| Literature DB >> 21753953 |
Wojciech Starosta1, Janusz Leciejewicz.
Abstract
The structure of the title compound, [Li(C(5)H(3)N(2)O(2))(H(2)O)](n), is composed of centrosymmetric dimers in which two Li(I) ions are bridged by a carboxyl-ate O atom, each donated by a ligand, acting in a bidentate mode. The second carboxyl-ato O atoms bridge the dimers to Li(I) ions in adjacent dimers, forming mol-ecular layers parallel to (001). Each Li(I) ion is coordinated by two bridging carboxyl-ate O atoms, a bridging carboxyl-ate O atom donated by the adjacent dimer and an aqua O atom, resulting in a distorted tetra-hedral coordination geometry. The layers are held together by O-H⋯N hydrogen bonds in which coordinated water O atoms act as donors and ligand hetero-ring N atoms as acceptors.Entities:
Year: 2011 PMID: 21753953 PMCID: PMC3099971 DOI: 10.1107/S1600536811008634
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Li(C5H3N2O2)(H2O)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 6–15° | |
| µ = 0.13 mm−1 | |
| β = 97.08 (3)° | Plates, colourless |
| 0.30 × 0.28 × 0.12 mm | |
| Kuma KM-4 four-circle diffractometer | 1208 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 30.1°, θmin = 2.5° |
| profile data from ω/2θ scans | |
| Absorption correction: analytical ( | |
| 1958 measured reflections | 3 standard reflections every 200 reflections |
| 1843 independent reflections | intensity decay: 2.1% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1843 reflections | (Δ/σ)max < 0.001 |
| 108 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.03194 (12) | 0.42855 (10) | 0.15091 (11) | 0.0264 (2) | |
| C4 | 0.18403 (15) | 0.37648 (13) | 0.41306 (14) | 0.0210 (2) | |
| O2 | −0.03510 (14) | 0.24156 (11) | 0.28565 (13) | 0.0369 (3) | |
| N2 | 0.40511 (15) | 0.28845 (14) | 0.60951 (16) | 0.0334 (3) | |
| C7 | 0.04912 (15) | 0.34645 (12) | 0.27196 (15) | 0.0210 (3) | |
| C6 | 0.33735 (19) | 0.51936 (16) | 0.61350 (17) | 0.0316 (3) | |
| H6 | 0.3551 | 0.6058 | 0.6629 | 0.038* | |
| N1 | 0.42945 (15) | 0.41548 (14) | 0.67579 (15) | 0.0334 (3) | |
| C3 | 0.28349 (16) | 0.26953 (14) | 0.48590 (16) | 0.0263 (3) | |
| H3 | 0.2633 | 0.1804 | 0.4455 | 0.032* | |
| C5 | 0.21451 (17) | 0.50626 (14) | 0.47709 (16) | 0.0262 (3) | |
| H5 | 0.1559 | 0.5825 | 0.4316 | 0.031* | |
| Li1 | −0.1023 (3) | 0.3958 (2) | −0.0663 (3) | 0.0264 (5) | |
| O3 | −0.33301 (14) | 0.39117 (15) | −0.04432 (15) | 0.0415 (3) | |
| H31 | −0.389 (4) | 0.354 (3) | 0.027 (3) | 0.075 (8)* | |
| H32 | −0.403 (4) | 0.403 (3) | −0.133 (4) | 0.075 (8)* |
| O1 | 0.0337 (5) | 0.0224 (5) | 0.0208 (4) | −0.0029 (3) | −0.0062 (3) | 0.0050 (3) |
| C4 | 0.0245 (5) | 0.0214 (5) | 0.0163 (5) | −0.0005 (4) | −0.0008 (4) | 0.0011 (4) |
| O2 | 0.0491 (6) | 0.0269 (5) | 0.0311 (5) | −0.0160 (4) | −0.0099 (4) | 0.0068 (4) |
| N2 | 0.0301 (6) | 0.0370 (7) | 0.0308 (6) | 0.0046 (5) | −0.0057 (4) | 0.0065 (5) |
| C7 | 0.0259 (6) | 0.0182 (6) | 0.0178 (5) | 0.0004 (4) | −0.0019 (4) | 0.0000 (4) |
| C6 | 0.0357 (7) | 0.0332 (7) | 0.0241 (6) | −0.0053 (6) | −0.0035 (5) | −0.0046 (5) |
| N1 | 0.0302 (6) | 0.0422 (7) | 0.0255 (6) | −0.0032 (5) | −0.0057 (4) | 0.0016 (5) |
| C3 | 0.0289 (6) | 0.0249 (6) | 0.0240 (6) | 0.0022 (5) | −0.0009 (5) | 0.0023 (5) |
| C5 | 0.0308 (6) | 0.0231 (6) | 0.0230 (6) | 0.0007 (5) | −0.0036 (4) | −0.0006 (5) |
| Li1 | 0.0312 (11) | 0.0179 (10) | 0.0278 (11) | −0.0006 (8) | −0.0057 (8) | −0.0018 (8) |
| O3 | 0.0282 (5) | 0.0601 (8) | 0.0336 (6) | −0.0048 (5) | −0.0066 (4) | 0.0073 (5) |
| O1—C7 | 1.2501 (15) | C6—C5 | 1.3965 (18) |
| O1—Li1i | 1.946 (2) | C6—H6 | 0.9300 |
| O1—Li1 | 1.967 (2) | C3—H3 | 0.9300 |
| C4—C5 | 1.3697 (18) | C5—H5 | 0.9300 |
| C4—C3 | 1.3995 (17) | Li1—O2iii | 1.909 (3) |
| C4—C7 | 1.5078 (17) | Li1—O3 | 1.915 (3) |
| O2—C7 | 1.2398 (16) | Li1—O1i | 1.946 (2) |
| O2—Li1ii | 1.909 (3) | Li1—Li1i | 2.751 (4) |
| N2—C3 | 1.3272 (18) | O3—H31 | 0.85 (3) |
| N2—N1 | 1.3460 (19) | O3—H32 | 0.86 (3) |
| C6—N1 | 1.318 (2) | ||
| C7—O1—Li1i | 144.92 (11) | C4—C3—H3 | 118.2 |
| C7—O1—Li1 | 125.64 (11) | C4—C5—C6 | 117.21 (12) |
| Li1i—O1—Li1 | 89.33 (10) | C4—C5—H5 | 121.4 |
| C5—C4—C3 | 117.00 (11) | C6—C5—H5 | 121.4 |
| C5—C4—C7 | 122.76 (11) | O2iii—Li1—O3 | 113.75 (12) |
| C3—C4—C7 | 120.23 (11) | O2iii—Li1—O1i | 105.83 (12) |
| C7—O2—Li1ii | 146.29 (11) | O3—Li1—O1i | 112.89 (12) |
| C3—N2—N1 | 118.83 (12) | O2iii—Li1—O1 | 119.50 (12) |
| O2—C7—O1 | 125.47 (12) | O3—Li1—O1 | 111.69 (13) |
| O2—C7—C4 | 116.99 (11) | O1i—Li1—O1 | 90.67 (10) |
| O1—C7—C4 | 117.54 (11) | O2iii—Li1—Li1i | 123.03 (16) |
| N1—C6—C5 | 123.32 (13) | O3—Li1—Li1i | 122.65 (15) |
| N1—C6—H6 | 118.3 | O1i—Li1—Li1i | 45.65 (7) |
| C5—C6—H6 | 118.3 | O1—Li1—Li1i | 45.02 (7) |
| C6—N1—N2 | 119.95 (12) | Li1—O3—H31 | 133.5 (19) |
| N2—C3—C4 | 123.52 (13) | Li1—O3—H32 | 118.7 (18) |
| N2—C3—H3 | 118.2 | H31—O3—H32 | 104 (3) |
| H··· | ||||
| O3—H32···N1iv | 0.86 (3) | 1.93 (3) | 2.7910 (18) | 175 (3) |
| O3—H31···N2v | 0.85 (3) | 2.33 (3) | 3.1272 (19) | 155 (2) |
Selected bond lengths (Å)
| O1—Li1 | 1.967 (2) |
| Li1—O2i | 1.909 (3) |
| Li1—O3 | 1.915 (3) |
| Li1—O1ii | 1.946 (2) |
Symmetry codes: (i) ; (ii) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H32⋯N1iii | 0.86 (3) | 1.93 (3) | 2.7910 (18) | 175 (3) |
| O3—H31⋯N2iv | 0.85 (3) | 2.33 (3) | 3.1272 (19) | 155 (2) |
Symmetry codes: (iii) ; (iv) .