Literature DB >> 2168882

Proton NMR study of the comparative electronic/magnetic properties and dynamics of the acid in equilibrium with alkaline transition in a series of ferricytochromes c'.

G N La Mar1, J T Jackson, L B Dugad, M A Cusanovich, R G Bartsch.   

Abstract

The proton NMR spectra of ferricytochrome c' from Rhodopseudomonas palustris, Rhodospirillum molischianum, Rhodospirillum rubrum, and Chromatium vinosum have been investigated for the purpose of further elucidating the common spectral and/or structural properties for this subclass of cytochromes in the acidic and alkaline forms, and to characterize in detail the dynamics and structural basis for this acid in equilibrium with alkaline transition. The identification of strongly upfield-shifted meso-H peaks in all but C. vinosum ferricytochrome c' at weakly acidic to neutral pH is consistent with, but not proof for, S = 3/2 character for the spin state of C. vinosum, but argues for primarily S = 5/2 character for the other three proteins. Hence, we conclude that the quantum mechanically mixed S = 3/2, S = 5/2 spin ground state of neutral pH C. vinosum ferricytochrome c' is an anomaly rather than a characteristic of this class of proteins. The 1H NMR spectra of ferricytochromes c' at alkaline pH again exhibit strong similarities among all members except that for C. vinosum. Two pK values are observed for ferricytochrome c' for R. molischianum and C. vinosum, of which the higher value pK is accompanied by significant line broadening, as found earlier for the proteins from both R. rubrum and R. palustris. Detailed analysis of the exchange line broadening for all four proteins reveals that hydrolysis is the rate-limiting step, with base catalysis occurring at about the same rate in the diffusion control limit for all four proteins. The variable first order dissociation rates of the alkaline species reveal differential stabilities of that species in the order R. palustris greater than R. molischianum greater than R. rubrum much greater than C. vinosum. The rates of exchange of the axial His imidazole labile proton was determined by linewidth and saturation transfer analysis and shown to occur via base catalysis at the same diffusion control rate as found for the acid----alkaline transition for the oxidized protein, and support the proposal that the acid----alkaline transition involves simply the abstraction of a proton from the neutral His imidazole to yield an imidazolate.

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Year:  1990        PMID: 2168882

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  NMR-validated structural model for oxidized Rhodopseudomonas palustris cytochrome c(556).

Authors:  Ivano Bertini; Jasmin Faraone-Mennella; Harry B Gray; Claudio Luchinat; Giacomo Parigi; Jay R Winkler
Journal:  J Biol Inorg Chem       Date:  2004-01-20       Impact factor: 3.358

Review 2.  Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.

Authors:  Jing Liu; Saumen Chakraborty; Parisa Hosseinzadeh; Yang Yu; Shiliang Tian; Igor Petrik; Ambika Bhagi; Yi Lu
Journal:  Chem Rev       Date:  2014-04-23       Impact factor: 60.622

3.  Assignment of the ferriheme resonances of the high-spin forms of nitrophorins 1 and 4 by 1H NMR spectroscopy: comparison to structural data obtained from X-ray crystallography.

Authors:  Tatiana Kh Shokhireva; Kevin M Smith; Robert E Berry; Nikolai V Shokhirev; Celia A Balfour; Hongjun Zhang; F Ann Walker
Journal:  Inorg Chem       Date:  2007-01-08       Impact factor: 5.165

4.  Spectroscopic characterization of a newly isolated cytochrome P450 from Rhodococcus rhodochrous.

Authors:  L Banci; I Bertini; L D Eltis; R Pierattelli
Journal:  Biophys J       Date:  1993-08       Impact factor: 4.033

5.  Redox infrared markers of the heme and axial ligands in microperoxidase: Bases for the analysis of c-type cytochromes.

Authors:  Laure Marboutin; Alain Boussac; Catherine Berthomieu
Journal:  J Biol Inorg Chem       Date:  2006-06-17       Impact factor: 3.358

6.  Assignment of the 1H NMR resonances of protein residues in close proximity to the heme of the nitrophorins: similarities and differences among the four proteins from the saliva of the adult blood-sucking insect Rhodnius prolixus.

Authors:  Tatiana K Shokhireva; F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2012-06-19       Impact factor: 3.358

7.  Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: stability, structure, and dynamics of axial ligand complexes.

Authors:  Tatjana Kh Shokhireva; Robert E Berry; Elizabeth Uno; Celia A Balfour; Hongjun Zhang; F Ann Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-17       Impact factor: 11.205

8.  Assignment of the ferriheme resonances of high- and low-spin forms of the symmetrical hemin-reconstituted nitrophorins 1-4 by 1H and 13C NMR spectroscopy: the dynamics of heme ruffling deformations.

Authors:  Tatiana K Shokhireva; Nikolai V Shokhirev; Robert E Berry; Hongjun Zhang; F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2008-05-06       Impact factor: 3.358

9.  Heme-bound SiaA from Streptococcus pyogenes: Effects of mutations and oxidation state on protein stability.

Authors:  Neval Akbas; Elizabeth B Draganova; Darci R Block; Brian R Sook; Yau Fong Chan; Joy Zhuo; Zehava Eichenbaum; Kenton R Rodgers; Dabney W Dixon
Journal:  J Inorg Biochem       Date:  2015-11-14       Impact factor: 4.155

Review 10.  Review: studies of ferric heme proteins with highly anisotropic/highly axial low spin (S = 1/2) electron paramagnetic resonance signals with bis-histidine and histidine-methionine axial iron coordination.

Authors:  Giorgio Zoppellaro; Kara L Bren; Amy A Ensign; Espen Harbitz; Ravinder Kaur; Hans-Petter Hersleth; Ulf Ryde; Lars Hederstedt; K Kristoffer Andersson
Journal:  Biopolymers       Date:  2009-12       Impact factor: 2.505

  10 in total

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