| Literature DB >> 21589004 |
Hadi D Arman, Trupta Kaulgud, Edward R T Tiekink.
Abstract
The asymmetric unit of the title cocrystal, C(12)H(10)N(4)·2C(7)H(6)O(2), comprises a single mol-ecule of benzoic acid and one half-mol-ecule of 2-pyridine-aldazine situated about a centre of inversion. The carboxyl group is coplanar with the benzene ring to which it is connected [O-C-C-C = -172.47 (12)°] and similarly, the 2-pyridine-aldazine mol-ecule is planar (r.m.s. deviation of the 16 non-H atoms = 0.017 Å). In the crystal, mol-ecules are connected into a non-planar three-mol-ecule aggregate [dihedral angle between the benzene and pyridyl ring connected by the hydrogen bond = 61.30 (7)°] with a twisted Z-shape. Layers of 2-pyridine-aldazine mol-ecules in the ab plane are sandwiched by benzoic acid mol-ecules being connected by O-H⋯N and C-H⋯O inter-actions, the latter involving the carbonyl O atom so that each benzoic acid mol-ecule links three different 2-pyridine-aldazine mol-ecules. Inter-digitated layers stack along the c axis.Entities:
Year: 2010 PMID: 21589004 PMCID: PMC3009141 DOI: 10.1107/S1600536810040651
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H10N4·2C7H6O2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2619 reflections | |
| θ = 2.1–40.2° | |
| µ = 0.09 mm−1 | |
| α = 108.985 (6)° | |
| β = 99.830 (9)° | Block, yellow |
| γ = 97.849 (10)° | 0.40 × 0.29 × 0.12 mm |
| Rigaku AFC12K/SATURN724 diffractometer | 1935 independent reflections |
| Radiation source: fine-focus sealed tube | 1811 reflections with |
| graphite | |
| ω scans | θmax = 25.0°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 2790 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1935 reflections | (Δ/σ)max < 0.001 |
| 158 parameters | Δρmax = 0.20 e Å−3 |
| 1 restraint | Δρmin = −0.23 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.6343 (3) | 0.67141 (10) | 0.18059 (9) | 0.0287 (3) | |
| H1o | 0.584 (5) | 0.692 (2) | 0.2479 (12) | 0.050 (6)* | |
| O2 | 0.7598 (3) | 0.88248 (10) | 0.23009 (9) | 0.0315 (3) | |
| C1 | 0.7523 (3) | 0.77587 (13) | 0.16270 (12) | 0.0235 (3) | |
| C2 | 0.8828 (3) | 0.74881 (14) | 0.05272 (12) | 0.0227 (3) | |
| C3 | 1.0455 (3) | 0.85068 (14) | 0.03269 (13) | 0.0278 (4) | |
| H3 | 1.0702 | 0.9349 | 0.0878 | 0.033* | |
| C4 | 1.1716 (4) | 0.82926 (15) | −0.06766 (14) | 0.0311 (4) | |
| H4 | 1.2846 | 0.8987 | −0.0809 | 0.037* | |
| C5 | 1.1331 (4) | 0.70640 (15) | −0.14890 (13) | 0.0289 (4) | |
| H5 | 1.2192 | 0.6919 | −0.2178 | 0.035* | |
| C6 | 0.9695 (4) | 0.60477 (15) | −0.12974 (13) | 0.0294 (4) | |
| H6 | 0.9428 | 0.5208 | −0.1856 | 0.035* | |
| C7 | 0.8444 (3) | 0.62603 (14) | −0.02863 (13) | 0.0263 (3) | |
| H7 | 0.7326 | 0.5564 | −0.0152 | 0.032* | |
| N1 | 0.4834 (3) | 0.73022 (11) | 0.39929 (10) | 0.0214 (3) | |
| N2 | 0.9261 (3) | 0.54922 (10) | 0.52702 (10) | 0.0211 (3) | |
| C8 | 0.6169 (3) | 0.69350 (12) | 0.48783 (12) | 0.0190 (3) | |
| C9 | 0.6033 (3) | 0.75148 (13) | 0.60760 (12) | 0.0219 (3) | |
| H9 | 0.7002 | 0.7236 | 0.6683 | 0.026* | |
| C10 | 0.4469 (3) | 0.85009 (13) | 0.63643 (12) | 0.0233 (3) | |
| H10 | 0.4365 | 0.8918 | 0.7175 | 0.028* | |
| C11 | 0.3052 (3) | 0.88738 (13) | 0.54546 (13) | 0.0231 (3) | |
| H11 | 0.1932 | 0.9541 | 0.5627 | 0.028* | |
| C12 | 0.3304 (3) | 0.82529 (13) | 0.42883 (13) | 0.0230 (3) | |
| H12 | 0.2344 | 0.8515 | 0.3668 | 0.028* | |
| C13 | 0.7833 (3) | 0.58938 (13) | 0.45006 (12) | 0.0209 (3) | |
| H13 | 0.7846 | 0.5516 | 0.3674 | 0.025* |
| O1 | 0.0405 (6) | 0.0251 (6) | 0.0230 (5) | 0.0084 (5) | 0.0124 (5) | 0.0085 (4) |
| O2 | 0.0457 (7) | 0.0254 (6) | 0.0247 (6) | 0.0126 (5) | 0.0110 (5) | 0.0070 (5) |
| C1 | 0.0261 (7) | 0.0244 (7) | 0.0208 (7) | 0.0084 (6) | 0.0028 (5) | 0.0093 (6) |
| C2 | 0.0231 (7) | 0.0261 (7) | 0.0200 (7) | 0.0083 (6) | 0.0018 (5) | 0.0098 (6) |
| C3 | 0.0333 (8) | 0.0248 (8) | 0.0231 (7) | 0.0064 (6) | 0.0035 (6) | 0.0070 (6) |
| C4 | 0.0336 (8) | 0.0315 (8) | 0.0299 (8) | 0.0025 (7) | 0.0065 (6) | 0.0151 (7) |
| C5 | 0.0302 (8) | 0.0372 (8) | 0.0238 (7) | 0.0118 (6) | 0.0087 (6) | 0.0135 (6) |
| C6 | 0.0349 (8) | 0.0277 (8) | 0.0262 (8) | 0.0103 (6) | 0.0091 (6) | 0.0075 (6) |
| C7 | 0.0314 (8) | 0.0236 (7) | 0.0259 (7) | 0.0084 (6) | 0.0081 (6) | 0.0098 (6) |
| N1 | 0.0212 (6) | 0.0202 (6) | 0.0235 (6) | 0.0037 (5) | 0.0055 (5) | 0.0088 (5) |
| N2 | 0.0200 (6) | 0.0203 (6) | 0.0242 (6) | 0.0063 (5) | 0.0077 (5) | 0.0073 (5) |
| C8 | 0.0165 (6) | 0.0182 (6) | 0.0232 (7) | 0.0018 (5) | 0.0060 (5) | 0.0087 (5) |
| C9 | 0.0205 (7) | 0.0234 (7) | 0.0231 (7) | 0.0037 (5) | 0.0059 (5) | 0.0100 (6) |
| C10 | 0.0251 (7) | 0.0223 (7) | 0.0230 (7) | 0.0036 (6) | 0.0100 (6) | 0.0069 (6) |
| C11 | 0.0214 (7) | 0.0183 (7) | 0.0312 (8) | 0.0052 (5) | 0.0092 (6) | 0.0091 (6) |
| C12 | 0.0220 (7) | 0.0217 (7) | 0.0272 (7) | 0.0050 (5) | 0.0040 (5) | 0.0117 (6) |
| C13 | 0.0194 (6) | 0.0204 (7) | 0.0237 (7) | 0.0036 (5) | 0.0076 (5) | 0.0078 (6) |
| O1—C1 | 1.3292 (18) | N1—C12 | 1.3381 (18) |
| O1—H1o | 0.846 (9) | N1—C8 | 1.3449 (18) |
| O2—C1 | 1.2117 (17) | N2—C13 | 1.2757 (18) |
| C1—C2 | 1.496 (2) | N2—N2i | 1.408 (2) |
| C2—C7 | 1.388 (2) | C8—C9 | 1.3949 (19) |
| C2—C3 | 1.391 (2) | C8—C13 | 1.4698 (18) |
| C3—C4 | 1.384 (2) | C9—C10 | 1.380 (2) |
| C3—H3 | 0.9500 | C9—H9 | 0.9500 |
| C4—C5 | 1.388 (2) | C10—C11 | 1.386 (2) |
| C4—H4 | 0.9500 | C10—H10 | 0.9500 |
| C5—C6 | 1.385 (2) | C11—C12 | 1.385 (2) |
| C5—H5 | 0.9500 | C11—H11 | 0.9500 |
| C6—C7 | 1.390 (2) | C12—H12 | 0.9500 |
| C6—H6 | 0.9500 | C13—H13 | 0.9500 |
| C7—H7 | 0.9500 | ||
| C1—O1—H1o | 109.1 (15) | C6—C7—H7 | 120.0 |
| O2—C1—O1 | 123.44 (13) | C12—N1—C8 | 117.83 (12) |
| O2—C1—C2 | 123.29 (14) | C13—N2—N2i | 111.87 (13) |
| O1—C1—C2 | 113.26 (12) | N1—C8—C9 | 122.45 (12) |
| C7—C2—C3 | 119.91 (13) | N1—C8—C13 | 115.34 (12) |
| C7—C2—C1 | 121.78 (14) | C9—C8—C13 | 122.20 (12) |
| C3—C2—C1 | 118.31 (13) | C10—C9—C8 | 118.85 (13) |
| C4—C3—C2 | 119.96 (14) | C10—C9—H9 | 120.6 |
| C4—C3—H3 | 120.0 | C8—C9—H9 | 120.6 |
| C2—C3—H3 | 120.0 | C9—C10—C11 | 119.04 (12) |
| C3—C4—C5 | 120.05 (14) | C9—C10—H10 | 120.5 |
| C3—C4—H4 | 120.0 | C11—C10—H10 | 120.5 |
| C5—C4—H4 | 120.0 | C10—C11—C12 | 118.57 (12) |
| C6—C5—C4 | 120.19 (14) | C10—C11—H11 | 120.7 |
| C6—C5—H5 | 119.9 | C12—C11—H11 | 120.7 |
| C4—C5—H5 | 119.9 | N1—C12—C11 | 123.25 (13) |
| C5—C6—C7 | 119.84 (14) | N1—C12—H12 | 118.4 |
| C5—C6—H6 | 120.1 | C11—C12—H12 | 118.4 |
| C7—C6—H6 | 120.1 | N2—C13—C8 | 120.75 (12) |
| C2—C7—C6 | 120.06 (14) | N2—C13—H13 | 119.6 |
| C2—C7—H7 | 120.0 | C8—C13—H13 | 119.6 |
| O2—C1—C2—C7 | −173.81 (14) | C12—N1—C8—C9 | −0.65 (19) |
| O1—C1—C2—C7 | 7.72 (19) | C12—N1—C8—C13 | −179.57 (11) |
| O2—C1—C2—C3 | 6.0 (2) | N1—C8—C9—C10 | 0.1 (2) |
| O1—C1—C2—C3 | −172.47 (12) | C13—C8—C9—C10 | 178.93 (12) |
| C7—C2—C3—C4 | −0.7 (2) | C8—C9—C10—C11 | 0.8 (2) |
| C1—C2—C3—C4 | 179.52 (13) | C9—C10—C11—C12 | −1.0 (2) |
| C2—C3—C4—C5 | 0.6 (2) | C8—N1—C12—C11 | 0.4 (2) |
| C3—C4—C5—C6 | −0.2 (2) | C10—C11—C12—N1 | 0.5 (2) |
| C4—C5—C6—C7 | −0.2 (2) | N2i—N2—C13—C8 | −179.13 (12) |
| C3—C2—C7—C6 | 0.3 (2) | N1—C8—C13—N2 | 178.03 (12) |
| C1—C2—C7—C6 | −179.93 (13) | C9—C8—C13—N2 | −0.9 (2) |
| C5—C6—C7—C2 | 0.2 (2) |
| H··· | ||||
| O1—H1o···N1 | 0.85 (2) | 1.88 (2) | 2.7269 (16) | 177 (2) |
| C11—H11···O2ii | 0.95 | 2.54 | 3.1811 (19) | 125 |
| C12—H12···O2iii | 0.95 | 2.59 | 3.4647 (19) | 154 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.85 (2) | 1.88 (2) | 2.7269 (16) | 177 (2) |
| C11—H11⋯O2i | 0.95 | 2.54 | 3.1811 (19) | 125 |
| C12—H12⋯O2ii | 0.95 | 2.59 | 3.4647 (19) | 154 |
Symmetry codes: (i) ; (ii) .