Literature DB >> 21732495

Radical acceleration of nuclear reprogramming by chromatin remodeling with the transactivation domain of MyoD.

Hiroyuki Hirai1, Tetsuya Tani, Nobuko Katoku-Kikyo, Steven Kellner, Peter Karian, Meri Firpo, Nobuaki Kikyo.   

Abstract

Induced pluripotent stem cells (iPSCs) can be created by reprogramming differentiated cells through introduction of defined genes, most commonly Oct4, Sox2, Klf4, and c-Myc (OSKM). However, this process is slow and extremely inefficient. Here, we demonstrate radical acceleration of iPSC creation with a fusion gene between Oct4 and the powerful transactivation domain (TAD) of MyoD (M(3)O). Transduction of M(3) O as well as Sox2, Klf4, and c-Myc into fibroblasts effectively remodeled patterns of DNA methylation, chromatin accessibility, histone modifications, and protein binding at pluripotency genes, raising the efficiency of making mouse and human iPSCs more than 50-fold in comparison to OSKM. These results identified that one of the most critical barriers to iPSC creation is poor chromatin accessibility and protein recruitment to pluripotency genes. The MyoD TAD has a capability of overcoming this problem. Our approach of fusing TADs to unrelated transcription factors has far-reaching implications as a powerful tool for transcriptional reprogramming beyond application to iPSC technology.
Copyright © 2011 AlphaMed Press.

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Year:  2011        PMID: 21732495      PMCID: PMC3431196          DOI: 10.1002/stem.684

Source DB:  PubMed          Journal:  Stem Cells        ISSN: 1066-5099            Impact factor:   6.277


  44 in total

Review 1.  Retrovirus-mediated gene transfer and expression cloning: powerful tools in functional genomics.

Authors:  Toshio Kitamura; Yuko Koshino; Fumi Shibata; Toshihiko Oki; Hideaki Nakajima; Tetsuya Nosaka; Hidetoshi Kumagai
Journal:  Exp Hematol       Date:  2003-11       Impact factor: 3.084

Review 2.  MyoD and the transcriptional control of myogenesis.

Authors:  Charlotte A Berkes; Stephen J Tapscott
Journal:  Semin Cell Dev Biol       Date:  2005 Aug-Oct       Impact factor: 7.727

Review 3.  Chromatin modifications and their function.

Authors:  Tony Kouzarides
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

4.  Interaction between Oct3/4 and Cdx2 determines trophectoderm differentiation.

Authors:  Hitoshi Niwa; Yayoi Toyooka; Daisuke Shimosato; Dan Strumpf; Kadue Takahashi; Rika Yagi; Janet Rossant
Journal:  Cell       Date:  2005-12-02       Impact factor: 41.582

5.  Myc influences global chromatin structure.

Authors:  Paul S Knoepfler; Xiao-yong Zhang; Pei Feng Cheng; Philip R Gafken; Steven B McMahon; Robert N Eisenman
Journal:  EMBO J       Date:  2006-05-25       Impact factor: 11.598

Review 6.  How is pluripotency determined and maintained?

Authors:  Hitoshi Niwa
Journal:  Development       Date:  2007-01-10       Impact factor: 6.868

7.  Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.

Authors:  Kazutoshi Takahashi; Shinya Yamanaka
Journal:  Cell       Date:  2006-08-10       Impact factor: 41.582

8.  Reciprocal transcriptional regulation of Pou5f1 and Sox2 via the Oct4/Sox2 complex in embryonic stem cells.

Authors:  Joon-Lin Chew; Yuin-Han Loh; Wensheng Zhang; Xi Chen; Wai-Leong Tam; Leng-Siew Yeap; Pin Li; Yen-Sin Ang; Bing Lim; Paul Robson; Huck-Hui Ng
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

9.  Generation of germline-competent induced pluripotent stem cells.

Authors:  Keisuke Okita; Tomoko Ichisaka; Shinya Yamanaka
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

10.  Generation of induced pluripotent stem cells without Myc from mouse and human fibroblasts.

Authors:  Masato Nakagawa; Michiyo Koyanagi; Koji Tanabe; Kazutoshi Takahashi; Tomoko Ichisaka; Takashi Aoi; Keisuke Okita; Yuji Mochiduki; Nanako Takizawa; Shinya Yamanaka
Journal:  Nat Biotechnol       Date:  2007-11-30       Impact factor: 54.908

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  41 in total

1.  Derivation of LIF-independent mouse iPS cells with modified Oct4.

Authors:  Hiroyuki Hirai; Meri Firpo; Nobuaki Kikyo
Journal:  Stem Cell Res       Date:  2015-08-17       Impact factor: 2.020

2.  Accelerated direct reprogramming of fibroblasts into cardiomyocyte-like cells with the MyoD transactivation domain.

Authors:  Hiroyuki Hirai; Nobuko Katoku-Kikyo; Susan A Keirstead; Nobuaki Kikyo
Journal:  Cardiovasc Res       Date:  2013-06-20       Impact factor: 10.787

3.  RNA-based Reprogramming of Human Primary Fibroblasts into Induced Pluripotent Stem Cells.

Authors:  Patrick S McGrath; Nicole Diette; Igor Kogut; Ganna Bilousova
Journal:  J Vis Exp       Date:  2018-11-26       Impact factor: 1.355

Review 4.  Discovery and progress of direct cardiac reprogramming.

Authors:  Hidenori Kojima; Masaki Ieda
Journal:  Cell Mol Life Sci       Date:  2017-02-14       Impact factor: 9.261

5.  Direct Reprogramming of Fibroblasts Into Smooth Muscle-Like Cells With Defined Transcription Factors-Brief Report.

Authors:  Hiroyuki Hirai; Bo Yang; Minerva T Garcia-Barrio; Oren Rom; Peter X Ma; Jifeng Zhang; Y Eugene Chen
Journal:  Arterioscler Thromb Vasc Biol       Date:  2018-09       Impact factor: 8.311

Review 6.  Controlling gene networks and cell fate with precision-targeted DNA-binding proteins and small-molecule-based genome readers.

Authors:  Asuka Eguchi; Garrett O Lee; Fang Wan; Graham S Erwin; Aseem Z Ansari
Journal:  Biochem J       Date:  2014-09-15       Impact factor: 3.857

Review 7.  Mechanisms for enhancing cellular reprogramming.

Authors:  Abdenour Soufi
Journal:  Curr Opin Genet Dev       Date:  2014-03-04       Impact factor: 5.578

8.  OCT4 and SOX2 Work as Transcriptional Activators in Reprogramming Human Fibroblasts.

Authors:  Santosh Narayan; Gene Bryant; Shivangi Shah; Georgina Berrozpe; Mark Ptashne
Journal:  Cell Rep       Date:  2017-08-15       Impact factor: 9.423

Review 9.  Epigenetics of reprogramming to induced pluripotency.

Authors:  Bernadett Papp; Kathrin Plath
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

Review 10.  Pluripotent stem cells and gene therapy.

Authors:  Pavel Simara; Jason A Motl; Dan S Kaufman
Journal:  Transl Res       Date:  2013-01-23       Impact factor: 7.012

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