Literature DB >> 21602332

Genome sequence of Escherichia coli AA86, isolated from cow feces.

Hana Yi1, Yong-Joon Cho, Hor-Gil Hur, Jongsik Chun.   

Abstract

Escherichia coli AA86 (=KACC 15541) is an enteric bacterium that was isolated from a sample of healthy cow feces. Its genome sequence revealed that it is most closely related to the human fecal strain E. coli SE15 and could be classified under E. coli phylogenetic group B2. Here, we report the genome sequence of E. coli AA86, consisting of 3 contigs and 2 plasmids.

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Year:  2011        PMID： 21602332      PMCID： PMC3133322          DOI： 10.1128/JB.05193-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

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2.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

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Review 3.  Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematics.

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Review 4.  A genomic perspective on protein families.

Authors:  R L Tatusov; E V Koonin; D J Lipman
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5.  Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2.

Authors:  Hidehiro Toh; Kenshiro Oshima; Atsushi Toyoda; Yoshitoshi Ogura; Tadasuke Ooka; Hiroyuki Sasamoto; Sang-Hee Park; Sunao Iyoda; Ken Kurokawa; Hidetoshi Morita; Kikuji Itoh; Todd D Taylor; Tetsuya Hayashi; Masahira Hattori
Journal:  J Bacteriol       Date:  2009-12-11       Impact factor: 3.490

6.  The distribution and genetic structure of Escherichia coli in Australian vertebrates: host and geographic effects.

Authors:  David M Gordon; Ann Cowling
Journal:  Microbiology       Date:  2003-12       Impact factor: 2.777

7.  Escherichia coli phylogenetic group determination and its application in the identification of the major animal source of fecal contamination.

Authors:  Camila Carlos; Mathias M Pires; Nancy C Stoppe; Elayse M Hachich; Maria I Z Sato; Tânia A T Gomes; Luiz A Amaral; Laura M M Ottoboni
Journal:  BMC Microbiol       Date:  2010-06-01       Impact factor: 3.605

8.  Accessing the SEED genome databases via Web services API: tools for programmers.

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9.  Genetic diversity and population structure of Escherichia coli isolated from freshwater beaches.

Authors:  Seth T Walk; Elizabeth W Alm; Lisa M Calhoun; Janice M Mladonicky; Thomas S Whittam
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10.  The RAST Server: rapid annotations using subsystems technology.

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Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  10 in total
  5 in total

1.  Draft genome sequence of Staphylococcus saprophyticus subsp. saprophyticus M1-1, isolated from the gills of a Korean rockfish, Sebastes schlegeli Hilgendorf, after high hydrostatic pressure processing.

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Journal:  J Bacteriol       Date:  2012-08       Impact factor: 3.490

2.  Role of homologous recombination in adaptive diversification of extraintestinal Escherichia coli.

Authors:  Sandip Paul; Elena V Linardopoulou; Mariya Billig; Veronika Tchesnokova; Lance B Price; James R Johnson; Sujay Chattopadhyay; Evgeni V Sokurenko
Journal:  J Bacteriol       Date:  2012-11-02       Impact factor: 3.490

3.  Directed evaluation of enterotoxigenic Escherichia coli autotransporter proteins as putative vaccine candidates.

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4.  No evidence for a bovine mastitis Escherichia coli pathotype.

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Journal:  BMC Genomics       Date:  2017-05-08       Impact factor: 3.969

5.  The epidemic of extended-spectrum-β-lactamase-producing Escherichia coli ST131 is driven by a single highly pathogenic subclone, H30-Rx.

Authors:  Lance B Price; James R Johnson; Maliha Aziz; Connie Clabots; Brian Johnston; Veronika Tchesnokova; Lora Nordstrom; Maria Billig; Sujay Chattopadhyay; Marc Stegger; Paal S Andersen; Talima Pearson; Kim Riddell; Peggy Rogers; Delia Scholes; Barbara Kahl; Paul Keim; Evgeni V Sokurenko
Journal:  mBio       Date:  2013-12-17       Impact factor: 7.867
  5 in total

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