| Literature DB >> 21754469 |
Sohail Saeed, Naghmana Rashid, Muhammad Sher, Seik Weng Ng, Edward R T Tiekink.
Abstract
The title thio-urea derivative, C(14)H(18)N(4)O(5)S, features two substantial twists between its component fragments: the dihedral angle between the SN(2)C (thio-urea) and ONC(2) (amide) residues is 48.89 (7)° and that between the benzene ring and the amide residue is 30.27 (7)°. In the crystal, mol-ecules are linked by bifurcated N-H⋯(O,S) hydrogen bonds, generating [001] supra-molecular chains.Entities:
Year: 2011 PMID: 21754469 PMCID: PMC3089134 DOI: 10.1107/S1600536811013638
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H18N4O5S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3443 reflections |
| θ = 2.3–29.3° | |
| µ = 0.23 mm−1 | |
| β = 94.379 (4)° | Prism, light yellow |
| 0.30 × 0.20 × 0.10 mm | |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 3614 independent reflections |
| Radiation source: SuperNova (Mo) X-ray Source | 2878 reflections with |
| Mirror | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 27.5°, θmin = 2.3° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 8055 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3614 reflections | (Δ/σ)max = 0.001 |
| 221 parameters | Δρmax = 1.04 e Å−3 |
| 1 restraint | Δρmin = −0.46 e Å−3 |
| S1 | 0.37257 (8) | 0.21276 (3) | 0.24866 (6) | 0.0405 (2) | |
| O1 | 0.7561 (2) | 0.24758 (9) | 0.29218 (19) | 0.0505 (5) | |
| O2 | 0.5844 (3) | 0.44242 (11) | 0.7375 (2) | 0.0621 (6) | |
| O3 | 0.8149 (3) | 0.49393 (11) | 0.7748 (3) | 0.0761 (7) | |
| O4 | 1.2906 (3) | 0.44304 (11) | 0.5156 (3) | 0.0711 (7) | |
| O5 | 1.3052 (3) | 0.35161 (11) | 0.4221 (2) | 0.0623 (6) | |
| N1 | 0.4129 (2) | 0.15013 (9) | 0.4887 (2) | 0.0334 (4) | |
| N2 | 0.5882 (3) | 0.23606 (9) | 0.4730 (2) | 0.0343 (4) | |
| H2 | 0.581 (3) | 0.2455 (12) | 0.5607 (13) | 0.044 (7)* | |
| N3 | 0.7311 (3) | 0.45149 (10) | 0.7190 (2) | 0.0451 (5) | |
| N4 | 1.2306 (3) | 0.39224 (11) | 0.4807 (2) | 0.0440 (5) | |
| C1 | 0.2706 (3) | 0.10939 (12) | 0.4387 (3) | 0.0433 (6) | |
| H1A | 0.2787 | 0.0701 | 0.4899 | 0.052* | |
| H1B | 0.2802 | 0.0999 | 0.3408 | 0.052* | |
| C2 | 0.0973 (4) | 0.1384 (2) | 0.4550 (4) | 0.0746 (10) | |
| H2A | 0.0819 | 0.1733 | 0.3903 | 0.089* | |
| H2B | 0.0117 | 0.1073 | 0.4280 | 0.089* | |
| C3 | 0.0687 (5) | 0.1608 (2) | 0.5930 (5) | 0.0882 (13) | |
| H3A | −0.0414 | 0.1795 | 0.5919 | 0.132* | |
| H3B | 0.1528 | 0.1915 | 0.6217 | 0.132* | |
| H3C | 0.0757 | 0.1262 | 0.6574 | 0.132* | |
| C4 | 0.5096 (3) | 0.12842 (12) | 0.6168 (2) | 0.0396 (6) | |
| H4A | 0.4329 | 0.1098 | 0.6791 | 0.047* | |
| H4B | 0.5640 | 0.1641 | 0.6642 | 0.047* | |
| C5 | 0.6417 (4) | 0.08077 (13) | 0.5847 (3) | 0.0510 (7) | |
| H5A | 0.7223 | 0.1002 | 0.5270 | 0.061* | |
| H5B | 0.5880 | 0.0464 | 0.5318 | 0.061* | |
| C6 | 0.7351 (4) | 0.05486 (15) | 0.7163 (4) | 0.0659 (9) | |
| H6A | 0.8211 | 0.0262 | 0.6912 | 0.099* | |
| H6B | 0.6569 | 0.0332 | 0.7708 | 0.099* | |
| H6C | 0.7862 | 0.0888 | 0.7701 | 0.099* | |
| C7 | 0.4603 (3) | 0.19711 (10) | 0.4084 (2) | 0.0313 (5) | |
| C8 | 0.7150 (3) | 0.26338 (11) | 0.4063 (2) | 0.0339 (5) | |
| C9 | 0.8066 (3) | 0.31654 (10) | 0.4830 (2) | 0.0320 (5) | |
| C10 | 0.7262 (3) | 0.35735 (11) | 0.5703 (2) | 0.0337 (5) | |
| H10 | 0.6152 | 0.3502 | 0.5908 | 0.040* | |
| C11 | 0.8147 (3) | 0.40847 (11) | 0.6256 (2) | 0.0350 (5) | |
| C12 | 0.9793 (3) | 0.42129 (11) | 0.5982 (2) | 0.0367 (5) | |
| H12 | 1.0361 | 0.4564 | 0.6352 | 0.044* | |
| C13 | 1.0552 (3) | 0.37937 (11) | 0.5132 (2) | 0.0353 (5) | |
| C14 | 0.9729 (3) | 0.32754 (11) | 0.4549 (2) | 0.0338 (5) | |
| H14 | 1.0280 | 0.3004 | 0.3976 | 0.041* |
| S1 | 0.0449 (4) | 0.0445 (4) | 0.0315 (3) | −0.0042 (3) | −0.0021 (2) | 0.0030 (2) |
| O1 | 0.0508 (11) | 0.0646 (12) | 0.0378 (10) | −0.0172 (9) | 0.0146 (8) | −0.0188 (9) |
| O2 | 0.0525 (12) | 0.0665 (14) | 0.0695 (14) | 0.0005 (10) | 0.0182 (10) | −0.0207 (11) |
| O3 | 0.0734 (15) | 0.0652 (14) | 0.0909 (17) | −0.0130 (12) | 0.0146 (13) | −0.0475 (13) |
| O4 | 0.0519 (12) | 0.0681 (15) | 0.0941 (18) | −0.0262 (11) | 0.0118 (12) | −0.0156 (13) |
| O5 | 0.0438 (11) | 0.0814 (15) | 0.0636 (13) | −0.0046 (10) | 0.0156 (10) | −0.0176 (12) |
| N1 | 0.0346 (10) | 0.0325 (10) | 0.0331 (10) | −0.0015 (8) | 0.0025 (8) | −0.0001 (8) |
| N2 | 0.0410 (11) | 0.0364 (10) | 0.0259 (9) | −0.0079 (8) | 0.0048 (8) | −0.0052 (8) |
| N3 | 0.0514 (14) | 0.0432 (12) | 0.0409 (12) | 0.0023 (10) | 0.0037 (10) | −0.0077 (10) |
| N4 | 0.0355 (11) | 0.0570 (14) | 0.0393 (11) | −0.0067 (10) | 0.0005 (9) | 0.0007 (10) |
| C1 | 0.0423 (14) | 0.0389 (13) | 0.0486 (14) | −0.0094 (11) | 0.0036 (11) | −0.0017 (11) |
| C2 | 0.0510 (18) | 0.097 (3) | 0.076 (2) | −0.0187 (18) | 0.0090 (16) | −0.015 (2) |
| C3 | 0.059 (2) | 0.102 (3) | 0.107 (3) | −0.015 (2) | 0.022 (2) | −0.040 (3) |
| C4 | 0.0476 (14) | 0.0394 (13) | 0.0317 (12) | −0.0022 (11) | 0.0031 (10) | 0.0047 (10) |
| C5 | 0.0528 (16) | 0.0482 (15) | 0.0500 (16) | 0.0068 (13) | −0.0093 (13) | −0.0058 (12) |
| C6 | 0.072 (2) | 0.0484 (17) | 0.072 (2) | 0.0038 (15) | −0.0257 (17) | 0.0032 (15) |
| C7 | 0.0323 (11) | 0.0305 (11) | 0.0315 (11) | 0.0008 (9) | 0.0055 (9) | −0.0042 (9) |
| C8 | 0.0363 (12) | 0.0348 (12) | 0.0308 (11) | −0.0036 (9) | 0.0035 (9) | −0.0035 (9) |
| C9 | 0.0362 (12) | 0.0337 (11) | 0.0259 (10) | −0.0029 (9) | 0.0015 (9) | 0.0012 (9) |
| C10 | 0.0353 (12) | 0.0372 (12) | 0.0285 (11) | −0.0025 (10) | 0.0019 (9) | 0.0023 (9) |
| C11 | 0.0398 (13) | 0.0344 (12) | 0.0304 (11) | 0.0023 (10) | 0.0006 (9) | −0.0022 (9) |
| C12 | 0.0424 (13) | 0.0351 (12) | 0.0318 (11) | −0.0063 (10) | −0.0024 (10) | −0.0029 (9) |
| C13 | 0.0341 (12) | 0.0416 (13) | 0.0299 (11) | −0.0042 (10) | 0.0002 (9) | 0.0037 (9) |
| C14 | 0.0364 (12) | 0.0363 (12) | 0.0290 (11) | 0.0003 (10) | 0.0040 (9) | −0.0005 (9) |
| S1—C7 | 1.668 (2) | C3—H3B | 0.9600 |
| O1—C8 | 1.214 (3) | C3—H3C | 0.9600 |
| O2—N3 | 1.207 (3) | C4—C5 | 1.508 (4) |
| O3—N3 | 1.221 (3) | C4—H4A | 0.9700 |
| O4—N4 | 1.218 (3) | C4—H4B | 0.9700 |
| O5—N4 | 1.211 (3) | C5—C6 | 1.519 (4) |
| N1—C7 | 1.334 (3) | C5—H5A | 0.9700 |
| N1—C4 | 1.473 (3) | C5—H5B | 0.9700 |
| N1—C1 | 1.475 (3) | C6—H6A | 0.9600 |
| N2—C8 | 1.364 (3) | C6—H6B | 0.9600 |
| N2—C7 | 1.417 (3) | C6—H6C | 0.9600 |
| N2—H2 | 0.871 (10) | C8—C9 | 1.507 (3) |
| N3—C11 | 1.474 (3) | C9—C14 | 1.388 (3) |
| N4—C13 | 1.476 (3) | C9—C10 | 1.394 (3) |
| C1—C2 | 1.527 (4) | C10—C11 | 1.379 (3) |
| C1—H1A | 0.9700 | C10—H10 | 0.9300 |
| C1—H1B | 0.9700 | C11—C12 | 1.380 (3) |
| C2—C3 | 1.441 (5) | C12—C13 | 1.378 (3) |
| C2—H2A | 0.9700 | C12—H12 | 0.9300 |
| C2—H2B | 0.9700 | C13—C14 | 1.379 (3) |
| C3—H3A | 0.9600 | C14—H14 | 0.9300 |
| C7—N1—C4 | 124.44 (19) | C4—C5—C6 | 112.2 (2) |
| C7—N1—C1 | 119.7 (2) | C4—C5—H5A | 109.2 |
| C4—N1—C1 | 115.12 (19) | C6—C5—H5A | 109.2 |
| C8—N2—C7 | 125.03 (19) | C4—C5—H5B | 109.2 |
| C8—N2—H2 | 117.3 (18) | C6—C5—H5B | 109.2 |
| C7—N2—H2 | 117.5 (18) | H5A—C5—H5B | 107.9 |
| O2—N3—O3 | 123.6 (2) | C5—C6—H6A | 109.5 |
| O2—N3—C11 | 118.3 (2) | C5—C6—H6B | 109.5 |
| O3—N3—C11 | 118.1 (2) | H6A—C6—H6B | 109.5 |
| O5—N4—O4 | 124.5 (2) | C5—C6—H6C | 109.5 |
| O5—N4—C13 | 117.9 (2) | H6A—C6—H6C | 109.5 |
| O4—N4—C13 | 117.5 (2) | H6B—C6—H6C | 109.5 |
| N1—C1—C2 | 113.7 (2) | N1—C7—N2 | 114.2 (2) |
| N1—C1—H1A | 108.8 | N1—C7—S1 | 124.35 (18) |
| C2—C1—H1A | 108.8 | N2—C7—S1 | 121.38 (17) |
| N1—C1—H1B | 108.8 | O1—C8—N2 | 124.3 (2) |
| C2—C1—H1B | 108.8 | O1—C8—C9 | 119.7 (2) |
| H1A—C1—H1B | 107.7 | N2—C8—C9 | 115.93 (19) |
| C3—C2—C1 | 115.8 (3) | C14—C9—C10 | 119.9 (2) |
| C3—C2—H2A | 108.3 | C14—C9—C8 | 117.6 (2) |
| C1—C2—H2A | 108.3 | C10—C9—C8 | 122.3 (2) |
| C3—C2—H2B | 108.3 | C11—C10—C9 | 118.6 (2) |
| C1—C2—H2B | 108.3 | C11—C10—H10 | 120.7 |
| H2A—C2—H2B | 107.4 | C9—C10—H10 | 120.7 |
| C2—C3—H3A | 109.5 | C10—C11—C12 | 123.0 (2) |
| C2—C3—H3B | 109.5 | C10—C11—N3 | 118.9 (2) |
| H3A—C3—H3B | 109.5 | C12—C11—N3 | 118.1 (2) |
| C2—C3—H3C | 109.5 | C13—C12—C11 | 116.6 (2) |
| H3A—C3—H3C | 109.5 | C13—C12—H12 | 121.7 |
| H3B—C3—H3C | 109.5 | C11—C12—H12 | 121.7 |
| N1—C4—C5 | 111.5 (2) | C12—C13—C14 | 122.9 (2) |
| N1—C4—H4A | 109.3 | C12—C13—N4 | 117.9 (2) |
| C5—C4—H4A | 109.3 | C14—C13—N4 | 119.2 (2) |
| N1—C4—H4B | 109.3 | C13—C14—C9 | 119.0 (2) |
| C5—C4—H4B | 109.3 | C13—C14—H14 | 120.5 |
| H4A—C4—H4B | 108.0 | C9—C14—H14 | 120.5 |
| C7—N1—C1—C2 | −79.3 (3) | C8—C9—C10—C11 | −173.6 (2) |
| C4—N1—C1—C2 | 110.2 (3) | C9—C10—C11—C12 | 0.2 (3) |
| N1—C1—C2—C3 | −52.9 (4) | C9—C10—C11—N3 | −179.4 (2) |
| C7—N1—C4—C5 | −86.1 (3) | O2—N3—C11—C10 | −4.2 (3) |
| C1—N1—C4—C5 | 83.9 (3) | O3—N3—C11—C10 | 174.9 (2) |
| N1—C4—C5—C6 | −176.4 (2) | O2—N3—C11—C12 | 176.2 (2) |
| C4—N1—C7—N2 | −15.8 (3) | O3—N3—C11—C12 | −4.8 (4) |
| C1—N1—C7—N2 | 174.7 (2) | C10—C11—C12—C13 | −1.2 (3) |
| C4—N1—C7—S1 | 167.53 (18) | N3—C11—C12—C13 | 178.5 (2) |
| C1—N1—C7—S1 | −2.0 (3) | C11—C12—C13—C14 | 1.2 (3) |
| C8—N2—C7—N1 | 144.3 (2) | C11—C12—C13—N4 | 179.3 (2) |
| C8—N2—C7—S1 | −38.9 (3) | O5—N4—C13—C12 | 170.3 (2) |
| C7—N2—C8—O1 | −16.5 (4) | O4—N4—C13—C12 | −9.3 (3) |
| C7—N2—C8—C9 | 163.4 (2) | O5—N4—C13—C14 | −11.5 (3) |
| O1—C8—C9—C14 | −27.4 (3) | O4—N4—C13—C14 | 168.9 (2) |
| N2—C8—C9—C14 | 152.7 (2) | C12—C13—C14—C9 | −0.3 (3) |
| O1—C8—C9—C10 | 147.1 (2) | N4—C13—C14—C9 | −178.4 (2) |
| N2—C8—C9—C10 | −32.8 (3) | C10—C9—C14—C13 | −0.7 (3) |
| C14—C9—C10—C11 | 0.7 (3) | C8—C9—C14—C13 | 173.9 (2) |
| H··· | ||||
| N2—H2···O1i | 0.87 (1) | 2.53 (2) | 3.264 (3) | 142 (2) |
| N2—H2···S1i | 0.87 (1) | 2.69 (2) | 3.436 (2) | 144 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O1i | 0.87 (1) | 2.53 (2) | 3.264 (3) | 142 (2) |
| N2—H2⋯S1i | 0.87 (1) | 2.69 (2) | 3.436 (2) | 144 (2) |
Symmetry code: (i) .