| Literature DB >> 21588732 |
Mardia Aina Aznan Akhmad1, Zanariah Abdullah, Zainal A Fairuz, Seik Weng Ng, Edward R T Tiekink.
Abstract
Two independent mol-ecules comprise the asymmetric unit of the title compound, C(12)H(11)N(3)O(2). These differ in terms of the relative orientations of theEntities:
Year: 2010 PMID: 21588732 PMCID: PMC3008084 DOI: 10.1107/S1600536810033040
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H11N3O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2221 reflections |
| θ = 3.0–27.8° | |
| µ = 0.10 mm−1 | |
| β = 91.310 (2)° | Plate, red |
| 0.35 × 0.35 × 0.05 mm | |
| Bruker SMART APEX diffractometer | 3344 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 1.5° |
| ω scans | |
| 13178 measured reflections | |
| 4804 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4804 reflections | (Δ/σ)max = 0.001 |
| 317 parameters | Δρmax = 0.30 e Å−3 |
| 2 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.5737 (2) | 0.6059 (3) | 0.07334 (8) | 0.0224 (6) | |
| O2 | 0.3802 (2) | 0.6139 (4) | 0.04820 (8) | 0.0265 (6) | |
| O3 | 0.1554 (2) | 0.1650 (4) | −0.07299 (8) | 0.0286 (6) | |
| O4 | −0.0348 (2) | 0.2379 (4) | −0.09457 (8) | 0.0286 (6) | |
| N1 | 0.4595 (3) | 0.5848 (4) | 0.08003 (9) | 0.0186 (6) | |
| N2 | 0.4564 (3) | 0.4326 (4) | 0.20794 (9) | 0.0193 (6) | |
| N3 | 0.6278 (2) | 0.5089 (4) | 0.16220 (9) | 0.0163 (6) | |
| N4 | 0.0469 (3) | 0.2118 (4) | −0.06319 (9) | 0.0207 (6) | |
| N5 | 0.0665 (3) | 0.2476 (4) | 0.06993 (9) | 0.0200 (6) | |
| N6 | 0.2219 (3) | 0.1555 (4) | 0.01848 (9) | 0.0191 (6) | |
| C1 | 0.4176 (3) | 0.5224 (4) | 0.12647 (10) | 0.0171 (7) | |
| C2 | 0.2897 (3) | 0.4973 (5) | 0.13170 (11) | 0.0195 (7) | |
| H2 | 0.2331 | 0.5196 | 0.1056 | 0.023* | |
| C3 | 0.2457 (3) | 0.4396 (5) | 0.17510 (11) | 0.0206 (7) | |
| H3A | 0.1586 | 0.4213 | 0.1798 | 0.025* | |
| C4 | 0.3327 (3) | 0.4092 (5) | 0.21164 (11) | 0.0211 (7) | |
| H4 | 0.3022 | 0.3687 | 0.2416 | 0.025* | |
| C5 | 0.5016 (3) | 0.4879 (4) | 0.16576 (11) | 0.0161 (7) | |
| C6 | 0.7235 (3) | 0.5118 (4) | 0.19792 (11) | 0.0154 (7) | |
| C7 | 0.8350 (3) | 0.5993 (4) | 0.18500 (11) | 0.0169 (7) | |
| H7 | 0.8427 | 0.6476 | 0.1535 | 0.020* | |
| C8 | 0.9339 (3) | 0.6166 (5) | 0.21729 (11) | 0.0185 (7) | |
| H8 | 1.0089 | 0.6759 | 0.2076 | 0.022* | |
| C9 | 0.9263 (3) | 0.5489 (5) | 0.26396 (11) | 0.0179 (7) | |
| C10 | 0.8168 (3) | 0.4554 (5) | 0.27559 (11) | 0.0184 (7) | |
| H10 | 0.8106 | 0.4034 | 0.3067 | 0.022* | |
| C11 | 0.7155 (3) | 0.4345 (5) | 0.24348 (11) | 0.0184 (7) | |
| H11 | 0.6424 | 0.3686 | 0.2526 | 0.022* | |
| C12 | 1.0323 (3) | 0.5790 (5) | 0.29973 (11) | 0.0224 (7) | |
| H12A | 1.0097 | 0.5253 | 0.3306 | 0.034* | |
| H12B | 1.0478 | 0.7135 | 0.3035 | 0.034* | |
| H12C | 1.1083 | 0.5178 | 0.2883 | 0.034* | |
| C13 | 0.0149 (3) | 0.2401 (5) | −0.01373 (11) | 0.0183 (7) | |
| C14 | −0.1058 (3) | 0.3001 (5) | −0.00485 (12) | 0.0212 (7) | |
| H14 | −0.1649 | 0.3152 | −0.0305 | 0.025* | |
| C15 | −0.1398 (3) | 0.3376 (5) | 0.04115 (12) | 0.0220 (7) | |
| H15 | −0.2214 | 0.3817 | 0.0482 | 0.026* | |
| C16 | −0.0491 (3) | 0.3079 (5) | 0.07704 (12) | 0.0222 (7) | |
| H16 | −0.0720 | 0.3328 | 0.1091 | 0.027* | |
| C17 | 0.1032 (3) | 0.2129 (4) | 0.02481 (11) | 0.0172 (7) | |
| C18 | 0.3186 (3) | 0.1221 (5) | 0.05334 (11) | 0.0173 (7) | |
| C19 | 0.4414 (3) | 0.1571 (5) | 0.03961 (11) | 0.0189 (7) | |
| H19 | 0.4568 | 0.2063 | 0.0087 | 0.023* | |
| C20 | 0.5413 (3) | 0.1203 (5) | 0.07102 (11) | 0.0188 (7) | |
| H20 | 0.6246 | 0.1423 | 0.0610 | 0.023* | |
| C21 | 0.5218 (3) | 0.0519 (5) | 0.11668 (11) | 0.0179 (7) | |
| C22 | 0.3992 (3) | 0.0150 (5) | 0.12938 (11) | 0.0188 (7) | |
| H22 | 0.3840 | −0.0340 | 0.1603 | 0.023* | |
| C23 | 0.2979 (3) | 0.0474 (5) | 0.09839 (11) | 0.0201 (7) | |
| H23 | 0.2151 | 0.0187 | 0.1079 | 0.024* | |
| C24 | 0.6290 (3) | 0.0200 (5) | 0.15168 (12) | 0.0242 (8) | |
| H24A | 0.7084 | 0.0220 | 0.1347 | 0.036* | |
| H24B | 0.6189 | −0.1019 | 0.1672 | 0.036* | |
| H24C | 0.6296 | 0.1190 | 0.1759 | 0.036* | |
| H3 | 0.652 (3) | 0.552 (5) | 0.1350 (8) | 0.022 (10)* | |
| H6 | 0.242 (3) | 0.153 (6) | −0.0118 (14) | 0.031 (11)* |
| O1 | 0.0175 (13) | 0.0287 (14) | 0.0210 (11) | −0.0020 (10) | −0.0014 (9) | 0.0037 (10) |
| O2 | 0.0236 (13) | 0.0349 (15) | 0.0206 (11) | 0.0030 (11) | −0.0063 (10) | 0.0061 (10) |
| O3 | 0.0235 (14) | 0.0429 (16) | 0.0195 (12) | 0.0097 (12) | −0.0008 (10) | −0.0016 (11) |
| O4 | 0.0288 (14) | 0.0353 (15) | 0.0212 (12) | −0.0007 (12) | −0.0093 (10) | 0.0011 (10) |
| N1 | 0.0209 (15) | 0.0172 (15) | 0.0178 (13) | 0.0010 (12) | −0.0025 (11) | 0.0008 (10) |
| N2 | 0.0189 (15) | 0.0212 (15) | 0.0179 (13) | −0.0001 (12) | 0.0012 (11) | −0.0003 (11) |
| N3 | 0.0131 (14) | 0.0217 (15) | 0.0140 (12) | −0.0016 (11) | −0.0009 (10) | 0.0025 (10) |
| N4 | 0.0220 (16) | 0.0199 (15) | 0.0200 (13) | −0.0018 (12) | −0.0040 (11) | 0.0017 (11) |
| N5 | 0.0177 (15) | 0.0224 (15) | 0.0198 (13) | 0.0022 (12) | 0.0000 (11) | 0.0008 (11) |
| N6 | 0.0172 (15) | 0.0254 (16) | 0.0147 (13) | 0.0025 (12) | −0.0024 (11) | 0.0008 (11) |
| C1 | 0.0215 (18) | 0.0143 (16) | 0.0156 (14) | 0.0000 (13) | 0.0000 (12) | −0.0003 (12) |
| C2 | 0.0172 (17) | 0.0174 (17) | 0.0236 (16) | 0.0017 (13) | −0.0046 (13) | −0.0006 (13) |
| C3 | 0.0127 (17) | 0.0218 (18) | 0.0274 (17) | −0.0001 (14) | 0.0007 (13) | −0.0011 (14) |
| C4 | 0.0199 (18) | 0.0232 (18) | 0.0203 (15) | −0.0021 (14) | 0.0024 (13) | −0.0003 (13) |
| C5 | 0.0170 (17) | 0.0141 (16) | 0.0173 (14) | −0.0002 (13) | −0.0004 (12) | −0.0032 (11) |
| C6 | 0.0116 (16) | 0.0171 (16) | 0.0173 (14) | 0.0012 (13) | −0.0018 (12) | −0.0027 (12) |
| C7 | 0.0172 (17) | 0.0164 (16) | 0.0171 (14) | 0.0009 (13) | 0.0009 (12) | −0.0004 (12) |
| C8 | 0.0167 (17) | 0.0159 (17) | 0.0229 (16) | 0.0000 (13) | 0.0002 (13) | 0.0001 (12) |
| C9 | 0.0185 (17) | 0.0151 (16) | 0.0198 (15) | 0.0028 (13) | −0.0025 (12) | −0.0041 (12) |
| C10 | 0.0198 (18) | 0.0206 (17) | 0.0149 (14) | 0.0042 (14) | 0.0019 (12) | 0.0002 (12) |
| C11 | 0.0171 (17) | 0.0192 (17) | 0.0189 (15) | 0.0007 (14) | 0.0014 (12) | 0.0001 (13) |
| C12 | 0.0232 (19) | 0.0211 (18) | 0.0227 (16) | −0.0005 (15) | −0.0064 (14) | −0.0014 (13) |
| C13 | 0.0208 (18) | 0.0162 (16) | 0.0180 (15) | −0.0029 (14) | −0.0017 (12) | 0.0009 (12) |
| C14 | 0.0195 (18) | 0.0172 (17) | 0.0265 (17) | −0.0050 (14) | −0.0046 (13) | 0.0044 (13) |
| C15 | 0.0148 (17) | 0.0204 (18) | 0.0309 (18) | −0.0001 (14) | 0.0025 (14) | 0.0040 (14) |
| C16 | 0.0219 (18) | 0.0226 (18) | 0.0222 (16) | 0.0002 (15) | 0.0038 (13) | 0.0028 (13) |
| C17 | 0.0181 (17) | 0.0144 (16) | 0.0190 (15) | −0.0022 (13) | −0.0026 (12) | 0.0020 (12) |
| C18 | 0.0205 (18) | 0.0145 (16) | 0.0168 (14) | 0.0019 (13) | −0.0017 (12) | −0.0019 (12) |
| C19 | 0.0236 (18) | 0.0169 (17) | 0.0162 (14) | 0.0005 (14) | 0.0032 (12) | 0.0010 (12) |
| C20 | 0.0124 (16) | 0.0218 (18) | 0.0223 (16) | 0.0000 (13) | 0.0024 (12) | −0.0021 (13) |
| C21 | 0.0172 (17) | 0.0150 (16) | 0.0214 (15) | 0.0029 (13) | −0.0036 (13) | −0.0040 (12) |
| C22 | 0.0186 (17) | 0.0214 (18) | 0.0165 (14) | 0.0020 (14) | 0.0011 (12) | 0.0030 (12) |
| C23 | 0.0167 (17) | 0.0219 (18) | 0.0217 (15) | −0.0006 (14) | 0.0023 (13) | 0.0030 (13) |
| C24 | 0.0235 (19) | 0.0256 (19) | 0.0232 (16) | 0.0044 (15) | −0.0049 (14) | −0.0019 (14) |
| O1—N1 | 1.245 (3) | C9—C10 | 1.389 (5) |
| O2—N1 | 1.230 (3) | C9—C12 | 1.507 (4) |
| O3—N4 | 1.240 (4) | C10—C11 | 1.396 (4) |
| O4—N4 | 1.236 (3) | C10—H10 | 0.9500 |
| N1—C1 | 1.452 (4) | C11—H11 | 0.9500 |
| N2—C4 | 1.335 (4) | C12—H12A | 0.9800 |
| N2—C5 | 1.343 (4) | C12—H12B | 0.9800 |
| N3—C5 | 1.359 (4) | C12—H12C | 0.9800 |
| N3—C6 | 1.412 (4) | C13—C14 | 1.383 (5) |
| N3—H3 | 0.867 (15) | C13—C17 | 1.428 (4) |
| N4—C13 | 1.446 (4) | C14—C15 | 1.370 (5) |
| N5—C16 | 1.324 (4) | C14—H14 | 0.9500 |
| N5—C17 | 1.352 (4) | C15—C16 | 1.393 (5) |
| N6—C17 | 1.345 (4) | C15—H15 | 0.9500 |
| N6—C18 | 1.422 (4) | C16—H16 | 0.9500 |
| N6—H6 | 0.88 (4) | C18—C23 | 1.390 (4) |
| C1—C2 | 1.386 (5) | C18—C19 | 1.394 (4) |
| C1—C5 | 1.422 (4) | C19—C20 | 1.390 (4) |
| C2—C3 | 1.374 (4) | C19—H19 | 0.9500 |
| C2—H2 | 0.9500 | C20—C21 | 1.387 (4) |
| C3—C4 | 1.380 (4) | C20—H20 | 0.9500 |
| C3—H3A | 0.9500 | C21—C22 | 1.388 (4) |
| C4—H4 | 0.9500 | C21—C24 | 1.505 (4) |
| C6—C11 | 1.393 (4) | C22—C23 | 1.388 (4) |
| C6—C7 | 1.397 (4) | C22—H22 | 0.9500 |
| C7—C8 | 1.377 (4) | C23—H23 | 0.9500 |
| C7—H7 | 0.9500 | C24—H24A | 0.9800 |
| C8—C9 | 1.396 (4) | C24—H24B | 0.9800 |
| C8—H8 | 0.9500 | C24—H24C | 0.9800 |
| O2—N1—O1 | 121.9 (3) | C10—C11—H11 | 120.5 |
| O2—N1—C1 | 118.6 (3) | C9—C12—H12A | 109.5 |
| O1—N1—C1 | 119.5 (2) | C9—C12—H12B | 109.5 |
| C4—N2—C5 | 118.6 (3) | H12A—C12—H12B | 109.5 |
| C5—N3—C6 | 130.6 (3) | C9—C12—H12C | 109.5 |
| C5—N3—H3 | 115 (2) | H12A—C12—H12C | 109.5 |
| C6—N3—H3 | 113 (2) | H12B—C12—H12C | 109.5 |
| O4—N4—O3 | 121.9 (3) | C14—C13—C17 | 120.4 (3) |
| O4—N4—C13 | 118.7 (3) | C14—C13—N4 | 117.1 (3) |
| O3—N4—C13 | 119.4 (3) | C17—C13—N4 | 122.5 (3) |
| C16—N5—C17 | 119.3 (3) | C15—C14—C13 | 119.7 (3) |
| C17—N6—C18 | 129.0 (3) | C15—C14—H14 | 120.2 |
| C17—N6—H6 | 113 (3) | C13—C14—H14 | 120.2 |
| C18—N6—H6 | 118 (3) | C14—C15—C16 | 116.9 (3) |
| C2—C1—C5 | 119.9 (3) | C14—C15—H15 | 121.5 |
| C2—C1—N1 | 117.2 (3) | C16—C15—H15 | 121.5 |
| C5—C1—N1 | 122.9 (3) | N5—C16—C15 | 125.0 (3) |
| C3—C2—C1 | 119.2 (3) | N5—C16—H16 | 117.5 |
| C3—C2—H2 | 120.4 | C15—C16—H16 | 117.5 |
| C1—C2—H2 | 120.4 | N6—C17—N5 | 118.1 (3) |
| C2—C3—C4 | 117.7 (3) | N6—C17—C13 | 123.2 (3) |
| C2—C3—H3A | 121.2 | N5—C17—C13 | 118.6 (3) |
| C4—C3—H3A | 121.2 | C23—C18—C19 | 119.2 (3) |
| N2—C4—C3 | 124.8 (3) | C23—C18—N6 | 123.9 (3) |
| N2—C4—H4 | 117.6 | C19—C18—N6 | 116.8 (3) |
| C3—C4—H4 | 117.6 | C20—C19—C18 | 120.2 (3) |
| N2—C5—N3 | 118.2 (3) | C20—C19—H19 | 119.9 |
| N2—C5—C1 | 119.8 (3) | C18—C19—H19 | 119.9 |
| N3—C5—C1 | 122.0 (3) | C21—C20—C19 | 121.3 (3) |
| C11—C6—C7 | 119.0 (3) | C21—C20—H20 | 119.3 |
| C11—C6—N3 | 125.7 (3) | C19—C20—H20 | 119.3 |
| C7—C6—N3 | 115.4 (3) | C22—C21—C20 | 117.7 (3) |
| C8—C7—C6 | 120.8 (3) | C22—C21—C24 | 120.7 (3) |
| C8—C7—H7 | 119.6 | C20—C21—C24 | 121.6 (3) |
| C6—C7—H7 | 119.6 | C21—C22—C23 | 122.1 (3) |
| C7—C8—C9 | 121.5 (3) | C21—C22—H22 | 118.9 |
| C7—C8—H8 | 119.3 | C23—C22—H22 | 118.9 |
| C9—C8—H8 | 119.3 | C22—C23—C18 | 119.5 (3) |
| C10—C9—C8 | 116.9 (3) | C22—C23—H23 | 120.2 |
| C10—C9—C12 | 122.3 (3) | C18—C23—H23 | 120.2 |
| C8—C9—C12 | 120.8 (3) | C21—C24—H24A | 109.5 |
| C9—C10—C11 | 122.8 (3) | C21—C24—H24B | 109.5 |
| C9—C10—H10 | 118.6 | H24A—C24—H24B | 109.5 |
| C11—C10—H10 | 118.6 | C21—C24—H24C | 109.5 |
| C6—C11—C10 | 118.9 (3) | H24A—C24—H24C | 109.5 |
| C6—C11—H11 | 120.5 | H24B—C24—H24C | 109.5 |
| O2—N1—C1—C2 | 0.8 (4) | O4—N4—C13—C14 | −1.7 (4) |
| O1—N1—C1—C2 | −178.6 (3) | O3—N4—C13—C14 | 177.3 (3) |
| O2—N1—C1—C5 | −179.0 (3) | O4—N4—C13—C17 | 179.9 (3) |
| O1—N1—C1—C5 | 1.5 (5) | O3—N4—C13—C17 | −1.1 (5) |
| C5—C1—C2—C3 | 0.3 (5) | C17—C13—C14—C15 | 1.4 (5) |
| N1—C1—C2—C3 | −179.6 (3) | N4—C13—C14—C15 | −177.0 (3) |
| C1—C2—C3—C4 | −0.1 (5) | C13—C14—C15—C16 | −1.5 (5) |
| C5—N2—C4—C3 | −0.7 (5) | C17—N5—C16—C15 | 0.9 (5) |
| C2—C3—C4—N2 | 0.3 (5) | C14—C15—C16—N5 | 0.4 (5) |
| C4—N2—C5—N3 | −179.1 (3) | C18—N6—C17—N5 | 0.8 (5) |
| C4—N2—C5—C1 | 0.8 (5) | C18—N6—C17—C13 | −179.7 (3) |
| C6—N3—C5—N2 | −11.7 (5) | C16—N5—C17—N6 | 178.6 (3) |
| C6—N3—C5—C1 | 168.4 (3) | C16—N5—C17—C13 | −0.9 (5) |
| C2—C1—C5—N2 | −0.6 (5) | C14—C13—C17—N6 | −179.7 (3) |
| N1—C1—C5—N2 | 179.2 (3) | N4—C13—C17—N6 | −1.4 (5) |
| C2—C1—C5—N3 | 179.3 (3) | C14—C13—C17—N5 | −0.2 (5) |
| N1—C1—C5—N3 | −0.8 (5) | N4—C13—C17—N5 | 178.1 (3) |
| C5—N3—C6—C11 | 22.3 (5) | C17—N6—C18—C23 | 35.9 (5) |
| C5—N3—C6—C7 | −158.4 (3) | C17—N6—C18—C19 | −148.1 (3) |
| C11—C6—C7—C8 | −2.8 (5) | C23—C18—C19—C20 | −1.0 (5) |
| N3—C6—C7—C8 | 177.8 (3) | N6—C18—C19—C20 | −177.3 (3) |
| C6—C7—C8—C9 | −0.5 (5) | C18—C19—C20—C21 | −1.3 (5) |
| C7—C8—C9—C10 | 3.1 (5) | C19—C20—C21—C22 | 2.3 (5) |
| C7—C8—C9—C12 | −176.3 (3) | C19—C20—C21—C24 | −177.1 (3) |
| C8—C9—C10—C11 | −2.6 (5) | C20—C21—C22—C23 | −1.1 (5) |
| C12—C9—C10—C11 | 176.8 (3) | C24—C21—C22—C23 | 178.3 (3) |
| C7—C6—C11—C10 | 3.2 (5) | C21—C22—C23—C18 | −1.1 (5) |
| N3—C6—C11—C10 | −177.4 (3) | C19—C18—C23—C22 | 2.2 (5) |
| C9—C10—C11—C6 | −0.6 (5) | N6—C18—C23—C22 | 178.1 (3) |
| Cg1 is the centroid of the C6–C11 ring. |
| H··· | ||||
| N3—H3···O1 | 0.87 (3) | 1.94 (3) | 2.630 (3) | 136 (3) |
| N6—H6···O3 | 0.88 (4) | 1.93 (4) | 2.639 (3) | 137 (3) |
| N3—H3···N1 | 0.87 (3) | 2.55 (3) | 2.932 (4) | 108 (2) |
| N6—H6···N4 | 0.88 (4) | 2.54 (4) | 2.942 (4) | 109 (2) |
| C14—H14···O2i | 0.95 | 2.39 | 3.199 (4) | 143 |
| C4—H4···Cg1ii | 0.95 | 2.90 | 3.604 (4) | 132 |
| C12—H12b···Cg1iii | 0.98 | 2.80 | 3.654 (4) | 146 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C6–C11 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N3—H3⋯O1 | 0.87 (3) | 1.94 (3) | 2.630 (3) | 136 (3) |
| N6—H6⋯O3 | 0.88 (4) | 1.93 (4) | 2.639 (3) | 137 (3) |
| N3—H3⋯N1 | 0.87 (3) | 2.55 (3) | 2.932 (4) | 108 (2) |
| N6—H6⋯N4 | 0.88 (4) | 2.54 (4) | 2.942 (4) | 109 (2) |
| C14—H14⋯O2i | 0.95 | 2.39 | 3.199 (4) | 143 |
| C4—H4⋯ | 0.95 | 2.90 | 3.604 (4) | 132 |
| C12—H12b⋯ | 0.98 | 2.80 | 3.654 (4) | 146 |
Symmetry codes: (i) ; (ii) ; (iii) .