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Literature DB >> 21602336

Complete genome sequence of the haloalkaliphilic, hydrogen-producing bacterium Halanaerobium hydrogeniformans.

Steven D Brown¹, Matthew B Begemann, Melanie R Mormile, Judy D Wall, Cliff S Han, Lynne A Goodwin, Samuel Pitluck, Miriam L Land, Loren J Hauser, Dwayne A Elias.

Abstract

Halanaerobium hydrogenoformans is an alkaliphilic bacterium capable of biohydrogen production at pH 11 and 7% (wt/vol) salt. We present the 2.6-Mb genome sequence to provide insights into its physiology and potential for bioenergy applications.

Entities: Chemical Species

Mesh：

Substances：
Alkalies
Hydrogen

Year: 2011 PMID： 21602336 PMCID： PMC3133330 DOI： 10.1128/JB.05209-11

Source DB: PubMed Journal: J Bacteriol ISSN： 0021-9193 Impact factor: 3.490

9 in total

1. Solexa Ltd.

Authors: Simon Bennett
Journal: Pharmacogenomics Date: 2004-06 Impact factor: 2.533

2. Sulfur-oxidizing bacteria in Soap Lake (Washington State), a meromictic, haloalkaline lake with an unprecedented high sulfide content.

Authors: Dimitry Y Sorokin; Mirjam Foti; Holly C Pinkart; Gerard Muyzer
Journal: Appl Environ Microbiol Date: 2006-11-17 Impact factor: 4.792

3. Genome sequencing in microfabricated high-density picolitre reactors.

Authors: Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal: Nature Date: 2005-07-31 Impact factor: 49.962

4. Characterization of the prokaryotic diversity in cold saline perennial springs of the Canadian high Arctic.

Authors: Nancy N Perreault; Dale T Andersen; Wayne H Pollard; Charles W Greer; Lyle G Whyte
Journal: Appl Environ Microbiol Date: 2007-01-12 Impact factor: 4.792

5. Spatial and temporal patterns in the microbial diversity of a meromictic soda lake in Washington State.

Authors: Pedro A Dimitriu; Holly C Pinkart; Brent M Peyton; Melanie R Mormile
Journal: Appl Environ Microbiol Date: 2008-06-13 Impact factor: 4.792

6. Genomics. Genome project standards in a new era of sequencing.

Authors: P S G Chain; D V Grafham; R S Fulton; M G Fitzgerald; J Hostetler; D Muzny; J Ali; B Birren; D C Bruce; C Buhay; J R Cole; Y Ding; S Dugan; D Field; G M Garrity; R Gibbs; T Graves; C S Han; S H Harrison; S Highlander; P Hugenholtz; H M Khouri; C D Kodira; E Kolker; N C Kyrpides; D Lang; A Lapidus; S A Malfatti; V Markowitz; T Metha; K E Nelson; J Parkhill; S Pitluck; X Qin; T D Read; J Schmutz; S Sozhamannan; P Sterk; R L Strausberg; G Sutton; N R Thomson; J M Tiedje; G Weinstock; A Wollam; J C Detter
Journal: Science Date: 2009-10-09 Impact factor: 47.728

7. Halomonas campisalis sp. nov., a denitrifying, moderately haloalkaliphilic bacterium.

Authors: M R Mormile; M F Romine; M T Garcia; A Ventosa; T J Bailey; B M Peyton
Journal: Syst Appl Microbiol Date: 1999-12 Impact factor: 4.022

8. Microbial diversity of the brine-seawater interface of the Kebrit Deep, Red Sea, studied via 16S rRNA gene sequences and cultivation methods.

Authors: W Eder; L L Jahnke; M Schmidt; R Huber
Journal: Appl Environ Microbiol Date: 2001-07 Impact factor: 4.792

9. Complete genome sequence of the cellulolytic thermophile Caldicellulosiruptor obsidiansis OB47T.

Authors: James G Elkins; Adriane Lochner; Scott D Hamilton-Brehm; Karen Walston Davenport; Mircea Podar; Steven D Brown; Miriam L Land; Loren J Hauser; Dawn M Klingeman; Babu Raman; Lynne A Goodwin; Roxanne Tapia; Linda J Meincke; J Chris Detter; David C Bruce; Cliff S Han; Anthony V Palumbo; Robert W Cottingham; Martin Keller; David E Graham
Journal: J Bacteriol Date: 2010-09-17 Impact factor: 3.490

9 in total

13 in total

1. The amino acid composition of proteins from anaerobic halophilic bacteria of the order Halanaerobiales.

Authors: Rahel Elevi Bardavid; Aharon Oren
Journal: Extremophiles Date: 2012-04-19 Impact factor: 2.395

2. Predominance and Metabolic Potential of Halanaerobium spp. in Produced Water from Hydraulically Fractured Marcellus Shale Wells.

Authors: Daniel Lipus; Amit Vikram; Daniel Ross; Daniel Bain; Djuna Gulliver; Richard Hammack; Kyle Bibby
Journal: Appl Environ Microbiol Date: 2017-03-31 Impact factor: 4.792

3. A Streamlined Strategy for Biohydrogen Production with Halanaerobium hydrogeniformans, an Alkaliphilic Bacterium.

Authors: Matthew B Begemann; Melanie R Mormile; Oliver C Sitton; Judy D Wall; Dwayne A Elias
Journal: Front Microbiol Date: 2012-03-21 Impact factor: 5.640

4. pGIAK1, a heavy metal resistant plasmid from an obligate alkaliphilic and halotolerant bacterium isolated from the Antarctic Concordia station confined environment.

Authors: Suxia Guo; Jacques Mahillon
Journal: PLoS One Date: 2013-08-29 Impact factor: 3.240

5. Complete genome sequence of Halorhodospira halophila SL1.

Authors: Jean F Challacombe; Sophia Majid; Ratnakar Deole; Thomas S Brettin; David Bruce; Susana F Delano; John C Detter; Cheryl D Gleasner; Cliff S Han; Monica Misra; Krista G Reitenga; Natalia Mikhailova; Tanja Woyke; Sam Pitluck; Matt Nolan; Miriam L Land; Elizabeth Saunders; Roxanne Tapia; Alla Lapidus; Natalia Ivanova; Wouter D Hoff
Journal: Stand Genomic Sci Date: 2013-04-15

6. Comparative analysis of amino acid sequences from mesophiles and thermophiles in respective of carbon-nitrogen hydrolase family.

Authors: Sarita Devi; Nikhil Sharma; Tek Chand Bhalla
Journal: 3 Biotech Date: 2013-01-16 Impact factor: 2.406

7. Genome Sequence of Halanaerobium saccharolyticum subsp. saccharolyticum Strain DSM 6643T, a Halophilic Hydrogen-Producing Bacterium.

Authors: Anniina Kivistö; Antti Larjo; Alessandro Ciranna; Ville Santala; Christophe Roos; Matti Karp
Journal: Genome Announc Date: 2013-05-02