Literature DB >> 21589411

(1R,3S)-Methyl 6,7-dimeth-oxy-1-(4-meth-oxy-phen-yl)-1,2,3,4-tetra-hydro-isoquinoline-3-carboxyl-ate.

Tricia Naicker, Thavendran Govender, Hendrik G Kruger, Glenn E M Maguire.   

Abstract

The title compound, C(20)H(23)NO(5), is the third in a series of tetra-hydoisoquinoline (TIQ) compounds that are precursors to novel chiral catalysts. The N-containing six-membered ring assumes a half-boat conformation. No hydrogen bonding is observed in the crystal structure.

Entities:  

Year:  2010        PMID: 21589411      PMCID: PMC3011791          DOI: 10.1107/S1600536810044909

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Naicker et al. (2009 ▶, 2010 ▶); Alberach et al. (2004 ▶). For the synthesis of the title compound, see: Aubry et al. (2006 ▶).

Experimental

Crystal data

C20H23NO5 M = 357.39 Orthorhombic, a = 5.3719 (7) Å b = 12.1726 (14) Å c = 27.021 (3) Å V = 1766.9 (4) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 173 K 0.20 × 0.12 × 0.12 mm

Data collection

Bruker Kappa DUO APEXII diffractometer 13619 measured reflections 2878 independent reflections 2538 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.090 S = 1.04 2878 reflections 239 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.26 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810044909/hg2711sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810044909/hg2711Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H23NO5F(000) = 760
Mr = 357.39Dx = 1.344 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 13619 reflections
a = 5.3719 (7) Åθ = 2.3–29.6°
b = 12.1726 (14) ŵ = 0.10 mm1
c = 27.021 (3) ÅT = 173 K
V = 1766.9 (4) Å3Needle, colourless
Z = 40.20 × 0.12 × 0.12 mm
Bruker Kappa DUO APEXII diffractometer2538 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.032
graphiteθmax = 29.6°, θmin = 2.3°
0.5° φ scans and ω scansh = −7→7
13619 measured reflectionsk = −16→16
2878 independent reflectionsl = −26→37
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0435P)2 + 0.3587P] where P = (Fo2 + 2Fc2)/3
2878 reflections(Δ/σ)max = 0.001
239 parametersΔρmax = 0.26 e Å3
1 restraintΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3734 (3)0.44954 (13)0.76583 (6)0.0498 (4)
H1A0.2473 (3)0.28121 (11)0.78678 (5)0.0378 (3)
H1B0.4011 (3)0.34146 (11)1.09674 (5)0.0307 (3)
C20.3315 (3)0.91415 (10)0.85890 (5)0.0351 (3)
H20.6521 (3)0.82927 (10)0.91879 (5)0.0334 (3)
C40.0808 (3)0.40422 (12)0.87542 (5)0.0253 (3)
H40.078 (4)0.3258 (5)0.8806 (7)0.031 (5)*
C5−0.0280 (3)0.55050 (15)0.81826 (7)0.0269 (4)
C6−0.01840.57130.78290.032*
H6−0.19970.56520.82980.032*
C70.0265 (3)0.42813 (14)0.82338 (6)0.0264 (4)
C8−0.12790.38710.81410.032*
C90.3147 (3)0.45361 (13)0.89317 (6)0.0224 (3)
H90.45740.41900.87520.027*
C100.3126 (3)0.57639 (13)0.88213 (6)0.0211 (3)
C110.4841 (3)0.64470 (14)0.90671 (6)0.0229 (3)
C120.59670.61360.92990.027*
H12A0.4912 (3)0.75648 (14)0.89759 (6)0.0242 (3)
H12B0.3187 (4)0.80245 (13)0.86413 (6)0.0250 (3)
H12C0.1543 (3)0.73469 (14)0.83937 (6)0.0253 (3)
C130.04070.76570.81640.030*
C140.1519 (3)0.62062 (14)0.84759 (6)0.0231 (3)
H140.2348 (4)0.39131 (15)0.78851 (6)0.0276 (4)
C150.4358 (4)0.23681 (18)0.75419 (8)0.0383 (5)
H150.43040.15640.75530.057*
C160.60030.26230.76490.057*
C170.40440.26170.72030.057*
H170.3392 (3)0.42874 (12)0.94812 (6)0.0216 (3)
C180.5433 (3)0.37117 (13)0.96620 (6)0.0239 (3)
H180.67270.35010.94420.029*
C190.5606 (3)0.34403 (14)1.01604 (7)0.0256 (3)
H19A0.70070.30451.02800.031*
H19B0.3716 (3)0.37499 (13)1.04827 (6)0.0238 (3)
H19C0.1682 (3)0.43478 (13)1.03116 (6)0.0250 (3)
C200.04060.45741.05330.030*
H20A0.1551 (3)0.46090 (13)0.98113 (6)0.0245 (3)
H20B0.01670.50170.96920.029*
H20C0.1949 (4)0.35863 (18)1.12932 (7)0.0399 (5)
C210.23740.33191.16250.060*
H21A0.04960.31851.11690.060*
H21B0.15640.43721.13090.060*
H21C0.8323 (4)0.78695 (16)0.95244 (7)0.0317 (4)
N10.93530.84730.96500.047*
H1N0.93800.73350.93530.047*
O10.74740.75100.98020.047*
O20.1569 (4)0.96322 (17)0.82600 (8)0.0419 (5)
O30.18351.04290.82520.063*
O4−0.01250.94770.83750.063*
O50.17970.93290.79270.063*
U11U22U33U12U13U23
C10.0537 (10)0.0375 (8)0.0581 (10)−0.0089 (8)0.0274 (9)−0.0036 (7)
H1A0.0463 (8)0.0301 (7)0.0370 (7)−0.0025 (6)0.0121 (7)−0.0065 (6)
H1B0.0360 (7)0.0309 (6)0.0252 (6)0.0054 (6)0.0012 (5)0.0018 (5)
C20.0433 (8)0.0212 (6)0.0409 (8)−0.0014 (6)−0.0095 (7)0.0042 (5)
H20.0349 (7)0.0253 (6)0.0399 (7)−0.0042 (6)−0.0127 (6)−0.0019 (5)
C40.0265 (7)0.0241 (7)0.0253 (7)−0.0065 (6)0.0018 (6)−0.0012 (6)
C50.0242 (8)0.0296 (8)0.0269 (8)−0.0021 (7)−0.0041 (7)−0.0024 (7)
C70.0256 (8)0.0276 (8)0.0261 (8)−0.0063 (7)0.0012 (7)−0.0034 (7)
C90.0226 (7)0.0205 (7)0.0242 (7)−0.0020 (6)0.0033 (6)−0.0014 (6)
C100.0214 (7)0.0201 (7)0.0218 (7)−0.0015 (6)0.0032 (6)−0.0004 (6)
C110.0221 (7)0.0237 (7)0.0229 (7)0.0002 (6)−0.0005 (6)0.0009 (6)
H12A0.0246 (8)0.0236 (7)0.0246 (8)−0.0022 (7)−0.0007 (7)−0.0023 (6)
H12B0.0292 (8)0.0207 (7)0.0252 (8)−0.0003 (7)0.0020 (7)0.0014 (6)
H12C0.0256 (8)0.0268 (8)0.0235 (8)0.0008 (7)−0.0023 (7)0.0023 (6)
C140.0229 (7)0.0254 (7)0.0211 (7)−0.0019 (7)0.0015 (7)−0.0027 (6)
H140.0302 (9)0.0302 (9)0.0223 (8)−0.0047 (7)−0.0004 (7)−0.0057 (7)
C150.0400 (11)0.0407 (11)0.0342 (10)0.0036 (9)0.0033 (9)−0.0115 (9)
H170.0226 (7)0.0175 (7)0.0248 (8)−0.0022 (6)0.0006 (7)−0.0006 (6)
C180.0198 (7)0.0214 (7)0.0304 (8)0.0000 (6)0.0042 (7)−0.0027 (6)
C190.0214 (7)0.0225 (7)0.0329 (9)0.0021 (6)−0.0017 (7)0.0004 (7)
H19B0.0281 (8)0.0185 (7)0.0247 (8)−0.0027 (6)−0.0004 (7)−0.0006 (6)
H19C0.0252 (7)0.0220 (7)0.0278 (8)0.0027 (7)0.0041 (7)−0.0028 (6)
H20A0.0235 (7)0.0211 (7)0.0289 (8)0.0036 (7)0.0012 (7)0.0006 (6)
H20C0.0469 (12)0.0432 (11)0.0296 (9)0.0033 (10)0.0082 (9)0.0042 (8)
H21C0.0302 (9)0.0348 (9)0.0300 (9)−0.0043 (8)−0.0062 (8)−0.0030 (7)
O20.0488 (12)0.0272 (9)0.0498 (12)0.0069 (10)−0.0084 (11)0.0058 (8)
C1—H141.197 (2)H12B—H12C1.381 (2)
H1A—H141.343 (2)H12C—C130.9500
H1A—C151.446 (2)H12C—C141.406 (2)
H1B—H19B1.381 (2)C15—H150.9800
H1B—H20C1.430 (2)C15—C160.9800
C2—H12B1.369 (2)C15—C170.9800
C2—O21.424 (2)H17—C181.390 (2)
H2—H12A1.364 (2)H17—H20A1.388 (2)
H2—H21C1.425 (2)C18—H180.9500
C4—H40.965 (5)C18—C191.390 (2)
C4—C71.465 (2)C19—H19A0.9500
C4—C91.473 (2)C19—H19B1.390 (2)
C5—C60.9900H19B—H19C1.392 (2)
C5—H60.9900H19C—C200.9500
C5—C71.524 (3)H19C—H20A1.391 (2)
C5—C141.514 (2)H20A—H20B0.9500
C7—C81.0000H20C—C210.9800
C7—H141.530 (3)H20C—H21A0.9800
C9—H91.0000H20C—H21B0.9800
C9—C101.524 (2)H21C—N10.9800
C9—H171.521 (2)H21C—H1N0.9800
C10—C111.407 (2)H21C—O10.9800
C10—C141.381 (2)O2—O30.9800
C11—C120.9500O2—O40.9800
C11—H12A1.383 (2)O2—O50.9800
H12A—H12B1.410 (2)
C1—H14—H1A122.83 (18)H12B—C2—O2116.62 (16)
C1—H14—C7126.64 (17)H12B—H12C—C13119.4
H1A—H14—C7110.53 (15)H12B—H12C—C14121.27 (16)
H1A—C15—H15109.5H12C—H12B—H12A119.57 (15)
H1A—C15—C16109.5H12C—C14—C5118.69 (16)
H1A—C15—C17109.5C14—C5—C6109.1
H1B—H19B—C19115.50 (16)C14—C5—H6109.1
H1B—H19B—H19C124.03 (16)C14—C5—C7112.38 (15)
H1B—H20C—C21109.5C14—C10—C9121.29 (15)
H1B—H20C—H21A109.5C14—C10—C11119.86 (15)
H1B—H20C—H21B109.5C14—H12C—C13119.4
C2—H12B—H12A115.30 (16)H14—H1A—C15115.43 (16)
C2—H12B—H12C125.13 (16)H14—C7—C8107.8
C2—O2—O3109.5H15—C15—C16109.5
C2—O2—O4109.5H15—C15—C17109.5
C2—O2—O5109.5C16—C15—C17109.5
H2—H12A—C11125.56 (16)H17—C9—H9108.9
H2—H12A—H12B115.32 (15)H17—C9—C10112.76 (13)
H2—H21C—N1109.5H17—C18—H18119.6
H2—H21C—H1N109.5H17—H20A—H19C121.60 (16)
H2—H21C—O1109.5H17—H20A—H20B119.2
C4—C7—C5108.63 (14)C18—H17—C9120.77 (15)
C4—C7—C8107.8C18—C19—H19A120.2
C4—C7—H14112.79 (15)C19—C18—H17120.87 (16)
C4—C9—H9108.9C19—C18—H18119.6
C4—C9—C10109.28 (14)C19—H19B—H19C120.46 (16)
C4—C9—H17108.07 (13)H19B—H1B—H20C116.85 (15)
C5—C7—C8107.8H19B—C19—C18119.62 (16)
C5—C7—H14111.78 (15)H19B—C19—H19A120.2
C6—C5—H6107.9H19B—H19C—C20120.6
C7—C4—H4109.5 (12)H19C—H20A—H20B119.2
C7—C4—C9113.65 (13)H20A—H17—C9120.63 (15)
C7—C5—C6109.1H20A—H17—C18118.58 (15)
C7—C5—H6109.1H20A—H19C—H19B118.84 (16)
C9—C4—H4111.7 (13)H20A—H19C—C20120.6
C10—C9—H9108.9C21—H20C—H21A109.5
C10—C11—C12119.5C21—H20C—H21B109.5
C10—C14—C5122.23 (15)H21A—H20C—H21B109.5
C10—C14—H12C119.08 (16)N1—H21C—H1N109.5
C11—C10—C9118.82 (15)N1—H21C—O1109.5
C11—H12A—H12B119.11 (16)H1N—H21C—O1109.5
H12A—H2—H21C117.63 (14)O3—O2—O4109.5
H12A—C11—C10121.00 (16)O3—O2—O5109.5
H12A—C11—C12119.5O4—O2—O5109.5
H1B—H19B—H19C—H20A−177.95 (16)C11—C10—C14—C5177.06 (15)
C2—H12B—H12C—C14−179.09 (17)C11—C10—C14—H12C−3.2 (2)
H2—H12A—H12B—C2−2.1 (2)C11—H12A—H12B—C2177.27 (16)
H2—H12A—H12B—H12C177.55 (16)C11—H12A—H12B—H12C−3.1 (3)
C4—C7—H14—C1−110.1 (2)H12A—H12B—H12C—C141.3 (3)
C4—C7—H14—H1A68.92 (19)H12B—H12C—C14—C5−178.36 (16)
C4—C9—C10—C11163.71 (14)H12B—H12C—C14—C101.9 (3)
C4—C9—C10—C14−18.3 (2)C14—C5—C7—C443.2 (2)
C4—C9—H17—C18121.18 (16)C14—C5—C7—H14−81.93 (18)
C4—C9—H17—H20A−57.33 (19)C14—C10—C11—H12A1.4 (2)
C5—C7—H14—C112.7 (3)C15—H1A—H14—C1−1.9 (3)
C5—C7—H14—H1A−168.34 (16)C15—H1A—H14—C7179.03 (15)
C7—C4—C9—C1053.33 (17)H17—C9—C10—C1143.5 (2)
C7—C4—C9—H17176.36 (14)H17—C9—C10—C14−138.55 (16)
C7—C5—C14—C10−11.8 (2)H17—C18—C19—H19B−0.1 (3)
C7—C5—C14—H12C168.42 (16)C18—H17—H20A—H19C−1.4 (2)
C9—C4—C7—C5−67.42 (18)C18—C19—H19B—H1B178.05 (15)
C9—C4—C7—H1457.07 (19)C18—C19—H19B—H19C−1.3 (2)
C9—C10—C11—H12A179.36 (15)C19—H19B—H19C—H20A1.3 (2)
C9—C10—C14—C5−0.9 (2)H19B—H19C—H20A—H170.0 (3)
C9—C10—C14—H12C178.92 (15)H20A—H17—C18—C191.5 (2)
C9—H17—C18—C19−177.06 (15)H20C—H1B—H19B—C19−171.63 (16)
C9—H17—H20A—H19C177.10 (15)H20C—H1B—H19B—H19C7.7 (2)
C10—C9—H17—C18−117.93 (17)H21C—H2—H12A—C111.4 (3)
C10—C9—H17—H20A63.6 (2)H21C—H2—H12A—H12B−179.25 (15)
C10—C11—H12A—H2−178.92 (16)O2—C2—H12B—H12A−178.97 (16)
C10—C11—H12A—H12B1.8 (3)O2—C2—H12B—H12C1.4 (3)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  {(1R,3S)-2-Benzyl-6,7-dimeth-oxy-1-phenyl-1,2,3,4-tetra-hydro-isoquinolin-3-yl}diphenyl-methanol.

Authors:  Tricia Naicker; Thavendran Govender; Hendrik G Kruger; Glenn E M Maguire
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-17

3.  (1R,3S)-Methyl 2-benzyl-6,7-dimeth-oxy-1-phenyl-1,2,3,4-tetra-hydro-isoquinoline-3-carboxyl-ate.

Authors:  Tricia Naicker; Michael McKay; Thavendran Govender; Hendrik G Kruger; Glenn E M Maguire
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-28
  3 in total
  2 in total

1.  [(1R,3S)-6,7-Dimeth-oxy-1-phenyl-1,2,3,4-tetra-hydro-isoquinolin-3-yl]methanol 2.33-hydrate.

Authors:  Sai Kumar Chakka; Michael G McKay; Thavendran Govender; Hendrik G Kruger; Glenn E M Maguire
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-23

2.  (3S)-2-Benzyl-3-carb-oxy-1,2,3,4-tetra-hydro-isoquinolinium chloride monohydrate.

Authors:  Tricia Naicker; Thavendran Govender; Hendrik G Kruger; Glenn E M Maguire
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-24
  2 in total

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