C2—C16 | 1.514 (3) | C16—H16A | 0.9600 |
| C2—C15 | 1.528 (4) | C16—H16B | 0.9600 |
| C2—C3 | 1.528 (3) | C16—H16C | 0.9600 |
| C5—C10 | 1.522 (3) | C17—H17A | 0.9600 |
| C5—C6 | 1.524 (3) | C17—H17B | 0.9600 |
| C5—H5 | 0.9800 | C17—H17C | 0.9600 |
| C6—C7 | 1.516 (3) | C18—H18A | 0.9600 |
| C6—H6A | 0.9700 | C18—H18B | 0.9600 |
| C6—H6B | 0.9700 | C18—H18C | 0.9600 |
| C3—N1—C4 | 129.13 (18) | C8—C9—C10 | 112.04 (18) |
| C3—N1—H1 | 115.4 | C8—C9—H9A | 109.2 |
| C4—N1—H1 | 115.4 | C10—C9—H9A | 109.2 |
| C4—N2—C5 | 124.21 (18) | C8—C9—H9B | 109.2 |
| C4—N2—H2 | 117.9 | C10—C9—H9B | 109.2 |
| C5—N2—H2 | 117.9 | H9A—C9—H9B | 107.9 |
| C11—N3—C10 | 125.39 (18) | N3—C10—C5 | 108.89 (16) |
| C11—N3—H3 | 117.3 | N3—C10—C9 | 111.49 (16) |
| C10—N3—H3 | 117.3 | C5—C10—C9 | 110.94 (17) |
| C12—N4—C11 | 129.61 (18) | N3—C10—H10 | 108.5 |
| C12—N4—H4 | 115.2 | C5—C10—H10 | 108.5 |
| C11—N4—H4 | 115.2 | C9—C10—H10 | 108.5 |
| C2—C1—H1A | 109.5 | N3—C11—N4 | 115.86 (18) |
| C2—C1—H1B | 109.5 | N3—C11—S2 | 126.07 (16) |
| H1A—C1—H1B | 109.5 | N4—C11—S2 | 118.07 (16) |
| C2—C1—H1C | 109.5 | O2—C12—N4 | 121.47 (19) |
| H1A—C1—H1C | 109.5 | O2—C12—C13 | 122.65 (18) |
| H1B—C1—H1C | 109.5 | N4—C12—C13 | 115.82 (18) |
| C16—C2—C1 | 109.5 (2) | C12—C13—C17 | 109.11 (18) |
| C16—C2—C15 | 111.0 (2) | C12—C13—C18 | 108.09 (19) |
| C1—C2—C15 | 108.7 (2) | C17—C13—C18 | 109.67 (19) |
| C16—C2—C3 | 108.65 (19) | C12—C13—C14 | 111.20 (17) |
| C1—C2—C3 | 110.51 (19) | C17—C13—C14 | 108.9 (2) |
| C15—C2—C3 | 108.50 (18) | C18—C13—C14 | 109.9 (2) |
| O1—C3—N1 | 122.32 (19) | C13—C14—H14A | 109.5 |
| O1—C3—C2 | 121.91 (19) | C13—C14—H14B | 109.5 |
| N1—C3—C2 | 115.75 (18) | H14A—C14—H14B | 109.5 |
| N2—C4—N1 | 115.32 (18) | C13—C14—H14C | 109.5 |
| N2—C4—S1 | 125.71 (16) | H14A—C14—H14C | 109.5 |
| N1—C4—S1 | 118.96 (16) | H14B—C14—H14C | 109.5 |
| N2—C5—C10 | 109.84 (16) | C2—C15—H15A | 109.5 |
| N2—C5—C6 | 109.84 (16) | C2—C15—H15B | 109.5 |
| C10—C5—C6 | 111.57 (17) | H15A—C15—H15B | 109.5 |
| N2—C5—H5 | 108.5 | C2—C15—H15C | 109.5 |
| C10—C5—H5 | 108.5 | H15A—C15—H15C | 109.5 |
| C6—C5—H5 | 108.5 | H15B—C15—H15C | 109.5 |
| C7—C6—C5 | 112.79 (17) | C2—C16—H16A | 109.5 |
| C7—C6—H6A | 109.0 | C2—C16—H16B | 109.5 |
| C5—C6—H6A | 109.0 | H16A—C16—H16B | 109.5 |
| C7—C6—H6B | 109.0 | C2—C16—H16C | 109.5 |
| C5—C6—H6B | 109.0 | H16A—C16—H16C | 109.5 |
| H6A—C6—H6B | 107.8 | H16B—C16—H16C | 109.5 |
| C8—C7—C6 | 110.14 (19) | C13—C17—H17A | 109.5 |
| C8—C7—H7A | 109.6 | C13—C17—H17B | 109.5 |
| C6—C7—H7A | 109.6 | H17A—C17—H17B | 109.5 |
| C8—C7—H7B | 109.6 | C13—C17—H17C | 109.5 |
| C6—C7—H7B | 109.6 | H17A—C17—H17C | 109.5 |
| H7A—C7—H7B | 108.1 | H17B—C17—H17C | 109.5 |
| C9—C8—C7 | 110.28 (19) | C13—C18—H18A | 109.5 |
| C9—C8—H8A | 109.6 | C13—C18—H18B | 109.5 |
| C7—C8—H8A | 109.6 | H18A—C18—H18B | 109.5 |
| C9—C8—H8B | 109.6 | C13—C18—H18C | 109.5 |
| C7—C8—H8B | 109.6 | H18A—C18—H18C | 109.5 |
| H8A—C8—H8B | 108.1 | H18B—C18—H18C | 109.5 |
| H··· | ||||
| N2—H2···O1 | 0.86 | 1.97 | 2.650 (2) | 135 |
| N3—H3···O2 | 0.86 | 1.99 | 2.670 (2) | 135 |
| N1—H1···O2i | 0.86 | 2.25 | 3.078 (2) | 161 |
| C1—H1B···O2i | 0.96 | 2.54 | 3.462 (3) | 161 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O1 | 0.86 | 1.97 | 2.650 (2) | 135 |
| N3—H3⋯O2 | 0.86 | 1.99 | 2.670 (2) | 135 |
| N1—H1⋯O2i | 0.86 | 2.25 | 3.078 (2) | 161 |
| C1—H1 | 0.96 | 2.54 | 3.462 (3) | 161 |
Symmetry code: (i) .