Literature DB >> 21623844

Enlightening the life sciences: the history of halobacterial and microbial rhodopsin research.

Mathias Grote1, Maureen A O'Malley.   

Abstract

The history of research on microbial rhodopsins offers a novel perspective on the history of the molecular life sciences. Events in this history play important roles in the development of fields such as general microbiology, membrane research, bioenergetics, metagenomics and, very recently, neurobiology. New concepts, techniques, methods and fields have arisen as a result of microbial rhodopsin investigations. In addition, the history of microbial rhodopsins sheds light on the dynamic connections between basic and applied science, and hypothesis-driven and data-driven approaches. The story begins with the late nineteenth century discovery of microorganisms on salted fish and leads into ecological and taxonomical studies of halobacteria in hypersaline environments. These programmes were built on by the discovery of bacteriorhodopsin in organisms that are part of what is now known as the archaeal genus Halobacterium. The transfer of techniques from bacteriorhodopsin studies to the metagenomic discovery of proteorhodopsin in 2000 further extended the field. Microbial rhodopsins have also been used as model systems to understand membrane protein structure and function, and they have become the target of technological applications such as optogenetics and nanotechnology. Analysing the connections between these historical episodes provides a rich example of how science works over longer time periods, especially with regard to the transfer of materials, methods and concepts between different research fields.
© 2011 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

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Year:  2011        PMID: 21623844     DOI: 10.1111/j.1574-6976.2011.00281.x

Source DB:  PubMed          Journal:  FEMS Microbiol Rev        ISSN: 0168-6445            Impact factor:   16.408


  18 in total

1.  Characterization of a Cyanobacterial Chloride-pumping Rhodopsin and Its Conversion into a Proton Pump.

Authors:  Takatoshi Hasemi; Takashi Kikukawa; Naoki Kamo; Makoto Demura
Journal:  J Biol Chem       Date:  2015-11-17       Impact factor: 5.157

2.  The Bacterial Cell Wall in the Antibiotic Era: An Ontology in Transit Between Morphology and Metabolism, 1940s-1960s.

Authors:  María Jesús Santesmases
Journal:  J Hist Biol       Date:  2016-02       Impact factor: 1.326

3.  Nonphotosynthetic pigments as potential biosignatures.

Authors:  Edward W Schwieterman; Charles S Cockell; Victoria S Meadows
Journal:  Astrobiology       Date:  2015-05-05       Impact factor: 4.335

4.  Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump.

Authors:  Hideaki E Kato; Keiichi Inoue; Rei Abe-Yoshizumi; Yoshitaka Kato; Hikaru Ono; Masae Konno; Shoko Hososhima; Toru Ishizuka; Mohammad Razuanul Hoque; Hirofumi Kunitomo; Jumpei Ito; Susumu Yoshizawa; Keitaro Yamashita; Mizuki Takemoto; Tomohiro Nishizawa; Reiya Taniguchi; Kazuhiro Kogure; Andrés D Maturana; Yuichi Iino; Hiromu Yawo; Ryuichiro Ishitani; Hideki Kandori; Osamu Nureki
Journal:  Nature       Date:  2015-04-06       Impact factor: 49.962

5.  Purple matter, membranes and 'molecular pumps' in rhodopsin research (1960s-1980s).

Authors:  Mathias Grote
Journal:  J Hist Biol       Date:  2013       Impact factor: 1.326

6.  Nature's toolkit for microbial rhodopsin ion pumps.

Authors:  Oded Béjà; Janos K Lanyi
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-15       Impact factor: 11.205

Review 7.  Marine Bacterial and Archaeal Ion-Pumping Rhodopsins: Genetic Diversity, Physiology, and Ecology.

Authors:  Jarone Pinhassi; Edward F DeLong; Oded Béjà; José M González; Carlos Pedrós-Alió
Journal:  Microbiol Mol Biol Rev       Date:  2016-09-14       Impact factor: 11.056

Review 8.  Post-translation modification in Archaea: lessons from Haloferax volcanii and other haloarchaea.

Authors:  Jerry Eichler; Julie Maupin-Furlow
Journal:  FEMS Microbiol Rev       Date:  2012-12-20       Impact factor: 16.408

9.  Whole-genome comparison between the type strain of Halobacterium salinarum (DSM 3754T ) and the laboratory strains R1 and NRC-1.

Authors:  Friedhelm Pfeiffer; Gerald Losensky; Anita Marchfelder; Bianca Habermann; Mike Dyall-Smith
Journal:  Microbiologyopen       Date:  2019-12-03       Impact factor: 3.139

10.  Temperature Dependence of the Krokinobacter rhodopsin 2 Kinetics.

Authors:  Peter Eberhardt; Chavdar Slavov; Janina Sörmann; Christian Bamann; Markus Braun; Josef Wachtveitl
Journal:  Biophys J       Date:  2020-12-19       Impact factor: 4.033

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