Literature DB >> 21579548

2-Methyl-amino-5-nitro-benzoic acid.

Abdul Rauf Raza, Syeda Laila Rubab, M Nawaz Tahir.   

Abstract

The title compound, C(8)H(8)N(2)O(4), is almost planar (r.m.s. deviation = 0.037 Å) and an intra-molecular N-H⋯O hydrogen bond generates an S(6) ring. In the crystal, inversion dimers linked by pairs of O-H⋯O hydrogen bonds generate R(2) (2)(8) loops. Inter-molecular N-H⋯O hydrogen bonds (involving the same H atom that forms the intra-molecular hydrogen bond) link the dimers into infinite sheets lying parallel to (102).

Entities:  

Year:  2010        PMID: 21579548      PMCID: PMC2979349          DOI: 10.1107/S160053681001946X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the medicinal properties of benzodiazepines, see: Blank et al. (2009 ▶); Kamal et al. (2010 ▶). For a related structure, see: Dhaneshwar & Pant (1972 ▶). For graph-set theory, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C8H8N2O4 M = 196.16 Monoclinic, a = 7.2541 (12) Å b = 14.037 (2) Å c = 8.5972 (14) Å β = 103.673 (6)° V = 850.6 (2) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 296 K 0.34 × 0.12 × 0.10 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.979, T max = 0.988 6739 measured reflections 1667 independent reflections 931 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.156 S = 0.95 1667 reflections 129 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681001946X/hb5463sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681001946X/hb5463Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H8N2O4F(000) = 408
Mr = 196.16Dx = 1.532 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 931 reflections
a = 7.2541 (12) Åθ = 2.8–26.0°
b = 14.037 (2) ŵ = 0.13 mm1
c = 8.5972 (14) ÅT = 296 K
β = 103.673 (6)°Needle, colorless
V = 850.6 (2) Å30.34 × 0.12 × 0.10 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer1667 independent reflections
Radiation source: fine-focus sealed tube931 reflections with I > 2σ(I)
graphiteRint = 0.051
Detector resolution: 7.50 pixels mm-1θmax = 26.0°, θmin = 2.8°
ω scansh = −8→8
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −17→12
Tmin = 0.979, Tmax = 0.988l = −10→10
6739 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.156H-atom parameters constrained
S = 0.95w = 1/[σ2(Fo2) + (0.0901P)2] where P = (Fo2 + 2Fc2)/3
1667 reflections(Δ/σ)max < 0.001
129 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.5419 (3)0.38658 (12)0.5049 (2)0.0518 (7)
O20.7127 (3)0.49628 (11)0.4158 (3)0.0573 (8)
O31.2269 (3)0.42409 (14)0.1896 (3)0.0729 (9)
O41.3096 (3)0.27893 (14)0.1606 (3)0.0672 (8)
N10.6259 (3)0.20268 (13)0.4642 (3)0.0468 (8)
N21.2080 (3)0.33798 (16)0.2050 (3)0.0520 (9)
C10.7967 (3)0.33700 (15)0.3914 (3)0.0356 (8)
C20.7635 (3)0.23711 (16)0.4028 (3)0.0380 (8)
C30.8868 (3)0.17368 (17)0.3470 (3)0.0421 (9)
C41.0304 (4)0.20647 (17)0.2851 (3)0.0445 (9)
C51.0588 (3)0.30381 (17)0.2745 (3)0.0412 (9)
C60.9435 (4)0.36766 (16)0.3270 (3)0.0405 (8)
C70.6728 (4)0.40694 (16)0.4424 (3)0.0404 (9)
C80.5800 (4)0.10286 (17)0.4683 (4)0.0530 (11)
H10.559630.242470.504270.0562*
H20.636120.531600.443250.0859*
H30.868640.108330.353120.0505*
H41.109700.163750.249880.0534*
H60.964730.432630.319040.0486*
H8A0.688220.068780.528570.0796*
H8B0.545750.078390.361010.0796*
H8C0.475520.094990.517890.0796*
U11U22U33U12U13U23
O10.0570 (13)0.0296 (10)0.0792 (14)0.0016 (8)0.0367 (11)0.0003 (9)
O20.0657 (13)0.0256 (11)0.0921 (16)0.0005 (9)0.0418 (12)−0.0015 (9)
O30.0793 (16)0.0436 (12)0.1119 (19)−0.0089 (10)0.0550 (14)0.0108 (12)
O40.0582 (13)0.0610 (13)0.0958 (17)0.0082 (10)0.0448 (12)0.0052 (12)
N10.0541 (14)0.0254 (11)0.0716 (16)−0.0034 (10)0.0363 (13)−0.0040 (10)
N20.0497 (15)0.0443 (14)0.0687 (17)0.0010 (12)0.0273 (13)0.0050 (12)
C10.0406 (15)0.0224 (12)0.0464 (16)0.0003 (10)0.0156 (12)−0.0020 (10)
C20.0416 (15)0.0307 (13)0.0447 (15)−0.0026 (11)0.0160 (13)−0.0013 (11)
C30.0464 (16)0.0261 (12)0.0584 (17)0.0005 (11)0.0216 (14)−0.0032 (12)
C40.0461 (16)0.0333 (15)0.0586 (18)0.0050 (12)0.0212 (14)−0.0029 (12)
C50.0414 (15)0.0366 (15)0.0497 (16)−0.0023 (11)0.0190 (13)0.0030 (12)
C60.0438 (15)0.0288 (13)0.0502 (16)−0.0012 (11)0.0137 (13)−0.0003 (11)
C70.0467 (16)0.0264 (14)0.0494 (16)−0.0001 (11)0.0141 (14)−0.0006 (12)
C80.069 (2)0.0257 (14)0.076 (2)−0.0092 (12)0.0404 (16)−0.0070 (13)
O1—C71.230 (4)C1—C61.380 (4)
O2—C71.319 (3)C2—C31.423 (3)
O3—N21.227 (3)C3—C41.357 (4)
O4—N21.228 (3)C4—C51.388 (3)
O2—H20.8200C5—C61.373 (4)
N1—C81.443 (3)C3—H30.9300
N1—C21.326 (3)C4—H40.9300
N2—C51.437 (3)C6—H60.9300
N1—H10.8600C8—H8A0.9600
C1—C71.466 (3)C8—H8B0.9600
C1—C21.430 (3)C8—H8C0.9600
C7—O2—H2109.00N2—C5—C6119.7 (2)
C2—N1—C8124.3 (2)C1—C6—C5121.1 (2)
O3—N2—C5119.2 (2)O1—C7—O2121.4 (2)
O4—N2—C5118.1 (2)O1—C7—C1124.5 (2)
O3—N2—O4122.7 (2)O2—C7—C1114.2 (2)
C2—N1—H1118.00C2—C3—H3119.00
C8—N1—H1118.00C4—C3—H3119.00
C6—C1—C7119.8 (2)C3—C4—H4120.00
C2—C1—C6119.5 (2)C5—C4—H4120.00
C2—C1—C7120.7 (2)C1—C6—H6119.00
N1—C2—C3119.9 (2)C5—C6—H6119.00
N1—C2—C1122.7 (2)N1—C8—H8A109.00
C1—C2—C3117.4 (2)N1—C8—H8B109.00
C2—C3—C4121.5 (2)N1—C8—H8C109.00
C3—C4—C5119.9 (2)H8A—C8—H8B109.00
C4—C5—C6120.6 (2)H8A—C8—H8C110.00
N2—C5—C4119.6 (2)H8B—C8—H8C109.00
C8—N1—C2—C1175.8 (3)C2—C1—C7—O14.1 (4)
C8—N1—C2—C3−5.1 (4)C2—C1—C7—O2−175.9 (2)
O3—N2—C5—C4176.8 (3)C6—C1—C7—O1−178.0 (2)
O3—N2—C5—C6−2.0 (4)C6—C1—C7—O22.0 (4)
O4—N2—C5—C4−1.9 (4)N1—C2—C3—C4−179.3 (2)
O4—N2—C5—C6179.4 (3)C1—C2—C3—C4−0.1 (4)
C6—C1—C2—N1179.6 (2)C2—C3—C4—C5−0.3 (4)
C6—C1—C2—C30.4 (4)C3—C4—C5—N2−178.4 (2)
C7—C1—C2—N1−2.5 (4)C3—C4—C5—C60.4 (4)
C7—C1—C2—C3178.4 (2)N2—C5—C6—C1178.7 (2)
C2—C1—C6—C5−0.4 (4)C4—C5—C6—C10.0 (4)
C7—C1—C6—C5−178.3 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.862.032.694 (3)134
N1—H1···O4i0.862.523.165 (3)133
O2—H2···O1ii0.821.862.679 (3)177
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O10.862.032.694 (3)134
N1—H1⋯O4i0.862.523.165 (3)133
O2—H2⋯O1ii0.821.862.679 (3)177

Symmetry codes: (i) ; (ii) .

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