Literature DB >> 23167813

Post-translation modification in Archaea: lessons from Haloferax volcanii and other haloarchaea.

Jerry Eichler1, Julie Maupin-Furlow.   

Abstract

As an ever-growing number of genome sequences appear, it is becoming increasingly clear that factors other than genome sequence impart complexity to the proteome. Of the various sources of proteomic variability, post-translational modifications (PTMs) most greatly serve to expand the variety of proteins found in the cell. Likewise, modulating the rates at which different proteins are degraded also results in a constantly changing cellular protein profile. While both strategies for generating proteomic diversity are adopted by organisms across evolution, the responsible pathways and enzymes in Archaea are often less well described than are their eukaryotic and bacterial counterparts. Studies on halophilic archaea, in particular Haloferax volcanii, originally isolated from the Dead Sea, are helping to fill the void. In this review, recent developments concerning PTMs and protein degradation in the haloarchaea are discussed.
© 2012 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

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Year:  2012        PMID: 23167813      PMCID: PMC3593991          DOI: 10.1111/1574-6976.12012

Source DB:  PubMed          Journal:  FEMS Microbiol Rev        ISSN: 0168-6445            Impact factor:   16.408


  231 in total

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Review 2.  Archaeal protein kinases and protein phosphatases: insights from genomics and biochemistry.

Authors:  Peter J Kennelly
Journal:  Biochem J       Date:  2003-03-01       Impact factor: 3.857

3.  Cloning, expression, and purification of functional Sec11a and Sec11b, type I signal peptidases of the archaeon Haloferax volcanii.

Authors:  Amir Fine; Vered Irihimovitch; Idit Dahan; Zvia Konrad; Jerry Eichler
Journal:  J Bacteriol       Date:  2006-03       Impact factor: 3.490

Review 4.  Signal processing in complex chemotaxis pathways.

Authors:  Steven L Porter; George H Wadhams; Judith P Armitage
Journal:  Nat Rev Microbiol       Date:  2011-02-01       Impact factor: 60.633

5.  The primary structure of a procaryotic glycoprotein. Cloning and sequencing of the cell surface glycoprotein gene of halobacteria.

Authors:  J Lechner; M Sumper
Journal:  J Biol Chem       Date:  1987-07-15       Impact factor: 5.157

Review 6.  Protein glycosylation in Archaea: sweet and extreme.

Authors:  Doron Calo; Lina Kaminski; Jerry Eichler
Journal:  Glycobiology       Date:  2010-04-05       Impact factor: 4.313

Review 7.  The dolichol pathway of N-linked glycosylation.

Authors:  P Burda; M Aebi
Journal:  Biochim Biophys Acta       Date:  1999-01-06

8.  Genetic and proteomic analyses of a proteasome-activating nucleotidase A mutant of the haloarchaeon Haloferax volcanii.

Authors:  P Aaron Kirkland; Malgorzata A Gil; Ivanka M Karadzic; Julie A Maupin-Furlow
Journal:  J Bacteriol       Date:  2007-10-26       Impact factor: 3.490

9.  Halobacterial flagellins are sulfated glycoproteins.

Authors:  F Wieland; G Paul; M Sumper
Journal:  J Biol Chem       Date:  1985-12-05       Impact factor: 5.157

Review 10.  Protein glycosylation in bacterial mucosal pathogens.

Authors:  Christine M Szymanski; Brendan W Wren
Journal:  Nat Rev Microbiol       Date:  2005-03       Impact factor: 60.633

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  20 in total

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Journal:  ISME J       Date:  2018-06-13       Impact factor: 10.302

Review 2.  N-linked glycosylation in Archaea: a structural, functional, and genetic analysis.

Authors:  Ken F Jarrell; Yan Ding; Benjamin H Meyer; Sonja-Verena Albers; Lina Kaminski; Jerry Eichler
Journal:  Microbiol Mol Biol Rev       Date:  2014-06       Impact factor: 11.056

3.  S-layers: principles and applications.

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Journal:  FEMS Microbiol Rev       Date:  2014-02-24       Impact factor: 16.408

4.  Identification of genes involved in the biosynthesis of the third and fourth sugars of the Methanococcus maripaludis archaellin N-linked tetrasaccharide.

Authors:  Yan Ding; Gareth M Jones; Kaoru Uchida; Shin-Ichi Aizawa; Anna Robotham; Susan M Logan; John Kelly; Ken F Jarrell
Journal:  J Bacteriol       Date:  2013-07-08       Impact factor: 3.490

5.  Abundant Lysine Methylation and N-Terminal Acetylation in Sulfolobus islandicus Revealed by Bottom-Up and Top-Down Proteomics.

Authors:  Egor A Vorontsov; Elena Rensen; David Prangishvili; Mart Krupovic; Julia Chamot-Rooke
Journal:  Mol Cell Proteomics       Date:  2016-08-23       Impact factor: 5.911

Review 6.  Halophilic archaea and their potential to generate renewable fuels and chemicals.

Authors:  Lakshmi Kasirajan; Julie A Maupin-Furlow
Journal:  Biotechnol Bioeng       Date:  2020-12-16       Impact factor: 4.530

7.  Nucleotides Flanking the Start Codon in hsp70 mRNAs with Very Short 5'-UTRs Greatly Affect Gene Expression in Haloarchaea.

Authors:  Wenchao Chen; Guopeng Yang; Yue He; Shaoming Zhang; Haiyan Chen; Ping Shen; Xiangdong Chen; Yu-Ping Huang
Journal:  PLoS One       Date:  2015-09-17       Impact factor: 3.240

Review 8.  Biomimetic interfaces based on S-layer proteins, lipid membranes and functional biomolecules.

Authors:  Bernhard Schuster; Uwe B Sleytr
Journal:  J R Soc Interface       Date:  2014-05-08       Impact factor: 4.118

9.  Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations.

Authors:  Wei Qin; Shady A Amin; Rachel A Lundeen; Katherine R Heal; Willm Martens-Habbena; Serdar Turkarslan; Hidetoshi Urakawa; Kyle C Costa; Erik L Hendrickson; Tony Wang; David Ac Beck; Sonia M Tiquia-Arashiro; Fred Taub; Andrew D Holmes; Neeraja Vajrala; Paul M Berube; Todd M Lowe; James W Moffett; Allan H Devol; Nitin S Baliga; Daniel J Arp; Luis A Sayavedra-Soto; Murray Hackett; E Virginia Armbrust; Anitra E Ingalls; David A Stahl
Journal:  ISME J       Date:  2017-10-20       Impact factor: 11.217

10.  Nitrogen regulation of protein-protein interactions and transcript levels of GlnK PII regulator and AmtB ammonium transporter homologs in Archaea.

Authors:  Laia Pedro-Roig; Christian Lange; María José Bonete; Jörg Soppa; Julie Maupin-Furlow
Journal:  Microbiologyopen       Date:  2013-08-28       Impact factor: 3.139

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