Literature DB >> 23413412

Extreme Thermophiles: Moving beyond single-enzyme biocatalysis.

Andrew D Frock1, Robert M Kelly.   

Abstract

Extremely thermophilic microorganisms have been sources of thermostable and thermoactive enzymes for over 30 years. However, information and insights gained from genome sequences, in conjunction with new tools for molecular genetics, have opened up exciting new possibilities for biotechnological opportunities based on extreme thermophiles that go beyond single-step biotransformations. Although the pace for discovering novel microorganisms has slowed over the past two decades, genome sequence data have provided clues to novel biomolecules and metabolic pathways, which can be mined for a range of new applications. Furthermore, recent advances in molecular genetics for extreme thermophiles have made metabolic engineering for high temperature applications a reality.

Entities:  

Year:  2012        PMID: 23413412      PMCID: PMC3568776          DOI: 10.1016/j.coche.2012.07.003

Source DB:  PubMed          Journal:  Curr Opin Chem Eng        ISSN: 2211-3398            Impact factor:   5.163


  88 in total

1.  Production of recombinant and tagged proteins in the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors:  S-V Albers; M Jonuscheit; S Dinkelaker; T Urich; A Kletzin; R Tampé; A J M Driessen; C Schleper
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

2.  How do thermophilic proteins and proteomes withstand high temperature?

Authors:  Lucas Sawle; Kingshuk Ghosh
Journal:  Biophys J       Date:  2011-07-06       Impact factor: 4.033

3.  N-terminal fusion of a hyperthermophilic chitin-binding domain to xylose isomerase from Thermotoga neapolitana enhances kinetics and thermostability of both free and immobilized enzymes.

Authors:  James M Harris; Kevin L Epting; Robert M Kelly
Journal:  Biotechnol Prog       Date:  2010 Jul-Aug

4.  Starch self-processing in transgenic sweet potato roots expressing a hyperthermophilic α-amylase.

Authors:  Monica C Santa-Maria; Craig G Yencho; Candace H Haigler; William F Thompson; Robert M Kelly; Bryon Sosinski
Journal:  Biotechnol Prog       Date:  2011-03-01

5.  Deletion strains reveal metabolic roles for key elemental sulfur-responsive proteins in Pyrococcus furiosus.

Authors:  Stephanie L Bridger; Sonya M Clarkson; Karen Stirrett; Megan B DeBarry; Gina L Lipscomb; Gerrit J Schut; Janet Westpheling; Robert A Scott; Michael W W Adams
Journal:  J Bacteriol       Date:  2011-09-30       Impact factor: 3.490

6.  Sulfur oxidation activities of pure and mixed thermophiles and sulfur speciation in bioleaching of chalcopyrite.

Authors:  Wei Zhu; Jin-Lan Xia; Yi Yang; Zhen-yuan Nie; Lei Zheng; Chen-yan Ma; Rui-yong Zhang; An-an Peng; Lu Tang; Guan-zhou Qiu
Journal:  Bioresour Technol       Date:  2010-11-26       Impact factor: 9.642

7.  VapC6, a ribonucleolytic toxin regulates thermophilicity in the crenarchaeote Sulfolobus solfataricus.

Authors:  Yukari Maezato; Amanda Daugherty; Karl Dana; Edith Soo; Charlotte Cooper; Sabrina Tachdjian; Robert M Kelly; Paul Blum
Journal:  RNA       Date:  2011-05-27       Impact factor: 4.942

Review 8.  Engineering the stability and the activity of a glycoside hydrolase.

Authors:  Beatrice Cobucci-Ponzano; Giuseppe Perugino; Mosè Rossi; Marco Moracci
Journal:  Protein Eng Des Sel       Date:  2010-10-27       Impact factor: 1.650

9.  Complementation of Sulfolobus solfataricus PBL2025 with an α-mannosidase: effects on surface attachment and biofilm formation.

Authors:  A Koerdt; S Jachlewski; A Ghosh; J Wingender; B Siebers; S-V Albers
Journal:  Extremophiles       Date:  2011-11-18       Impact factor: 2.395

10.  Heterologous expression and maturation of an NADP-dependent [NiFe]-hydrogenase: a key enzyme in biofuel production.

Authors:  Junsong Sun; Robert C Hopkins; Francis E Jenney; Patrick M McTernan; Michael W W Adams
Journal:  PLoS One       Date:  2010-05-06       Impact factor: 3.240

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  16 in total

Review 1.  Cellulolytic thermophilic microorganisms in white biotechnology: a review.

Authors:  Kalpana Sahoo; Rajesh Kumar Sahoo; Mahendra Gaur; Enketeswara Subudhi
Journal:  Folia Microbiol (Praha)       Date:  2019-05-17       Impact factor: 2.099

2.  Cellular Control of Viscosity Counters Changes in Temperature and Energy Availability.

Authors:  Laura B Persson; Vardhaan S Ambati; Onn Brandman
Journal:  Cell       Date:  2020-11-05       Impact factor: 41.582

3.  The importance and future of biochemical engineering.

Authors:  Timothy A Whitehead; Scott Banta; William E Bentley; Michael J Betenbaugh; Christina Chan; Douglas S Clark; Corinne A Hoesli; Michael C Jewett; Beth Junker; Mattheos Koffas; Rashmi Kshirsagar; Amanda Lewis; Chien-Ting Li; Costas Maranas; E Terry Papoutsakis; Kristala L J Prather; Steffen Schaffer; Laura Segatori; Ian Wheeldon
Journal:  Biotechnol Bioeng       Date:  2020-05-29       Impact factor: 4.530

4.  Engineering of the Hyperthermophilic Archaeon Thermococcus kodakarensis for Chitin-Dependent Hydrogen Production.

Authors:  Mehwish Aslam; Ayumi Horiuchi; Jan-Robert Simons; Savyasachee Jha; Masahiro Yamada; Toru Odani; Rikako Fujimoto; Yasuyuki Yamamoto; Ryoma Gunji; Tadayuki Imanaka; Tamotsu Kanai; Haruyuki Atomi
Journal:  Appl Environ Microbiol       Date:  2017-07-17       Impact factor: 4.792

5.  Engineering Novel and Improved Biocatalysts by Cell Surface Display.

Authors:  Mason R Smith; Eshita Khera; Fei Wen
Journal:  Ind Eng Chem Res       Date:  2015-01-20       Impact factor: 3.720

6.  The hydrophobic temperature dependence of amino acids directly calculated from protein structures.

Authors:  Erik van Dijk; Arlo Hoogeveen; Sanne Abeln
Journal:  PLoS Comput Biol       Date:  2015-05-22       Impact factor: 4.475

Review 7.  Anaerobic thermophiles.

Authors:  Francesco Canganella; Juergen Wiegel
Journal:  Life (Basel)       Date:  2014-02-26

8.  Molecular dynamics simulations of the Nip7 proteins from the marine deep- and shallow-water Pyrococcus species.

Authors:  Kirill E Medvedev; Nikolay A Alemasov; Yuri N Vorobjev; Elena V Boldyreva; Nikolay A Kolchanov; Dmitry A Afonnikov
Journal:  BMC Struct Biol       Date:  2014-10-15

Review 9.  Cell-surface engineering of yeasts for whole-cell biocatalysts.

Authors:  Mengqi Ye; Yuqi Ye; Zongjun Du; Guanjun Chen
Journal:  Bioprocess Biosyst Eng       Date:  2021-01-03       Impact factor: 3.210

10.  Cellulosic ethanol production via consolidated bioprocessing at 75 °C by engineered Caldicellulosiruptor bescii.

Authors:  Daehwan Chung; Minseok Cha; Elise N Snyder; James G Elkins; Adam M Guss; Janet Westpheling
Journal:  Biotechnol Biofuels       Date:  2015-10-06       Impact factor: 6.040

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