Literature DB >> 21596989

Chromatin "prepattern" and histone modifiers in a fate choice for liver and pancreas.

Cheng-Ran Xu1, Philip A Cole, David J Meyers, Jay Kormish, Sharon Dent, Kenneth S Zaret.   

Abstract

Transcriptionally silent genes can be marked by histone modifications and regulatory proteins that indicate the genes' potential to be activated. Such marks have been identified in pluripotent cells, but it is unknown how such marks occur in descendant, multipotent embryonic cells that have restricted cell fate choices. We isolated mouse embryonic endoderm cells and assessed histone modifications at regulatory elements of silent genes that are activated upon liver or pancreas fate choices. We found that the liver and pancreas elements have distinct chromatin patterns. Furthermore, the histone acetyltransferase P300, recruited via bone morphogenetic protein signaling, and the histone methyltransferase Ezh2 have modulatory roles in the fate choice. These studies reveal a functional "prepattern" of chromatin states within multipotent progenitors and potential targets to modulate cell fate induction.

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Year:  2011        PMID: 21596989      PMCID: PMC3128430          DOI: 10.1126/science.1202845

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  37 in total

1.  Distinct but overlapping roles of histone acetylase PCAF and of the closely related PCAF-B/GCN5 in mouse embryogenesis.

Authors:  T Yamauchi; J Yamauchi; T Kuwata; T Tamura; T Yamashita; N Bae; H Westphal; K Ozato; Y Nakatani
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

2.  Hex homeobox gene-dependent tissue positioning is required for organogenesis of the ventral pancreas.

Authors:  Roque Bort; Juan Pedro Martinez-Barbera; Rosa S P Beddington; Kenneth S Zaret
Journal:  Development       Date:  2004-01-21       Impact factor: 6.868

3.  Role of histone H3 lysine 27 methylation in Polycomb-group silencing.

Authors:  Ru Cao; Liangjun Wang; Hengbin Wang; Li Xia; Hediye Erdjument-Bromage; Paul Tempst; Richard S Jones; Yi Zhang
Journal:  Science       Date:  2002-09-26       Impact factor: 47.728

4.  Differential requirements for Smad4 in TGFbeta-dependent patterning of the early mouse embryo.

Authors:  Gerald C Chu; N Ray Dunn; Dorian C Anderson; Leif Oxburgh; Elizabeth J Robertson
Journal:  Development       Date:  2004-06-23       Impact factor: 6.868

5.  Multiple hepatocyte-enriched nuclear factors function in the regulation of transthyretin and alpha 1-antitrypsin genes.

Authors:  R H Costa; D R Grayson; J E Darnell
Journal:  Mol Cell Biol       Date:  1989-04       Impact factor: 4.272

6.  SEK1/MKK4-mediated SAPK/JNK signaling participates in embryonic hepatoblast proliferation via a pathway different from NF-kappaB-induced anti-apoptosis.

Authors:  Tomomi Watanabe; Kentaro Nakagawa; Shinya Ohata; Daiju Kitagawa; Gen Nishitai; Jungwon Seo; Shuhei Tanemura; Nao Shimizu; Hiroyuki Kishimoto; Teiji Wada; Junken Aoki; Hiroyuki Arai; Takeshi Iwatsubo; Miyuki Mochita; Toshio Watanabe; Masanobu Satake; Yoshiaki Ito; Toshifumi Matsuyama; Tak W Mak; Josef M Penninger; Hiroshi Nishina; Toshiaki Katada
Journal:  Dev Biol       Date:  2002-10-15       Impact factor: 3.582

7.  Ezh2 controls B cell development through histone H3 methylation and Igh rearrangement.

Authors:  I-Hsin Su; Ashwin Basavaraj; Andrew N Krutchinsky; Oliver Hobert; Axel Ullrich; Brian T Chait; Alexander Tarakhovsky
Journal:  Nat Immunol       Date:  2002-12-23       Impact factor: 25.606

8.  Tissue-specific in vitro transcription from the mouse albumin promoter.

Authors:  K Gorski; M Carneiro; U Schibler
Journal:  Cell       Date:  1986-12-05       Impact factor: 41.582

9.  Conserved transcriptional regulatory domains of the pdx-1 gene.

Authors:  Kevin Gerrish; Jennifer C Van Velkinburgh; Roland Stein
Journal:  Mol Endocrinol       Date:  2003-12-30

10.  A bipotential precursor population for pancreas and liver within the embryonic endoderm.

Authors:  G Deutsch; J Jung; M Zheng; J Lóra; K S Zaret
Journal:  Development       Date:  2001-03       Impact factor: 6.868

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  98 in total

1.  Cell type-specific chromatin immunoprecipitation from multicellular complex samples using BiTS-ChIP.

Authors:  Stefan Bonn; Robert P Zinzen; Alexis Perez-Gonzalez; Andrew Riddell; Anne-Claude Gavin; Eileen E M Furlong
Journal:  Nat Protoc       Date:  2012-04-26       Impact factor: 13.491

Review 2.  Enhancers: emerging roles in cell fate specification.

Authors:  Chin-Tong Ong; Victor G Corces
Journal:  EMBO Rep       Date:  2012-04-10       Impact factor: 8.807

3.  Genome-wide survey reveals predisposing diabetes type 2-related DNA methylation variations in human peripheral blood.

Authors:  Gidon Toperoff; Dvir Aran; Jeremy D Kark; Michael Rosenberg; Tatyana Dubnikov; Batel Nissan; Julio Wainstein; Yechiel Friedlander; Ephrat Levy-Lahad; Benjamin Glaser; Asaf Hellman
Journal:  Hum Mol Genet       Date:  2011-10-12       Impact factor: 6.150

Review 4.  Lineage determinants in early endocrine development.

Authors:  Sebastian Rieck; Eric D Bankaitis; Christopher V E Wright
Journal:  Semin Cell Dev Biol       Date:  2012-06-21       Impact factor: 7.727

Review 5.  Epigenetic regulation of pancreas development and function.

Authors:  Dana Avrahami; Klaus H Kaestner
Journal:  Semin Cell Dev Biol       Date:  2012-06-21       Impact factor: 7.727

6.  Homeoprotein hhex-induced conversion of intestinal to ventral pancreatic precursors results in the formation of giant pancreata in Xenopus embryos.

Authors:  Hui Zhao; Dandan Han; Igor B Dawid; Tomas Pieler; Yonglong Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-16       Impact factor: 11.205

Review 7.  Deconstructing pancreas developmental biology.

Authors:  Cecil M Benitez; William R Goodyer; Seung K Kim
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-06-01       Impact factor: 10.005

8.  Catalytic mechanism of histone acetyltransferase p300: from the proton transfer to acetylation reaction.

Authors:  Xinlei Zhang; Sisheng Ouyang; Xiangqian Kong; Zhongjie Liang; Junyan Lu; Kongkai Zhu; Dan Zhao; Mingyue Zheng; Hualiang Jiang; Xin Liu; Ronen Marmorstein; Cheng Luo
Journal:  J Phys Chem B       Date:  2014-02-19       Impact factor: 2.991

9.  A Chromatin Basis for Cell Lineage and Disease Risk in the Human Pancreas.

Authors:  H Efsun Arda; Jennifer Tsai; Yenny R Rosli; Paul Giresi; Rita Bottino; William J Greenleaf; Howard Y Chang; Seung K Kim
Journal:  Cell Syst       Date:  2018-08-22       Impact factor: 10.304

Review 10.  Epigenetics mechanisms in renal development.

Authors:  Sylvia A Hilliard; Samir S El-Dahr
Journal:  Pediatr Nephrol       Date:  2015-10-22       Impact factor: 3.714

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