Literature DB >> 16783544

Redox infrared markers of the heme and axial ligands in microperoxidase: Bases for the analysis of c-type cytochromes.

Laure Marboutin1, Alain Boussac, Catherine Berthomieu.   

Abstract

Structural changes accompanying the change in the redox state of microperoxidase-8 (MP8), the heme-octapeptide obtained from cytochrome c, and its complexes with (methyl)imidazole ligands were studied by electrochemically induced Fourier transform IR (FTIR) difference spectroscopy. To correlate with confidence IR modes with a specific electronic state of the iron, we used UV-vis and electron paramagnetic resonance spectroscopy to define precisely the heme spin state in the samples at the millimolar concentration of MP8 required for FTIR difference spectroscopy. We identified four intense redox-sensitive IR heme markers, nu38 at 1,569 cm(-1) (ox)/1,554 cm(-1) (red), nu42 at 1,264 cm(-1) (ox)/1,242 cm(-1) (red), nu43 at 1,146 cm(-1) (ox), and nu44 at 1,124-1,128 cm(-1) (ox). The intensity of nu42 and nu43 was clearly enhanced for low-spin imidazole-MP8 complexes, while that of nu44 increased for high-spin MP8. These modes can thus be used as IR markers of the iron spin state in MP8 and related c-type cytochromes. Moreover, one redox-sensitive band at 1,044 cm(-1) (red) is attributed to an IR marker specific of c-type hemes, possibly the delta(CbH3)(2,4) heme mode. Other redox-sensitive IR bands were assigned to the MP8 peptide backbone and to the fifth and sixth axial heme ligands. The distinct IR frequencies for imidazole (1,075 cm(-1)) and histidine (1,105 cm(-1)) side chains in the imidazole-MP8 complex allowed us to provide the first direct determination of their pKa at pH 9 and 12, respectively.

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Year:  2006        PMID: 16783544     DOI: 10.1007/s00775-006-0119-4

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  55 in total

1.  Electrochemical and spectroscopic investigations of the cytochrome bc1 complex from Rhodobacter capsulatus.

Authors:  F Baymann; D E Robertson; P L Dutton; W Mäntele
Journal:  Biochemistry       Date:  1999-10-05       Impact factor: 3.162

Review 2.  Resonance Raman spectroscopy of c-type cytochromes.

Authors:  A Desbois
Journal:  Biochimie       Date:  1994       Impact factor: 4.079

3.  Structure of a histidine ligand in the photosynthetic oxygen-evolving complex as studied by light-induced fourier transform infrared difference spectroscopy.

Authors:  T Noguchi; Y Inoue; X S Tang
Journal:  Biochemistry       Date:  1999-08-03       Impact factor: 3.162

4.  Fourier transform infrared evidence of proton uptake by glutamate L212 upon reduction of the secondary quinone QB in the photosynthetic reaction center from Rhodobacter capsulatus.

Authors:  E Nabedryk; J Breton; H M Joshi; D K Hanson
Journal:  Biochemistry       Date:  2000-11-28       Impact factor: 3.162

5.  Electrochemical and ultraviolet/visible/infrared spectroscopic analysis of heme a and a3 redox reactions in the cytochrome c oxidase from Paracoccus denitrificans: separation of heme a and a3 contributions and assignment of vibrational modes.

Authors:  P Hellwig; S Grzybek; J Behr; B Ludwig; H Michel; W Mäntele
Journal:  Biochemistry       Date:  1999-02-09       Impact factor: 3.162

6.  Crystal structure of cytochrome c3 from Desulfovibrio desulfuricans Norway at 1.7 A resolution.

Authors:  M Czjzek; F Payan; F Guerlesquin; M Bruschi; R Haser
Journal:  J Mol Biol       Date:  1994-11-04       Impact factor: 5.469

7.  Protein conformational changes in tetraheme cytochromes detected by FTIR spectroelectrochemistry: Desulfovibrio desulfuricans Norway 4 and Desulfovibrio gigas cytochromes c3.

Authors:  D D Schlereth; V M Fernández; W Mäntele
Journal:  Biochemistry       Date:  1993-09-07       Impact factor: 3.162

8.  Bicarbonate binding to the non-heme iron of photosystem II investigated by Fourier transform infrared difference spectroscopy and 13C-labeled bicarbonate.

Authors:  R Hienerwadel; C Berthomieu
Journal:  Biochemistry       Date:  1995-12-19       Impact factor: 3.162

9.  Effects of axial ligand replacement on the redox potential of cytochrome c.

Authors:  G Liu; W Shao; S Zhu; W Tang
Journal:  J Inorg Biochem       Date:  1995-11-01       Impact factor: 4.155

10.  Refined structure of cytochrome c3 at 1.8 A resolution.

Authors:  Y Higuchi; M Kusunoki; Y Matsuura; N Yasuoka; M Kakudo
Journal:  J Mol Biol       Date:  1984-01-05       Impact factor: 5.469

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  1 in total

1.  Transcriptomic, Proteomic, and Bioelectrochemical Characterization of an Exoelectrogen Geobacter soli Grown With Different Electron Acceptors.

Authors:  Xixi Cai; Lingyan Huang; Guiqin Yang; Zhen Yu; Junlin Wen; Shungui Zhou
Journal:  Front Microbiol       Date:  2018-06-15       Impact factor: 5.640

  1 in total

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