Literature DB >> 21587578

1-Benzoyl-3,3-dibutyl-thio-urea.

N Gunasekaran, R Karvembu, Seik Weng Ng, Edward R T Tiekink.   

Abstract

The title mol-ecule, C(16)H(24)N(2)OS, is twisted about the central N(H)-C bond with a C-N(H)-C-N torsion angle of -62.67 (15)°. The carbonyl group is twisted out of the plane of the benzene ring, forming a C-C-C=O torsion angle of -25.06 (17)°. In the crystal, mol-ecules related by centres of symmetry are linked by pairs of inter-molecular N-H⋯S hydrogen bonds, forming eight-membered {⋯HNCS}(2) synthons. These are further connected by weak via C-H⋯O contacts, forming a two-dimensional array in the bc plane.

Entities:  

Year:  2010        PMID: 21587578      PMCID: PMC2983357          DOI: 10.1107/S1600536810037177

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For pharmaceutical applications of thio­urea derivatives, see: Binzet et al. (2009 ▶); Lipowska et al. (1996 ▶). For the coordination potential of thio­urea derivatives, see: Henderson et al. (2002 ▶); Hallale et al. (2005 ▶). For the use of ruthenium(III) complexes of thio­ureas as catalysts, see: Gunasekaran & Karvembu (2010 ▶). For related structures, see: Gunasekaran et al. (2010a ▶,b ▶).

Experimental

Crystal data

C16H24N2OS M = 292.43 Monoclinic, a = 10.3213 (7) Å b = 15.7043 (11) Å c = 10.0992 (7) Å β = 98.751 (1)° V = 1617.91 (19) Å3 Z = 4 Mo Kα radiation μ = 0.20 mm−1 T = 100 K 0.40 × 0.40 × 0.15 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.925, T max = 0.971 15120 measured reflections 3725 independent reflections 3204 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.092 S = 1.03 3725 reflections 185 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810037177/lh5132sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810037177/lh5132Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H24N2OSF(000) = 632
Mr = 292.43Dx = 1.201 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5696 reflections
a = 10.3213 (7) Åθ = 4.4–28.3°
b = 15.7043 (11) ŵ = 0.20 mm1
c = 10.0992 (7) ÅT = 100 K
β = 98.751 (1)°Block, colourless
V = 1617.91 (19) Å30.40 × 0.40 × 0.15 mm
Z = 4
Bruker SMART APEX diffractometer3725 independent reflections
Radiation source: fine-focus sealed tube3204 reflections with I > 2σ(I)
graphiteRint = 0.036
ω scansθmax = 27.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→13
Tmin = 0.925, Tmax = 0.971k = −20→20
15120 measured reflectionsl = −13→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.092H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0441P)2 + 0.602P] where P = (Fo2 + 2Fc2)/3
3725 reflections(Δ/σ)max = 0.001
185 parametersΔρmax = 0.31 e Å3
1 restraintΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.31557 (3)0.56922 (2)0.46025 (3)0.01948 (10)
O10.49254 (9)0.58166 (6)0.12400 (9)0.0197 (2)
N10.53208 (10)0.59664 (7)0.35231 (10)0.0161 (2)
H1n0.5663 (15)0.5638 (9)0.4155 (13)0.027 (4)*
N20.36726 (10)0.69784 (7)0.30300 (10)0.0178 (2)
C10.70516 (12)0.54489 (8)0.23442 (12)0.0169 (2)
C20.73420 (13)0.49345 (8)0.13018 (13)0.0214 (3)
H2A0.66670.47670.06040.026*
C30.86217 (14)0.46701 (9)0.12914 (15)0.0275 (3)
H3A0.88210.43110.05920.033*
C40.96133 (14)0.49266 (9)0.22958 (15)0.0281 (3)
H4A1.04890.47460.22780.034*
C50.93326 (13)0.54464 (9)0.33254 (14)0.0252 (3)
H5A1.00140.56240.40100.030*
C60.80499 (13)0.57064 (8)0.33523 (13)0.0205 (3)
H6A0.78530.60600.40590.025*
C70.56729 (12)0.57488 (7)0.22861 (12)0.0159 (2)
C80.40510 (12)0.62549 (8)0.36472 (12)0.0164 (2)
C90.23215 (13)0.72865 (8)0.29594 (13)0.0205 (3)
H9A0.23200.79160.29960.025*
H9B0.19440.70700.37390.025*
C100.14839 (12)0.69899 (8)0.16698 (13)0.0202 (3)
H10A0.14030.63620.16870.024*
H10B0.19260.71440.08990.024*
C110.01211 (14)0.73842 (9)0.14782 (14)0.0274 (3)
H11A−0.02980.72610.22760.033*
H11B0.02020.80100.14070.033*
C12−0.07515 (14)0.70524 (10)0.02386 (14)0.0282 (3)
H12A−0.16170.73210.01660.042*
H12B−0.08450.64340.03080.042*
H12C−0.03560.7189−0.05580.042*
C130.45409 (13)0.75523 (8)0.24042 (12)0.0194 (3)
H13A0.40050.79030.17110.023*
H13B0.51530.72080.19590.023*
C140.53205 (13)0.81332 (8)0.34351 (13)0.0218 (3)
H14A0.59340.77860.40650.026*
H14B0.47130.84250.39560.026*
C150.60954 (14)0.87993 (8)0.27769 (14)0.0247 (3)
H15A0.54730.91630.21840.030*
H15B0.65740.91680.34830.030*
C160.70717 (14)0.84140 (9)0.19606 (14)0.0265 (3)
H16A0.75380.88710.15700.040*
H16B0.66030.80610.12420.040*
H16C0.77030.80620.25440.040*
U11U22U33U12U13U23
S10.01575 (16)0.02258 (17)0.02072 (17)0.00138 (11)0.00475 (12)0.00432 (12)
O10.0204 (5)0.0224 (4)0.0150 (4)−0.0002 (3)−0.0014 (4)−0.0001 (3)
N10.0144 (5)0.0204 (5)0.0133 (5)0.0021 (4)0.0010 (4)0.0027 (4)
N20.0170 (5)0.0197 (5)0.0162 (5)0.0014 (4)0.0007 (4)0.0015 (4)
C10.0165 (6)0.0178 (6)0.0169 (6)−0.0016 (4)0.0042 (5)0.0036 (4)
C20.0238 (7)0.0202 (6)0.0207 (6)−0.0016 (5)0.0048 (5)0.0000 (5)
C30.0292 (8)0.0245 (7)0.0310 (8)0.0039 (6)0.0121 (6)−0.0009 (6)
C40.0199 (7)0.0292 (7)0.0372 (8)0.0061 (5)0.0102 (6)0.0093 (6)
C50.0179 (7)0.0312 (7)0.0258 (7)−0.0025 (5)0.0010 (5)0.0064 (6)
C60.0191 (6)0.0247 (6)0.0178 (6)−0.0020 (5)0.0038 (5)0.0020 (5)
C70.0174 (6)0.0143 (5)0.0160 (6)−0.0028 (4)0.0026 (5)0.0009 (4)
C80.0146 (6)0.0199 (6)0.0140 (6)0.0005 (4)−0.0001 (4)−0.0013 (4)
C90.0199 (6)0.0220 (6)0.0191 (6)0.0066 (5)0.0015 (5)0.0000 (5)
C100.0190 (6)0.0241 (6)0.0171 (6)0.0036 (5)0.0016 (5)0.0003 (5)
C110.0239 (7)0.0314 (7)0.0248 (7)0.0096 (6)−0.0025 (5)−0.0028 (6)
C120.0210 (7)0.0386 (8)0.0238 (7)0.0056 (6)−0.0008 (5)0.0007 (6)
C130.0229 (6)0.0174 (6)0.0176 (6)−0.0008 (5)0.0019 (5)0.0023 (5)
C140.0217 (7)0.0247 (6)0.0190 (6)0.0007 (5)0.0028 (5)−0.0045 (5)
C150.0270 (7)0.0216 (6)0.0247 (7)−0.0026 (5)0.0013 (5)−0.0051 (5)
C160.0227 (7)0.0313 (7)0.0253 (7)−0.0010 (6)0.0029 (6)0.0025 (6)
S1—C81.6843 (13)C9—H9B0.9900
O1—C71.2144 (15)C10—C111.5221 (18)
N1—C71.3955 (16)C10—H10A0.9900
N1—C81.4102 (16)C10—H10B0.9900
N1—H1n0.854 (9)C11—C121.5188 (19)
N2—C81.3259 (16)C11—H11A0.9900
N2—C91.4675 (16)C11—H11B0.9900
N2—C131.4790 (16)C12—H12A0.9800
C1—C61.3938 (18)C12—H12B0.9800
C1—C21.3953 (18)C12—H12C0.9800
C1—C71.4915 (17)C13—C141.5194 (17)
C2—C31.3861 (19)C13—H13A0.9900
C2—H2A0.9500C13—H13B0.9900
C3—C41.387 (2)C14—C151.5289 (19)
C3—H3A0.9500C14—H14A0.9900
C4—C51.387 (2)C14—H14B0.9900
C4—H4A0.9500C15—C161.5212 (19)
C5—C61.3896 (19)C15—H15A0.9900
C5—H5A0.9500C15—H15B0.9900
C6—H6A0.9500C16—H16A0.9800
C9—C101.5225 (18)C16—H16B0.9800
C9—H9A0.9900C16—H16C0.9800
C7—N1—C8122.03 (10)C9—C10—H10B109.2
C7—N1—H1n112.7 (11)C11—C10—H10B109.2
C8—N1—H1n114.3 (11)H10A—C10—H10B107.9
C8—N2—C9121.01 (11)C12—C11—C10112.69 (12)
C8—N2—C13124.66 (11)C12—C11—H11A109.1
C9—N2—C13114.30 (10)C10—C11—H11A109.1
C6—C1—C2119.95 (12)C12—C11—H11B109.1
C6—C1—C7122.14 (11)C10—C11—H11B109.1
C2—C1—C7117.80 (11)H11A—C11—H11B107.8
C3—C2—C1119.57 (13)C11—C12—H12A109.5
C3—C2—H2A120.2C11—C12—H12B109.5
C1—C2—H2A120.2H12A—C12—H12B109.5
C4—C3—C2120.37 (13)C11—C12—H12C109.5
C4—C3—H3A119.8H12A—C12—H12C109.5
C2—C3—H3A119.8H12B—C12—H12C109.5
C3—C4—C5120.29 (13)N2—C13—C14111.42 (10)
C3—C4—H4A119.9N2—C13—H13A109.3
C5—C4—H4A119.9C14—C13—H13A109.3
C4—C5—C6119.73 (13)N2—C13—H13B109.3
C4—C5—H5A120.1C14—C13—H13B109.3
C6—C5—H5A120.1H13A—C13—H13B108.0
C5—C6—C1120.08 (13)C13—C14—C15111.74 (11)
C5—C6—H6A120.0C13—C14—H14A109.3
C1—C6—H6A120.0C15—C14—H14A109.3
O1—C7—N1122.67 (11)C13—C14—H14B109.3
O1—C7—C1122.54 (11)C15—C14—H14B109.3
N1—C7—C1114.77 (10)H14A—C14—H14B107.9
N2—C8—N1116.41 (11)C16—C15—C14113.39 (11)
N2—C8—S1124.81 (10)C16—C15—H15A108.9
N1—C8—S1118.73 (9)C14—C15—H15A108.9
N2—C9—C10110.64 (10)C16—C15—H15B108.9
N2—C9—H9A109.5C14—C15—H15B108.9
C10—C9—H9A109.5H15A—C15—H15B107.7
N2—C9—H9B109.5C15—C16—H16A109.5
C10—C9—H9B109.5C15—C16—H16B109.5
H9A—C9—H9B108.1H16A—C16—H16B109.5
C9—C10—C11112.19 (11)C15—C16—H16C109.5
C9—C10—H10A109.2H16A—C16—H16C109.5
C11—C10—H10A109.2H16B—C16—H16C109.5
C6—C1—C2—C31.20 (19)C9—N2—C8—N1172.80 (10)
C7—C1—C2—C3177.48 (11)C13—N2—C8—N1−9.26 (17)
C1—C2—C3—C4−1.2 (2)C9—N2—C8—S1−9.85 (17)
C2—C3—C4—C50.4 (2)C13—N2—C8—S1168.09 (9)
C3—C4—C5—C60.4 (2)C7—N1—C8—N2−62.67 (15)
C4—C5—C6—C1−0.3 (2)C7—N1—C8—S1119.81 (11)
C2—C1—C6—C5−0.46 (19)C8—N2—C9—C10−93.34 (14)
C7—C1—C6—C5−176.57 (12)C13—N2—C9—C1088.52 (13)
C8—N1—C7—O12.17 (18)N2—C9—C10—C11−173.07 (11)
C8—N1—C7—C1−179.45 (11)C9—C10—C11—C12−176.53 (12)
C6—C1—C7—O1151.14 (12)C8—N2—C13—C14−82.29 (15)
C2—C1—C7—O1−25.06 (17)C9—N2—C13—C1495.77 (12)
C6—C1—C7—N1−27.25 (16)N2—C13—C14—C15−173.16 (10)
C2—C1—C7—N1156.56 (11)C13—C14—C15—C16−59.57 (15)
D—H···AD—HH···AD···AD—H···A
N1—H1n···S1i0.85 (1)2.64 (1)3.4547 (11)160 (1)
C2—H2a···O1ii0.952.473.4102 (16)173
C14—H14b···O1iii0.992.583.3559 (16)136
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1n⋯S1i0.85 (1)2.64 (1)3.4547 (11)160 (1)
C2—H2a⋯O1ii0.952.473.4102 (16)173
C14—H14b⋯O1iii0.992.583.3559 (16)136

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

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2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  3-Benzoyl-1,1-dibenzyl-thio-urea.

Authors:  N Gunasekaran; R Karvembu; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-18

4.  1-Benzoyl-3,3-bis-(propan-2-yl)thio-urea.

Authors:  N Gunasekaran; R Karvembu; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-24
  4 in total
  4 in total

1.  1-(3,5-Dinitro-benzo-yl)-3,3-dipropyl-thio-urea.

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2.  3-Cyclo-hexyl-1-(3,5-dinitro-benzo-yl)thio-urea.

Authors:  Sohail Saeed; Naghmana Rashid; Muhammad Sher; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-16

3.  1-Benzoyl-3-methyl-3-pentyl-thio-urea.

Authors:  N Gunasekaran; P Jerome; R Karvembu; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-16

4.  1-Benzoyl-3,3-bis-(2-methyl-prop-yl)thio-urea.

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