| Literature DB >> 21754150 |
Nur Nadia Dzulkifli, Yang Farina, Bohari M Yamin, Ibrahim Baba, Edward R T Tiekink.
Abstract
In the title compound, C(14)H(12)ClN(3)S, the dihedral angle between the terminal benzene rings is 56.6 (2)°; the benzene rings lie to the same side of the mol-ecule. The major twist in the mol-ecule occurs around the C(ar)-N bond (ar is aromatic) [C-N-C-C = 49.9 (5)°]. The configuration about the N=C bond [1.271 (4) Å] is E. The amine H atoms lie on opposite sides of the mol-ecule with one forming an intra-molecular N-H⋯N(imine) hydrogen bond and an S(5) ring. In the crystal, centrosymmetric dimers are formed via {⋯HNC=S}(2) synthons.Entities:
Year: 2011 PMID: 21754150 PMCID: PMC3100056 DOI: 10.1107/S1600536811008920
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H12ClN3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 752 reflections |
| θ = 2.4–19.2° | |
| µ = 0.41 mm−1 | |
| β = 110.272 (8)° | Plate, light-pink |
| 0.39 × 0.21 × 0.02 mm | |
| Oxford Diffraction Xcaliber Eos Gemini diffractometer | 2905 independent reflections |
| Radiation source: fine-focus sealed tube | 1572 reflections with |
| graphite | |
| Detector resolution: 16.1952 pixels mm-1 | θmax = 26.5°, θmin = 1.6° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 8647 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2905 reflections | (Δ/σ)max < 0.001 |
| 178 parameters | Δρmax = 0.32 e Å−3 |
| 2 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.89088 (7) | 1.20521 (16) | 0.14891 (8) | 0.0759 (4) | |
| S1 | 0.43050 (7) | −0.03791 (15) | 0.10962 (7) | 0.0525 (3) | |
| N1 | 0.4748 (2) | 0.3287 (5) | 0.1918 (2) | 0.0506 (8) | |
| H1n | 0.503 (2) | 0.441 (3) | 0.192 (3) | 0.061* | |
| N2 | 0.5408 (2) | 0.2474 (4) | 0.0834 (2) | 0.0440 (8) | |
| H2n | 0.548 (2) | 0.170 (4) | 0.0405 (18) | 0.053* | |
| N3 | 0.58808 (19) | 0.4293 (4) | 0.1032 (2) | 0.0420 (7) | |
| C1 | 0.4240 (2) | 0.3118 (6) | 0.2544 (3) | 0.0466 (9) | |
| C2 | 0.4352 (3) | 0.1467 (6) | 0.3130 (3) | 0.0602 (11) | |
| H2 | 0.4743 | 0.0395 | 0.3097 | 0.072* | |
| C3 | 0.3891 (3) | 0.1397 (7) | 0.3761 (3) | 0.0720 (13) | |
| H3 | 0.3972 | 0.0284 | 0.4159 | 0.086* | |
| C4 | 0.3307 (3) | 0.2969 (8) | 0.3807 (3) | 0.0710 (13) | |
| H4 | 0.2992 | 0.2918 | 0.4235 | 0.085* | |
| C5 | 0.3189 (3) | 0.4607 (8) | 0.3223 (4) | 0.0758 (13) | |
| H5 | 0.2785 | 0.5661 | 0.3244 | 0.091* | |
| C6 | 0.3670 (3) | 0.4695 (6) | 0.2603 (3) | 0.0632 (11) | |
| H6 | 0.3607 | 0.5833 | 0.2222 | 0.076* | |
| C7 | 0.4841 (2) | 0.1899 (5) | 0.1310 (2) | 0.0409 (8) | |
| C8 | 0.6458 (2) | 0.4670 (5) | 0.0611 (3) | 0.0433 (9) | |
| H8 | 0.6524 | 0.3738 | 0.0177 | 0.052* | |
| C9 | 0.7018 (2) | 0.6534 (5) | 0.0794 (2) | 0.0396 (8) | |
| C10 | 0.6886 (2) | 0.8062 (5) | 0.1361 (2) | 0.0440 (9) | |
| H10 | 0.6402 | 0.7943 | 0.1605 | 0.053* | |
| C11 | 0.7458 (2) | 0.9755 (6) | 0.1570 (2) | 0.0497 (10) | |
| H11 | 0.7366 | 1.0773 | 0.1955 | 0.060* | |
| C12 | 0.8168 (2) | 0.9922 (5) | 0.1201 (3) | 0.0476 (9) | |
| C13 | 0.8311 (3) | 0.8459 (6) | 0.0628 (3) | 0.0549 (11) | |
| H13 | 0.8791 | 0.8599 | 0.0380 | 0.066* | |
| C14 | 0.7732 (2) | 0.6764 (6) | 0.0421 (3) | 0.0529 (10) | |
| H14 | 0.7821 | 0.5762 | 0.0027 | 0.063* |
| Cl1 | 0.0720 (7) | 0.0538 (7) | 0.0900 (9) | −0.0255 (5) | 0.0129 (6) | 0.0056 (6) |
| S1 | 0.0613 (6) | 0.0469 (6) | 0.0554 (6) | −0.0150 (5) | 0.0281 (5) | −0.0079 (5) |
| N1 | 0.056 (2) | 0.045 (2) | 0.062 (2) | −0.0107 (15) | 0.0344 (17) | −0.0113 (18) |
| N2 | 0.0534 (18) | 0.0379 (19) | 0.048 (2) | −0.0114 (14) | 0.0273 (16) | −0.0095 (14) |
| N3 | 0.0434 (16) | 0.0386 (18) | 0.0456 (18) | −0.0051 (14) | 0.0173 (15) | −0.0023 (14) |
| C1 | 0.042 (2) | 0.050 (2) | 0.050 (2) | −0.0068 (18) | 0.0194 (18) | −0.011 (2) |
| C2 | 0.068 (3) | 0.061 (3) | 0.060 (3) | 0.009 (2) | 0.032 (2) | 0.004 (2) |
| C3 | 0.095 (3) | 0.072 (3) | 0.061 (3) | 0.001 (3) | 0.043 (3) | 0.009 (2) |
| C4 | 0.073 (3) | 0.092 (4) | 0.061 (3) | −0.012 (3) | 0.040 (2) | −0.012 (3) |
| C5 | 0.077 (3) | 0.082 (4) | 0.082 (3) | 0.017 (3) | 0.045 (3) | −0.011 (3) |
| C6 | 0.073 (3) | 0.058 (3) | 0.065 (3) | 0.006 (2) | 0.032 (2) | −0.005 (2) |
| C7 | 0.040 (2) | 0.043 (2) | 0.041 (2) | 0.0024 (16) | 0.0163 (17) | 0.0000 (18) |
| C8 | 0.050 (2) | 0.040 (2) | 0.047 (2) | −0.0006 (18) | 0.0249 (18) | −0.0053 (18) |
| C9 | 0.044 (2) | 0.035 (2) | 0.041 (2) | −0.0015 (16) | 0.0162 (17) | 0.0026 (17) |
| C10 | 0.044 (2) | 0.044 (2) | 0.046 (2) | −0.0034 (17) | 0.0181 (18) | 0.0005 (19) |
| C11 | 0.058 (2) | 0.047 (2) | 0.042 (2) | 0.0007 (19) | 0.0145 (19) | −0.0001 (19) |
| C12 | 0.047 (2) | 0.037 (2) | 0.052 (2) | −0.0047 (17) | 0.0082 (19) | 0.0098 (18) |
| C13 | 0.053 (2) | 0.049 (3) | 0.073 (3) | −0.0016 (19) | 0.035 (2) | 0.014 (2) |
| C14 | 0.062 (3) | 0.041 (2) | 0.065 (3) | −0.0015 (18) | 0.034 (2) | −0.002 (2) |
| Cl1—C12 | 1.748 (4) | C4—H4 | 0.9300 |
| S1—C7 | 1.676 (4) | C5—C6 | 1.374 (5) |
| N1—C7 | 1.339 (4) | C5—H5 | 0.9300 |
| N1—C1 | 1.419 (4) | C6—H6 | 0.9300 |
| N1—H1n | 0.853 (10) | C8—C9 | 1.457 (4) |
| N2—C7 | 1.352 (4) | C8—H8 | 0.9300 |
| N2—N3 | 1.369 (4) | C9—C10 | 1.381 (4) |
| N2—H2n | 0.863 (10) | C9—C14 | 1.387 (4) |
| N3—C8 | 1.271 (4) | C10—C11 | 1.374 (4) |
| C1—C6 | 1.368 (5) | C10—H10 | 0.9300 |
| C1—C2 | 1.375 (5) | C11—C12 | 1.375 (5) |
| C2—C3 | 1.366 (5) | C11—H11 | 0.9300 |
| C2—H2 | 0.9300 | C12—C13 | 1.363 (5) |
| C3—C4 | 1.374 (6) | C13—C14 | 1.381 (5) |
| C3—H3 | 0.9300 | C13—H13 | 0.9300 |
| C4—C5 | 1.366 (6) | C14—H14 | 0.9300 |
| C7—N1—C1 | 128.3 (3) | N1—C7—N2 | 114.6 (3) |
| C7—N1—H1n | 114 (3) | N1—C7—S1 | 125.6 (3) |
| C1—N1—H1n | 117 (3) | N2—C7—S1 | 119.8 (3) |
| C7—N2—N3 | 120.2 (3) | N3—C8—C9 | 121.4 (3) |
| C7—N2—H2n | 121 (2) | N3—C8—H8 | 119.3 |
| N3—N2—H2n | 119 (2) | C9—C8—H8 | 119.3 |
| C8—N3—N2 | 117.1 (3) | C10—C9—C14 | 118.4 (3) |
| C6—C1—C2 | 119.5 (4) | C10—C9—C8 | 121.9 (3) |
| C6—C1—N1 | 118.9 (4) | C14—C9—C8 | 119.6 (3) |
| C2—C1—N1 | 121.5 (3) | C11—C10—C9 | 121.1 (3) |
| C3—C2—C1 | 120.2 (4) | C11—C10—H10 | 119.5 |
| C3—C2—H2 | 119.9 | C9—C10—H10 | 119.5 |
| C1—C2—H2 | 119.9 | C10—C11—C12 | 119.0 (4) |
| C2—C3—C4 | 120.1 (4) | C10—C11—H11 | 120.5 |
| C2—C3—H3 | 119.9 | C12—C11—H11 | 120.5 |
| C4—C3—H3 | 119.9 | C13—C12—C11 | 121.5 (3) |
| C5—C4—C3 | 119.9 (4) | C13—C12—Cl1 | 119.6 (3) |
| C5—C4—H4 | 120.0 | C11—C12—Cl1 | 118.8 (3) |
| C3—C4—H4 | 120.0 | C12—C13—C14 | 119.0 (3) |
| C4—C5—C6 | 119.9 (4) | C12—C13—H13 | 120.5 |
| C4—C5—H5 | 120.1 | C14—C13—H13 | 120.5 |
| C6—C5—H5 | 120.1 | C13—C14—C9 | 120.9 (4) |
| C1—C6—C5 | 120.4 (4) | C13—C14—H14 | 119.5 |
| C1—C6—H6 | 119.8 | C9—C14—H14 | 119.5 |
| C5—C6—H6 | 119.8 | ||
| C7—N2—N3—C8 | 174.7 (3) | N3—N2—C7—S1 | −177.2 (2) |
| C7—N1—C1—C6 | −134.1 (4) | N2—N3—C8—C9 | −178.1 (3) |
| C7—N1—C1—C2 | 49.9 (5) | N3—C8—C9—C10 | −6.3 (5) |
| C6—C1—C2—C3 | 0.5 (6) | N3—C8—C9—C14 | 171.1 (3) |
| N1—C1—C2—C3 | 176.5 (4) | C14—C9—C10—C11 | −1.3 (5) |
| C1—C2—C3—C4 | 0.5 (6) | C8—C9—C10—C11 | 176.1 (3) |
| C2—C3—C4—C5 | −0.2 (7) | C9—C10—C11—C12 | 0.4 (5) |
| C3—C4—C5—C6 | −1.2 (7) | C10—C11—C12—C13 | 0.6 (5) |
| C2—C1—C6—C5 | −2.0 (6) | C10—C11—C12—Cl1 | −178.6 (3) |
| N1—C1—C6—C5 | −178.1 (4) | C11—C12—C13—C14 | −0.5 (6) |
| C4—C5—C6—C1 | 2.3 (6) | Cl1—C12—C13—C14 | 178.7 (3) |
| C1—N1—C7—N2 | −177.2 (3) | C12—C13—C14—C9 | −0.5 (6) |
| C1—N1—C7—S1 | 4.1 (5) | C10—C9—C14—C13 | 1.3 (5) |
| N3—N2—C7—N1 | 4.1 (4) | C8—C9—C14—C13 | −176.1 (3) |
| H··· | ||||
| N1—H1n···N3 | 0.85 (2) | 2.16 (4) | 2.601 (4) | 112 (3) |
| N2—H2n···S1i | 0.86 (3) | 2.57 (3) | 3.401 (3) | 164 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.85 (2) | 2.16 (4) | 2.601 (4) | 112 (3) |
| N2—H2 | 0.86 (3) | 2.57 (3) | 3.401 (3) | 164 (2) |
Symmetry code: (i) .