Literature DB >> 21589095

5-Chloro-2-hy-droxy-benzoic acid.

Abdul Rauf Raza, Bushra Nisar, M Nawaz Tahir, Ahmad Raza.   

Abstract

The asymmetric unit of the title compound, C(7)H(5)ClO(3), contains two mol-ecules; both feature an intra-molecular O-H⋯O hydrogen bond, which generates an S(6) ring. In the crystal, both mol-ecules form inversion dimers linked by pairs of O-H⋯O hydrogen bonds with R(2) (2)(8) ring motifs. The dimers are inter-linked by C-H⋯O inter-actions.

Entities:  

Year:  2010        PMID: 21589095      PMCID: PMC3008994          DOI: 10.1107/S1600536810042042

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological background, see: Bright et al. (2010 ▶): Fattorusso et al. (2005 ▶); Miki et al. (2002 ▶). For a related structure, see: Raza et al. (2010 ▶). For graph-set notation, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C7H5ClO3 M = 172.56 Monoclinic, a = 23.526 (2) Å b = 3.7972 (4) Å c = 16.7321 (16) Å β = 104.852 (5)° V = 1444.8 (2) Å3 Z = 8 Mo Kα radiation μ = 0.48 mm−1 T = 296 K 0.34 × 0.12 × 0.10 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.879, T max = 0.888 14048 measured reflections 3697 independent reflections 2444 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.138 S = 1.03 3697 reflections 211 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.38 e Å−3 Δρmin = −0.50 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810042042/hb5691sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810042042/hb5691Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H5ClO3F(000) = 704
Mr = 172.56Dx = 1.587 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 931 reflections
a = 23.526 (2) Åθ = 2.8–26.0°
b = 3.7972 (4) ŵ = 0.48 mm1
c = 16.7321 (16) ÅT = 296 K
β = 104.852 (5)°Needle, light yellow
V = 1444.8 (2) Å30.34 × 0.12 × 0.10 mm
Z = 8
Bruker Kappa APEXII CCD diffractometer3697 independent reflections
Radiation source: fine-focus sealed tube2444 reflections with I > 2σ(I)
graphiteRint = 0.047
Detector resolution: 7.40 pixels mm-1θmax = 28.7°, θmin = 3.6°
ω scansh = −31→31
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −4→5
Tmin = 0.879, Tmax = 0.888l = −22→22
14048 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.138H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.073P)2] where P = (Fo2 + 2Fc2)/3
3697 reflections(Δ/σ)max < 0.001
211 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.50 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.37512 (3)0.69966 (16)0.07736 (3)0.0501 (2)
O10.49060 (7)0.6286 (5)0.38781 (10)0.0531 (6)
O20.43512 (7)0.3536 (5)0.45885 (9)0.0497 (5)
O30.32656 (7)0.1864 (5)0.38353 (10)0.0504 (6)
C10.44188 (9)0.4711 (6)0.39317 (12)0.0372 (6)
C20.39581 (8)0.4495 (5)0.31555 (11)0.0325 (6)
C30.34043 (9)0.3106 (5)0.31526 (13)0.0363 (6)
C40.29691 (10)0.3000 (6)0.24180 (14)0.0427 (7)
C50.30768 (9)0.4181 (6)0.16973 (13)0.0425 (7)
C60.36245 (9)0.5504 (5)0.16965 (12)0.0359 (6)
C70.40631 (9)0.5677 (5)0.24125 (12)0.0355 (6)
Cl20.13798 (3)0.73267 (17)0.21674 (4)0.0624 (3)
O40.01191 (7)0.1719 (5)0.39980 (11)0.0604 (6)
O50.06701 (7)0.1273 (5)0.52956 (10)0.0553 (6)
O60.17545 (7)0.3485 (5)0.56545 (10)0.0538 (6)
C80.06128 (9)0.2160 (6)0.45705 (14)0.0402 (7)
C90.10935 (9)0.3749 (5)0.42825 (12)0.0349 (6)
C100.16403 (9)0.4322 (6)0.48436 (13)0.0383 (7)
C110.20911 (9)0.5788 (6)0.45616 (14)0.0447 (7)
C120.20146 (10)0.6683 (6)0.37478 (15)0.0453 (8)
C130.14736 (10)0.6137 (6)0.31970 (13)0.0413 (7)
C140.10148 (9)0.4679 (6)0.34525 (13)0.0397 (7)
H10.5163 (12)0.635 (7)0.4326 (18)0.0636*
H30.3557 (12)0.189 (7)0.4210 (18)0.0604*
H40.259960.211640.241370.0512*
H50.278100.409240.120740.0510*
H70.442970.657610.240650.0425*
H4A−0.0156 (12)0.058 (8)0.4222 (16)0.0725*
H60.1424 (13)0.258 (7)0.5696 (19)0.0646*
H110.245420.617520.493280.0536*
H120.232330.764780.356770.0543*
H140.065360.431380.307500.0476*
U11U22U33U12U13U23
Cl10.0588 (4)0.0597 (4)0.0332 (3)−0.0012 (3)0.0142 (3)0.0039 (2)
O10.0349 (9)0.0858 (13)0.0354 (9)−0.0154 (8)0.0034 (7)0.0057 (8)
O20.0443 (9)0.0749 (11)0.0300 (8)−0.0096 (8)0.0096 (7)0.0028 (7)
O30.0427 (10)0.0719 (11)0.0399 (9)−0.0131 (8)0.0167 (7)0.0048 (8)
C10.0340 (11)0.0433 (12)0.0359 (10)−0.0004 (9)0.0119 (9)−0.0002 (9)
C20.0314 (10)0.0349 (10)0.0318 (10)0.0006 (8)0.0092 (8)−0.0018 (8)
C30.0356 (11)0.0370 (11)0.0395 (11)−0.0004 (9)0.0153 (9)−0.0010 (8)
C40.0324 (11)0.0477 (13)0.0473 (13)−0.0058 (9)0.0091 (10)−0.0004 (9)
C50.0358 (12)0.0474 (13)0.0405 (12)−0.0017 (10)0.0028 (9)−0.0011 (9)
C60.0408 (11)0.0353 (10)0.0319 (10)0.0017 (9)0.0098 (9)−0.0008 (8)
C70.0331 (11)0.0386 (11)0.0358 (10)−0.0009 (9)0.0109 (8)−0.0028 (8)
Cl20.0825 (5)0.0671 (5)0.0442 (3)−0.0108 (3)0.0284 (3)0.0069 (3)
O40.0345 (9)0.0962 (14)0.0511 (10)−0.0143 (9)0.0121 (8)0.0148 (9)
O50.0414 (9)0.0852 (13)0.0429 (9)−0.0100 (8)0.0173 (7)0.0136 (8)
O60.0402 (9)0.0821 (12)0.0387 (9)−0.0076 (9)0.0093 (7)0.0030 (8)
C80.0313 (11)0.0481 (13)0.0447 (12)0.0001 (9)0.0159 (10)0.0023 (9)
C90.0326 (11)0.0374 (11)0.0386 (11)0.0008 (9)0.0163 (9)0.0002 (8)
C100.0357 (11)0.0429 (12)0.0378 (11)0.0017 (9)0.0123 (9)−0.0023 (9)
C110.0317 (11)0.0528 (14)0.0499 (13)−0.0065 (10)0.0113 (10)−0.0034 (10)
C120.0413 (13)0.0420 (12)0.0597 (15)−0.0090 (10)0.0261 (11)−0.0056 (10)
C130.0517 (14)0.0385 (11)0.0400 (11)−0.0019 (10)0.0230 (10)−0.0004 (9)
C140.0374 (11)0.0450 (12)0.0386 (11)−0.0018 (9)0.0130 (9)0.0005 (9)
Cl1—C61.741 (2)C4—C51.370 (3)
Cl2—C131.740 (2)C5—C61.383 (3)
O1—C11.316 (3)C6—C71.368 (3)
O2—C11.234 (3)C4—H40.9300
O3—C31.351 (3)C5—H50.9300
O1—H10.83 (3)C7—H70.9300
O3—H30.80 (3)C8—C91.468 (3)
O4—C81.313 (3)C9—C141.399 (3)
O5—C81.233 (3)C9—C101.402 (3)
O6—C101.352 (3)C10—C111.383 (3)
O4—H4A0.93 (3)C11—C121.370 (3)
O6—H60.87 (3)C12—C131.382 (3)
C1—C21.465 (3)C13—C141.375 (3)
C2—C71.402 (3)C11—H110.9300
C2—C31.404 (3)C12—H120.9300
C3—C41.384 (3)C14—H140.9300
C1—O1—H1113.3 (19)C6—C7—H7120.00
C3—O3—H3108 (2)C2—C7—H7120.00
C8—O4—H4A109.9 (16)O5—C8—C9122.4 (2)
C10—O6—H6103 (2)O4—C8—C9115.14 (19)
O1—C1—C2115.11 (17)O4—C8—O5122.4 (2)
O2—C1—C2122.3 (2)C8—C9—C14120.85 (19)
O1—C1—O2122.58 (19)C8—C9—C10119.74 (18)
C1—C2—C7120.64 (18)C10—C9—C14119.4 (2)
C3—C2—C7119.43 (18)O6—C10—C11117.7 (2)
C1—C2—C3119.93 (17)O6—C10—C9123.2 (2)
C2—C3—C4119.24 (19)C9—C10—C11119.09 (19)
O3—C3—C4117.2 (2)C10—C11—C12121.5 (2)
O3—C3—C2123.58 (19)C11—C12—C13119.3 (2)
C3—C4—C5120.7 (2)Cl2—C13—C12118.86 (18)
C4—C5—C6120.2 (2)Cl2—C13—C14120.14 (17)
Cl1—C6—C7119.94 (17)C12—C13—C14121.0 (2)
C5—C6—C7120.69 (19)C9—C14—C13119.7 (2)
Cl1—C6—C5119.37 (16)C10—C11—H11119.00
C2—C7—C6119.77 (19)C12—C11—H11119.00
C5—C4—H4120.00C11—C12—H12120.00
C3—C4—H4120.00C13—C12—H12120.00
C4—C5—H5120.00C9—C14—H14120.00
C6—C5—H5120.00C13—C14—H14120.00
O1—C1—C2—C3−175.24 (19)O4—C8—C9—C10−179.8 (2)
O1—C1—C2—C74.5 (3)O4—C8—C9—C14−0.2 (3)
O2—C1—C2—C34.0 (3)O5—C8—C9—C10−0.4 (3)
O2—C1—C2—C7−176.3 (2)O5—C8—C9—C14179.1 (2)
C1—C2—C3—O3−1.1 (3)C8—C9—C10—O6−0.1 (3)
C1—C2—C3—C4178.4 (2)C8—C9—C10—C11179.3 (2)
C7—C2—C3—O3179.12 (19)C14—C9—C10—O6−179.7 (2)
C7—C2—C3—C4−1.3 (3)C14—C9—C10—C11−0.2 (3)
C1—C2—C7—C6−178.98 (19)C8—C9—C14—C13−179.5 (2)
C3—C2—C7—C60.8 (3)C10—C9—C14—C130.1 (3)
O3—C3—C4—C5−179.4 (2)O6—C10—C11—C12179.4 (2)
C2—C3—C4—C51.0 (3)C9—C10—C11—C12−0.1 (3)
C3—C4—C5—C6−0.1 (3)C10—C11—C12—C130.5 (3)
C4—C5—C6—Cl1−179.91 (18)C11—C12—C13—Cl2179.34 (18)
C4—C5—C6—C7−0.5 (3)C11—C12—C13—C14−0.7 (3)
Cl1—C6—C7—C2179.56 (15)Cl2—C13—C14—C9−179.65 (17)
C5—C6—C7—C20.2 (3)C12—C13—C14—C90.4 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O2i0.83 (3)1.88 (3)2.710 (2)171 (3)
O3—H3···O20.80 (3)1.92 (3)2.620 (2)146 (3)
O4—H4A···O5ii0.93 (3)1.76 (3)2.694 (2)175 (2)
O6—H6···O50.87 (3)1.80 (3)2.606 (2)154 (3)
C5—H5···O6iii0.932.553.311 (3)139
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O2i0.83 (3)1.88 (3)2.710 (2)171 (3)
O3—H3⋯O20.80 (3)1.92 (3)2.620 (2)146 (3)
O4—H4A⋯O5ii0.93 (3)1.76 (3)2.694 (2)175 (2)
O6—H6⋯O50.87 (3)1.80 (3)2.606 (2)154 (3)
C5—H5⋯O6iii0.932.553.311 (3)139

Symmetry codes: (i) ; (ii) ; (iii) .

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Journal:  J Med Chem       Date:  2005-11-17       Impact factor: 7.446

4.  Novel pyrrolo-1,5-benzoxazepine compounds display significant activity against resistant chronic myeloid leukaemia cells in vitro, in ex vivo patient samples and in vivo.

Authors:  S A Bright; A M McElligott; J W O'Connell; L O'Connor; P Carroll; G Campiani; M W Deininger; E Conneally; M Lawler; D C Williams; D M Zisterer
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5.  2-Methyl-amino-5-nitro-benzoic acid.

Authors:  Abdul Rauf Raza; Syeda Laila Rubab; M Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-29

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
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1.  2-Amino-5-bromo-pyridinium 5-chloro-2-hy-droxy-benzoate.

Authors:  Kaliyaperumal Thanigaimani; Nuridayanti Che Khalib; Suhana Arshad; Ibrahim Abdul Razak
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-03-16

2.  2-Amino-5-methyl-pyridinium 2-hy-droxy-5-chloro-benzoate.

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