Literature DB >> 21749486

Deletion of alternative pathways for reductant recycling in Thermococcus kodakarensis increases hydrogen production.

Thomas J Santangelo1, L'ubomíra Cuboňová, John N Reeve.   

Abstract

Hydrogen (H₂) production by Thermococcus kodakarensis compares very favourably with the levels reported for the most productive algal, fungal and bacterial systems. T. kodakarensis can also consume H₂ and is predicted to use several alternative pathways to recycle reduced cofactors, some of which may compete with H₂ production for reductant disposal. To explore the reductant flux and possible competition for H₂ production in vivo, T. kodakarensis TS517 was mutated to precisely delete each of the alternative pathways of reductant disposal, H₂ production and consumption. The results obtained establish that H₂ is generated predominantly by the membrane-bound hydrogenase complex (Mbh), confirm the essential role of the SurR (TK1086p) regulator in vivo, delineate the roles of sulfur (S°) regulon proteins and demonstrate that preventing H₂ consumption results in a substantial net increase in H₂ production. Constitutive expression of TK1086 (surR) from a replicative plasmid restored the ability of T. kodakarensis TS1101 (ΔTK1086) to grow in the absence of S° and stimulated H₂ production, revealing a second mechanism to increase H₂ production. Transformation of T. kodakarensis TS1101 with plasmids that express SurR variants constructed to direct the constitutive synthesis of the Mbh complex and prevent expression of the S° regulon was only possible in the absence of S° and, under these conditions, the transformants exhibited wild-type growth and H₂ production. With S° present, they grew slower but synthesized more H₂ per unit biomass than T. kodakarensis TS517.
© 2011 Blackwell Publishing Ltd.

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Year:  2011        PMID: 21749486      PMCID: PMC3179246          DOI: 10.1111/j.1365-2958.2011.07734.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  27 in total

1.  Different cleavage specificities of the dual catalytic domains in chitinase from the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.

Authors:  T Tanaka; T Fukui; T Imanaka
Journal:  J Biol Chem       Date:  2001-07-23       Impact factor: 5.157

2.  TFB1 or TFB2 is sufficient for Thermococcus kodakaraensis viability and for basal transcription in vitro.

Authors:  Thomas J Santangelo; L'ubomíra Cubonová; Cindy L James; John N Reeve
Journal:  J Mol Biol       Date:  2006-12-30       Impact factor: 5.469

3.  Description of Thermococcus kodakaraensis sp. nov., a well studied hyperthermophilic archaeon previously reported as Pyrococcus sp. KOD1.

Authors:  Haruyuki Atomi; Toshiaki Fukui; Tamotsu Kanai; Masaaki Morikawa; Tadayuki Imanaka
Journal:  Archaea       Date:  2004-10       Impact factor: 3.273

4.  Characterization of NADH oxidase/NADPH polysulfide oxidoreductase and its unexpected participation in oxygen sensitivity in an anaerobic hyperthermophilic archaeon.

Authors:  Hiroki Kobori; Masayuki Ogino; Izumi Orita; Satoshi Nakamura; Tadayuki Imanaka; Toshiaki Fukui
Journal:  J Bacteriol       Date:  2010-07-30       Impact factor: 3.490

5.  Thermococcus kodakarensis genetics: TK1827-encoded beta-glycosidase, new positive-selection protocol, and targeted and repetitive deletion technology.

Authors:  Thomas J Santangelo; L'ubomíra Cubonová; John N Reeve
Journal:  Appl Environ Microbiol       Date:  2009-12-18       Impact factor: 4.792

6.  Characterization of hydrogenase II from the hyperthermophilic archaeon Pyrococcus furiosus and assessment of its role in sulfur reduction.

Authors:  K Ma; R Weiss; M W Adams
Journal:  J Bacteriol       Date:  2000-04       Impact factor: 3.490

7.  Continuous hydrogen production by the hyperthermophilic archaeon, Thermococcus kodakaraensis KOD1.

Authors:  Tamotsu Kanai; Hiroyuki Imanaka; Akihito Nakajima; Kenetsu Uwamori; Yoshiyuki Omori; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Biotechnol       Date:  2005-01-20       Impact factor: 3.307

8.  The elemental sulfur-responsive protein (SipA) from the hyperthermophilic archaeon Pyrococcus furiosus is regulated by sulfide in an iron-dependent manner.

Authors:  Sonya M Clarkson; Elizabeth C Newcomer; Everett G Young; Michael W W Adams
Journal:  J Bacteriol       Date:  2010-08-27       Impact factor: 3.490

9.  Concerted action of diacetylchitobiose deacetylase and exo-beta-D-glucosaminidase in a novel chitinolytic pathway in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.

Authors:  Takeshi Tanaka; Toshiaki Fukui; Shinsuke Fujiwara; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Biol Chem       Date:  2004-05-10       Impact factor: 5.157

10.  Insights into the metabolism of elemental sulfur by the hyperthermophilic archaeon Pyrococcus furiosus: characterization of a coenzyme A- dependent NAD(P)H sulfur oxidoreductase.

Authors:  Gerrit J Schut; Stephanie L Bridger; Michael W W Adams
Journal:  J Bacteriol       Date:  2007-04-20       Impact factor: 3.490

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  29 in total

1.  Genetic examination and mass balance analysis of pyruvate/amino acid oxidation pathways in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Kenta Nohara; Izumi Orita; Satoshi Nakamura; Tadayuki Imanaka; Toshiaki Fukui
Journal:  J Bacteriol       Date:  2014-08-25       Impact factor: 3.490

Review 2.  Cellulolytic thermophilic microorganisms in white biotechnology: a review.

Authors:  Kalpana Sahoo; Rajesh Kumar Sahoo; Mahendra Gaur; Enketeswara Subudhi
Journal:  Folia Microbiol (Praha)       Date:  2019-05-17       Impact factor: 2.099

3.  Genetic analyses of the functions of [NiFe]-hydrogenase maturation endopeptidases in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Tamotsu Kanai; Ayako Yasukochi; Jan-Robert Simons; Joseph Walker Scott; Wakao Fukuda; Tadayuki Imanaka; Haruyuki Atomi
Journal:  Extremophiles       Date:  2016-10-13       Impact factor: 2.395

Review 4.  An overview of 25 years of research on Thermococcus kodakarensis, a genetically versatile model organism for archaeal research.

Authors:  Naeem Rashid; Mehwish Aslam
Journal:  Folia Microbiol (Praha)       Date:  2019-07-08       Impact factor: 2.099

5.  Analysis of the complete genome sequence of the archaeon Pyrococcus chitonophagus DSM 10152 (formerly Thermococcus chitonophagus).

Authors:  Konstantinos Papadimitriou; Panagiotis K Baharidis; Anastasios Georgoulis; Marion Engel; Maria Louka; Georgia Karamolegkou; Aggeliki Tsoka; Jochen Blom; Bruno Pot; Piotr Malecki; Wojciech Rypniewski; Harald Huber; Michael Schloter; Constantinos Vorgias
Journal:  Extremophiles       Date:  2016-03-25       Impact factor: 2.395

6.  Extreme Thermophiles: Moving beyond single-enzyme biocatalysis.

Authors:  Andrew D Frock; Robert M Kelly
Journal:  Curr Opin Chem Eng       Date:  2012-11-12       Impact factor: 5.163

7.  Deletion strains reveal metabolic roles for key elemental sulfur-responsive proteins in Pyrococcus furiosus.

Authors:  Stephanie L Bridger; Sonya M Clarkson; Karen Stirrett; Megan B DeBarry; Gina L Lipscomb; Gerrit J Schut; Janet Westpheling; Robert A Scott; Michael W W Adams
Journal:  J Bacteriol       Date:  2011-09-30       Impact factor: 3.490

8.  Analyses of in vivo interactions between transcription factors and the archaeal RNA polymerase.

Authors:  Julie E Walker; Thomas J Santangelo
Journal:  Methods       Date:  2015-05-29       Impact factor: 3.608

9.  Mechanism of oxygen detoxification by the surprisingly oxygen-tolerant hyperthermophilic archaeon, Pyrococcus furiosus.

Authors:  Michael P Thorgersen; Karen Stirrett; Robert A Scott; Michael W W Adams
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-23       Impact factor: 11.205

10.  An archaeal histone is required for transformation of Thermococcus kodakarensis.

Authors:  Lubomira Čuboňováa; Masahiro Katano; Tamotsu Kanai; Haruyuki Atomi; John N Reeve; Thomas J Santangelo
Journal:  J Bacteriol       Date:  2012-10-12       Impact factor: 3.490

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