Literature DB >> 17449625

Insights into the metabolism of elemental sulfur by the hyperthermophilic archaeon Pyrococcus furiosus: characterization of a coenzyme A- dependent NAD(P)H sulfur oxidoreductase.

Gerrit J Schut1, Stephanie L Bridger, Michael W W Adams.   

Abstract

The hyperthermophilic archaeon Pyrococcus furiosus uses carbohydrates as a carbon source and produces acetate, CO2, and H2 as end products. When S(0) is added to a growing culture, within 10 min the rate of H2 production rapidly decreases and H(2)S is detected. After 1 hour cells contain high NADPH- and coenzyme A-dependent S(0) reduction activity (0.7 units/mg, 85 degrees C) located in the cytoplasm. The enzyme responsible for this activity was purified to electrophoretic homogeneity (specific activity, 100 units/mg) and is termed NAD(P)H elemental sulfur oxidoreductase (NSR). NSR is a homodimeric flavoprotein (M(r), 100,000) and is encoded by PF1186. This designation was previously assigned to the gene encoding an enzyme that reduces coenzyme A disulfide, which is a side reaction of NSR. Whole-genome DNA microarray and quantitative PCR analyses showed that the expression of NSR is up-regulated up to sevenfold within 10 min of S(0) addition. This primary response to S(0) also involves the up-regulation (>16-fold) of a 13-gene cluster encoding a membrane-bound oxidoreductase (MBX). The cluster encoding MBX is proposed to replace the homologous 14-gene cluster that encodes the ferredoxin-oxidizing, H2-evolving membrane-bound hydrogenase (MBH), which is down-regulated >12-fold within 10 min of S(0) addition. Although an activity for MBX could not be demonstrated, it is proposed to conserve energy by oxidizing ferredoxin and reducing NADP, which is used by NSR to reduce S(0). A secondary response to S(0) is observed 30 min after S(0) addition and includes the up-regulation of genes encoding proteins involved in amino acid biosynthesis and iron metabolism, as well as two so-called sulfur-induced proteins termed SipA and SipB. This novel S(0)-reducing system involving NSR and MBX has been found so far only in the heterotrophic Thermococcales and is in contrast to the cytochrome- and quinone-based S(0)-reducing system in autotrophic archaea and bacteria.

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Year:  2007        PMID: 17449625      PMCID: PMC1913366          DOI: 10.1128/JB.00031-07

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  49 in total

1.  2-keto acid oxidoreductases from Pyrococcus furiosus and Thermococcus litoralis.

Authors:  G J Schut; A L Menon; M W Adams
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

Review 2.  The Mrp system: a giant among monovalent cation/proton antiporters?

Authors:  Talia H Swartz; Sayuri Ikewada; Osamu Ishikawa; Masahiro Ito; Terry Ann Krulwich
Journal:  Extremophiles       Date:  2005-06-25       Impact factor: 2.395

3.  DNA microarray analysis of the hyperthermophilic archaeon Pyrococcus furiosus: evidence for anNew type of sulfur-reducing enzyme complex.

Authors:  G J Schut; J Zhou; M W Adams
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

4.  Discovery and characterization of a Coenzyme A disulfide reductase from Pyrococcus horikoshii. Implications for this disulfide metabolism of anaerobic hyperthermophiles.

Authors:  Dennis R Harris; Donald E Ward; Jeremy M Feasel; Kyle M Lancaster; Ryan D Murphy; T Conn Mallet; Edward J Crane
Journal:  FEBS J       Date:  2005-03       Impact factor: 5.542

Review 5.  Protein disulfides and protein disulfide oxidoreductases in hyperthermophiles.

Authors:  Rudolf Ladenstein; Bin Ren
Journal:  FEBS J       Date:  2006-08-23       Impact factor: 5.542

6.  Enzymes of hydrogen metabolism in Pyrococcus furiosus.

Authors:  P J Silva; E C van den Ban; H Wassink; H Haaker; B de Castro; F T Robb; W R Hagen
Journal:  Eur J Biochem       Date:  2000-11

Review 7.  Distribution and phylogenies of enzymes of the Embden-Meyerhof-Parnas pathway from archaea and hyperthermophilic bacteria support a gluconeogenic origin of metabolism.

Authors:  Ron S Ronimus; Hugh W Morgan
Journal:  Archaea       Date:  2003-10       Impact factor: 3.273

8.  Characterization of hydrogenase II from the hyperthermophilic archaeon Pyrococcus furiosus and assessment of its role in sulfur reduction.

Authors:  K Ma; R Weiss; M W Adams
Journal:  J Bacteriol       Date:  2000-04       Impact factor: 3.490

9.  Determination of coenzyme A levels in Pyrococcus furiosus and other Archaea: implications for a general role for coenzyme A in thermophiles.

Authors:  Charles S Hummel; Kyle M Lancaster; Edward J Crane
Journal:  FEMS Microbiol Lett       Date:  2005-09-19       Impact factor: 2.742

10.  Whole-genome DNA microarray analysis of a hyperthermophile and an archaeon: Pyrococcus furiosus grown on carbohydrates or peptides.

Authors:  Gerrit J Schut; Scott D Brehm; Susmita Datta; Michael W W Adams
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

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  73 in total

1.  Distinct physiological roles of the three [NiFe]-hydrogenase orthologs in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Tamotsu Kanai; Ryoji Matsuoka; Haruki Beppu; Akihito Nakajima; Yoshihiro Okada; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2011-04-22       Impact factor: 3.490

2.  Engineering hyperthermophilic archaeon Pyrococcus furiosus to overproduce its cytoplasmic [NiFe]-hydrogenase.

Authors:  Sanjeev K Chandrayan; Patrick M McTernan; R Christopher Hopkins; Junsong Sun; Francis E Jenney; Michael W W Adams
Journal:  J Biol Chem       Date:  2011-12-07       Impact factor: 5.157

3.  Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis.

Authors:  Nikolai V Ravin; Andrey V Mardanov; Alexey V Beletsky; Ilya V Kublanov; Tatiana V Kolganova; Alexander V Lebedinsky; Nikolai A Chernyh; Elizaveta A Bonch-Osmolovskaya; Konstantin G Skryabin
Journal:  J Bacteriol       Date:  2008-12-29       Impact factor: 3.490

4.  Natural competence in the hyperthermophilic archaeon Pyrococcus furiosus facilitates genetic manipulation: construction of markerless deletions of genes encoding the two cytoplasmic hydrogenases.

Authors:  Gina L Lipscomb; Karen Stirrett; Gerrit J Schut; Fei Yang; Francis E Jenney; Robert A Scott; Michael W W Adams; Janet Westpheling
Journal:  Appl Environ Microbiol       Date:  2011-02-11       Impact factor: 4.792

5.  Parallel evolution of transcriptome architecture during genome reorganization.

Authors:  Sung Ho Yoon; David J Reiss; J Christopher Bare; Dan Tenenbaum; Min Pan; Joseph Slagel; Robert L Moritz; Sujung Lim; Murray Hackett; Angeli Lal Menon; Michael W W Adams; Adam Barnebey; Steven M Yannone; John A Leigh; Nitin S Baliga
Journal:  Genome Res       Date:  2011-07-12       Impact factor: 9.043

6.  Two functionally distinct NADP+-dependent ferredoxin oxidoreductases maintain the primary redox balance of Pyrococcus furiosus.

Authors:  Diep M N Nguyen; Gerrit J Schut; Oleg A Zadvornyy; Monika Tokmina-Lukaszewska; Saroj Poudel; Gina L Lipscomb; Leslie A Adams; Jessica T Dinsmore; William J Nixon; Eric S Boyd; Brian Bothner; John W Peters; Michael W W Adams
Journal:  J Biol Chem       Date:  2017-07-13       Impact factor: 5.157

7.  Mechanism of oxygen detoxification by the surprisingly oxygen-tolerant hyperthermophilic archaeon, Pyrococcus furiosus.

Authors:  Michael P Thorgersen; Karen Stirrett; Robert A Scott; Michael W W Adams
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-23       Impact factor: 11.205

8.  Insight into the evolution of microbial metabolism from the deep-branching bacterium, Thermovibrio ammonificans.

Authors:  Donato Giovannelli; Stefan M Sievert; Michael Hügler; Stephanie Markert; Dörte Becher; Thomas Schweder; Costantino Vetriani
Journal:  Elife       Date:  2017-04-24       Impact factor: 8.140

9.  Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea.

Authors:  Brett J Baker; Jimmy H Saw; Anders E Lind; Cassandre Sara Lazar; Kai-Uwe Hinrichs; Andreas P Teske; Thijs J G Ettema
Journal:  Nat Microbiol       Date:  2016-02-15       Impact factor: 17.745

10.  Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis.

Authors:  Andrey V Mardanov; Nikolai V Ravin; Vitali A Svetlitchnyi; Alexey V Beletsky; Margarita L Miroshnichenko; Elizaveta A Bonch-Osmolovskaya; Konstantin G Skryabin
Journal:  Appl Environ Microbiol       Date:  2009-05-15       Impact factor: 4.792

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