Literature DB >> 21660058

Regulation of mammalian DNA methyltransferases: a route to new mechanisms.

Hélène Denis1, Matladi N Ndlovu, François Fuks.   

Abstract

DNA methyltransferases (DNMTs) establish and maintain DNA methylation patterns at specific regions of the genome, thereby contributing to gene regulation. It is becoming evident that an intricate web of pathways target DNMTs to these genomic regions. Here, we review the understanding of these regulatory mechanisms and provide an overview of the new findings, emphasizing the emerging scenario in which several levels of regulation are coordinated to control DNMTs. The mechanisms involved include the dynamic interplay between interdependent post-translational modifications that regulate DNMTs, post-transcriptional regulation by miRNAs and the emerging role of non-coding RNA in targeting mammalian DNMTs. The analysis of these mechanisms is imperative to the understanding of the role of DNA methylation in regulating gene expression during development and in disease.

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Year:  2011        PMID: 21660058      PMCID: PMC3128952          DOI: 10.1038/embor.2011.110

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  86 in total

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Authors:  Kathryn E Gardner; C David Allis; Brian D Strahl
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2.  Potential role of miR-29b in modulation of Dnmt3a and Dnmt3b expression in primordial germ cells of female mouse embryos.

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Review 3.  Structure and function of mammalian DNA methyltransferases.

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Journal:  Chembiochem       Date:  2010-11-29       Impact factor: 3.164

Review 4.  Coordinated chromatin control: structural and functional linkage of DNA and histone methylation.

Authors:  Xiaodong Cheng; Robert M Blumenthal
Journal:  Biochemistry       Date:  2010-04-13       Impact factor: 3.162

5.  PRMT5-mediated methylation of histone H4R3 recruits DNMT3A, coupling histone and DNA methylation in gene silencing.

Authors:  Quan Zhao; Gerhard Rank; Yuen T Tan; Haitao Li; Robert L Moritz; Richard J Simpson; Loretta Cerruti; David J Curtis; Dinshaw J Patel; C David Allis; John M Cunningham; Stephen M Jane
Journal:  Nat Struct Mol Biol       Date:  2009-02-22       Impact factor: 15.369

6.  DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes.

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Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

7.  Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin.

Authors:  Bernhard Lehnertz; Yoshihide Ueda; Alwin A H A Derijck; Ulrich Braunschweig; Laura Perez-Burgos; Stefan Kubicek; Taiping Chen; En Li; Thomas Jenuwein; Antoine H F M Peters
Journal:  Curr Biol       Date:  2003-07-15       Impact factor: 10.834

8.  Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail.

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Journal:  Nucleic Acids Res       Date:  2010-03-11       Impact factor: 16.971

9.  Nucleosomes containing methylated DNA stabilize DNA methyltransferases 3A/3B and ensure faithful epigenetic inheritance.

Authors:  Shikhar Sharma; Daniel D De Carvalho; Shinwu Jeong; Peter A Jones; Gangning Liang
Journal:  PLoS Genet       Date:  2011-02-03       Impact factor: 5.917

10.  Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells.

Authors:  Madeleine P Ball; Jin Billy Li; Yuan Gao; Je-Hyuk Lee; Emily M LeProust; In-Hyun Park; Bin Xie; George Q Daley; George M Church
Journal:  Nat Biotechnol       Date:  2009-03-29       Impact factor: 54.908

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  142 in total

Review 1.  Enhancers: emerging roles in cell fate specification.

Authors:  Chin-Tong Ong; Victor G Corces
Journal:  EMBO Rep       Date:  2012-04-10       Impact factor: 8.807

2.  Promoter methylation confers kidney-specific expression of the Klotho gene.

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Journal:  FASEB J       Date:  2012-07-10       Impact factor: 5.191

Review 3.  Endothelial epigenetics in biomechanical stress: disturbed flow-mediated epigenomic plasticity in vivo and in vitro.

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Review 4.  Aberrant DNA methylation in human cancers.

Authors:  Wen Li; Bi-Feng Chen
Journal:  J Huazhong Univ Sci Technolog Med Sci       Date:  2013-12-13

5.  Age-related macular degeneration (AMD) mitochondria modulate epigenetic mechanisms in retinal pigment epithelial cells.

Authors:  Sonali Nashine; Anthony B Nesburn; Baruch D Kuppermann; M Cristina Kenney
Journal:  Exp Eye Res       Date:  2019-06-19       Impact factor: 3.467

Review 6.  Dynamics of DNA methylation in aging and Alzheimer's disease.

Authors:  Hasan A Irier; Peng Jin
Journal:  DNA Cell Biol       Date:  2012-02-07       Impact factor: 3.311

Review 7.  Signaling circuitries controlling stem cell fate: to be or not to be.

Authors:  Ramiro Iglesias-Bartolome; J Silvio Gutkind
Journal:  Curr Opin Cell Biol       Date:  2011-08-29       Impact factor: 8.382

Review 8.  DNA Methylation in Basal Metazoans: Insights from Ctenophores.

Authors:  Emily C Dabe; Rachel S Sanford; Andrea B Kohn; Yelena Bobkova; Leonid L Moroz
Journal:  Integr Comp Biol       Date:  2015-07-14       Impact factor: 3.326

9.  Black raspberries protectively regulate methylation of Wnt pathway genes in precancerous colon tissue.

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10.  Altering TET dioxygenase levels within physiological range affects DNA methylation dynamics of HEK293 cells.

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Journal:  Epigenetics       Date:  2015-07-17       Impact factor: 4.528

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