Literature DB >> 21685280

Genome sequence of Lactococcus garvieae 8831, isolated from rainbow trout lactococcosis outbreaks in Spain.

Mónica Aguado-Urda1, Guillermo H López-Campos, Alicia Gibello, M Teresa Cutuli, Victoria López-Alonso, José F Fernández-Garayzábal, M Mar Blanco.   

Abstract

Lactococcus garvieae is the etiological agent of lactococcosis, one of the most important disease threats to the sustainability of the rainbow trout farming industry. Here, we present the draft genome sequence of Lactococcus garvieae strain 8831, isolated from diseased rainbow trout, which is composed of 2,087,276 bp with a G+C content of 38%.

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Year:  2011        PMID： 21685280      PMCID： PMC3147678          DOI： 10.1128/JB.05326-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

Review 3.  Lactococcus garvieae in fish: a review.

Authors:  Daniel Vendrell; José Luis Balcázar; Imanol Ruiz-Zarzuela; Ignacio de Blas; Olivia Gironés; José Luis Múzquiz
Journal:  Comp Immunol Microbiol Infect Dis       Date:  2006-08-28       Impact factor: 2.268

Review 4.  A genomic perspective on protein families.

Authors:  R L Tatusov; E V Koonin; D J Lipman
Journal:  Science       Date:  1997-10-24       Impact factor: 47.728

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Antimicrobial susceptibilities of Lactococcus lactis and Lactococcus garvieae and a proposed method to discriminate between them.

Authors:  J A Elliott; R R Facklam
Journal:  J Clin Microbiol       Date:  1996-05       Impact factor: 5.948

7.  Resistance to serum killing may contribute to differences in the abilities of capsulate and non-capsulated isolates of lactococcus garvieae to cause disease in rainbow trout (Oncorhynchus mykiss L.).

Authors:  Andrew C Barnes; Céline Guyot; Bjarne G Hanse; Kevin Mackenzie; Michael T Horn; Anthony E Ellis
Journal:  Fish Shellfish Immunol       Date:  2002-02       Impact factor: 4.581

8.  The Universal Protein Resource (UniProt).

Authors:  Amos Bairoch; Rolf Apweiler; Cathy H Wu; Winona C Barker; Brigitte Boeckmann; Serenella Ferro; Elisabeth Gasteiger; Hongzhan Huang; Rodrigo Lopez; Michele Magrane; Maria J Martin; Darren A Natale; Claire O'Donovan; Nicole Redaschi; Lai-Su L Yeh
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
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  15 in total

1.  Genome sequence of the bacteriocin-producing strain Lactococcus garvieae DCC43.

Authors:  Christina Gabrielsen; Dag A Brede; Pablo E Hernández; Ingolf F Nes; Dzung B Diep
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

2.  Genome sequence of Lactococcus garvieae IPLA 31405, a bacteriocin-producing, tetracycline-resistant strain isolated from a raw-milk cheese.

Authors:  Ana Belén Flórez; Pilar Reimundo; Susana Delgado; Elena Fernández; Angel Alegría; José A Guijarro; Baltasar Mayo
Journal:  J Bacteriol       Date:  2012-09       Impact factor: 3.490

3.  Detection of virulence-related genes in Lactococcus garvieae and their expression in response to different conditions.

Authors:  Giovanni Eraclio; Giovanni Ricci; Mattia Quattrini; Paolo Moroni; Maria Grazia Fortina
Journal:  Folia Microbiol (Praha)       Date:  2017-11-13       Impact factor: 2.099

4.  Genome sequences of Lactococcus garvieae TB25, isolated from Italian cheese, and Lactococcus garvieae LG9, isolated from Italian rainbow trout.

Authors:  Giovanni Ricci; Chiara Ferrario; Francesca Borgo; Alessandro Rollando; Maria Grazia Fortina
Journal:  J Bacteriol       Date:  2012-03       Impact factor: 3.490

5.  First report of human acute acalculous cholecystitis caused by the fish pathogen Lactococcus garvieae.

Authors:  Ji Hyung Kim; Jin Go; Chong Rae Cho; Jae Il Kim; Myung Soo Lee; Se Chang Park
Journal:  J Clin Microbiol       Date:  2012-12-12       Impact factor: 5.948

6.  Isolation of Lactococcus garvieae strain TRF1 from the fecal material of a Timber Rattlesnake.

Authors:  Richard William McLaughlin; Philip A Cochran; Scot E Dowd
Journal:  Curr Microbiol       Date:  2014-03-05       Impact factor: 2.188

7.  Garvicin A, a novel class IId bacteriocin from Lactococcus garvieae that inhibits septum formation in L. garvieae strains.

Authors:  Antonio Maldonado-Barragán; Nivia Cárdenas; Beatriz Martínez; José Luis Ruiz-Barba; José F Fernández-Garayzábal; Juan M Rodríguez; Alicia Gibello
Journal:  Appl Environ Microbiol       Date:  2013-05-10       Impact factor: 4.792

8.  Characterization of plasmids in a human clinical strain of Lactococcus garvieae.

Authors:  Mónica Aguado-Urda; Alicia Gibello; M Mar Blanco; Guillermo H López-Campos; M Teresa Cutuli; José F Fernández-Garayzábal
Journal:  PLoS One       Date:  2012-06-29       Impact factor: 3.240

9.  Comparative Genomic Analysis of Lactococcus garvieae Strains Isolated from Different Sources Reveals Candidate Virulence Genes.

Authors:  Eiji Miyauchi; Hidehiro Toh; Akiyo Nakano; Soichi Tanabe; Hidetoshi Morita
Journal:  Int J Microbiol       Date:  2012-05-09

10.  Genome Sequences of Two Lactococcus garvieae Strains Isolated from Meat.

Authors:  Giovanni Ricci; Chiara Ferrario; Francesca Borgo; Giovanni Eraclio; Maria Grazia Fortina
Journal:  Genome Announc       Date:  2013-01-15
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