Literature DB >> 21730186

Mechanism of activation gating in the full-length KcsA K+ channel.

Serdar Uysal1, Luis G Cuello, D Marien Cortes, Shohei Koide, Anthony A Kossiakoff, Eduardo Perozo.   

Abstract

Using a constitutively active channel mutant, we solved the structure of full-length KcsA in the open conformation at 3.9 Å. The structure reveals that the activation gate expands about 20 Å, exerting a strain on the bulge helices in the C-terminal domain and generating side windows large enough to accommodate hydrated K(+) ions. Functional and spectroscopic analysis of the gating transition provides direct insight into the allosteric coupling between the activation gate and the selectivity filter. We show that the movement of the inner gate helix is transmitted to the C-terminus as a straightforward expansion, leading to an upward movement and the insertion of the top third of the bulge helix into the membrane. We suggest that by limiting the extent to which the inner gate can open, the cytoplasmic domain also modulates the level of inactivation occurring at the selectivity filter.

Mesh:

Substances:

Year:  2011        PMID: 21730186      PMCID: PMC3141920          DOI: 10.1073/pnas.1105112108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  21 in total

1.  Structural rearrangements underlying K+-channel activation gating.

Authors:  E Perozo; D M Cortes; L G Cuello
Journal:  Science       Date:  1999-07-02       Impact factor: 47.728

2.  Potassium channel gating observed with site-directed mass tagging.

Authors:  Brent L Kelly; Adrian Gross
Journal:  Nat Struct Biol       Date:  2003-04

3.  Structural characterization and pH-induced conformational transition of full-length KcsA.

Authors:  Jochen Zimmer; Declan A Doyle; J Günter Grossmann
Journal:  Biophys J       Date:  2005-12-09       Impact factor: 4.033

4.  Three-dimensional architecture and gating mechanism of a K+ channel studied by EPR spectroscopy.

Authors:  E Perozo; D M Cortes; L G Cuello
Journal:  Nat Struct Biol       Date:  1998-06

5.  pH-dependent gating in the Streptomyces lividans K+ channel.

Authors:  L G Cuello; J G Romero; D M Cortes; E Perozo
Journal:  Biochemistry       Date:  1998-03-10       Impact factor: 3.162

6.  HOLE: a program for the analysis of the pore dimensions of ion channel structural models.

Authors:  O S Smart; J G Neduvelil; X Wang; B A Wallace; M S Sansom
Journal:  J Mol Graph       Date:  1996-12

7.  Cytoplasmic domain structures of Kir2.1 and Kir3.1 show sites for modulating gating and rectification.

Authors:  Scott Pegan; Christine Arrabit; Wei Zhou; Witek Kwiatkowski; Anthony Collins; Paul A Slesinger; Senyon Choe
Journal:  Nat Neurosci       Date:  2005-02-20       Impact factor: 24.884

8.  Structural basis for modulation and agonist specificity of HCN pacemaker channels.

Authors:  William N Zagotta; Nelson B Olivier; Kevin D Black; Edgar C Young; Rich Olson; Eric Gouaux
Journal:  Nature       Date:  2003-09-11       Impact factor: 49.962

9.  Structure of the human BK channel Ca2+-activation apparatus at 3.0 A resolution.

Authors:  Peng Yuan; Manuel D Leonetti; Alexander R Pico; Yichun Hsiung; Roderick MacKinnon
Journal:  Science       Date:  2010-05-27       Impact factor: 47.728

10.  Molecular architecture of full-length KcsA: role of cytoplasmic domains in ion permeation and activation gating.

Authors:  D M Cortes; L G Cuello; E Perozo
Journal:  J Gen Physiol       Date:  2001-02       Impact factor: 4.086

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  37 in total

1.  Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.

Authors:  Giovanni Gonzalez-Gutierrez; Tiit Lukk; Vinayak Agarwal; David Papke; Satish K Nair; Claudio Grosman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

2.  Transmembrane allosteric coupling of the gates in a potassium channel.

Authors:  Benjamin J Wylie; Manasi P Bhate; Ann E McDermott
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-16       Impact factor: 11.205

3.  Importance of lipid-pore loop interface for potassium channel structure and function.

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-23       Impact factor: 11.205

4.  Architecture and conformational switch mechanism of the ryanodine receptor.

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Journal:  Nature       Date:  2014-12-01       Impact factor: 49.962

Review 5.  Channel function reconstitution and re-animation: a single-channel strategy in the postcrystal age.

Authors:  Shigetoshi Oiki
Journal:  J Physiol       Date:  2015-05-14       Impact factor: 5.182

6.  Targeted molecular dynamics (TMD) of the full-length KcsA potassium channel: on the role of the cytoplasmic domain in the opening process.

Authors:  Yan Li; Florent Barbault; Michel Delamar; Ruisheng Zhang; Rongjing Hu
Journal:  J Mol Model       Date:  2013-01-05       Impact factor: 1.810

7.  Interaction of local anesthetics with the K (+) channel pore domain: KcsA as a model for drug-dependent tetramer stability.

Authors:  Noel W Gray; Boris S Zhorov; Edward G Moczydlowski
Journal:  Channels (Austin)       Date:  2013-04-01       Impact factor: 2.581

8.  Probing Conformational Changes during the Gating Cycle of a Potassium Channel in Lipid Bilayers.

Authors:  Elwin A W van der Cruijsen; Alexander V Prokofyev; Olaf Pongs; Marc Baldus
Journal:  Biophys J       Date:  2017-01-10       Impact factor: 4.033

Review 9.  Using X-ray Footprinting and Mass Spectrometry to Study the Structure and Function of Membrane Proteins.

Authors:  Sayan Gupta
Journal:  Protein Pept Lett       Date:  2019       Impact factor: 1.890

Review 10.  Ion channel associated diseases: overview of molecular mechanisms.

Authors:  Mark A Zaydman; Jonathan R Silva; Jianmin Cui
Journal:  Chem Rev       Date:  2012-11-14       Impact factor: 60.622

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