| Literature DB >> 22199700 |
Aina Mardia Akhmad Aznan, Zainal Abidin Fairuz, Zanariah Abdullah, Seik Weng Ng, Edward R T Tiekink.
Abstract
In the title compound, C(11)H(8)ClN(3)O(2), the presence of intra-molecular N-H⋯O and C-H⋯N inter-actions help to establish an almost planar mol-ecule [dihedral angle between the pyridine and benzene rings = 9.89 (8)° and r.m.s. deviation for all 17 non-H atoms = 0.120 Å]. Supra-molecular tapes feature in the crystal packing whereby dimeric aggregates sustained by pairs of C-H⋯O inter-actions are connected by π-π inter-actions occurring between translationally related pyridine rings and between translationally related benzene rings along the b axis [centroid-centroid distance = length of b axis = 3.8032 (4) Å].Entities:
Year: 2011 PMID: 22199700 PMCID: PMC3238847 DOI: 10.1107/S1600536811045570
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H8ClN3O2 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 2586 reflections |
| θ = 2.3–28.0° | |
| µ = 0.36 mm−1 | |
| β = 123.153 (1)° | Prism, red-brown |
| 0.40 × 0.15 × 0.05 mm | |
| Bruker SMART APEX CCD diffractometer | 2347 independent reflections |
| Radiation source: fine-focus sealed tube | 1912 reflections with |
| graphite | |
| ω scans | θmax = 27.5°, θmin = 1.6° |
| Absorption correction: multi-scan ( | |
| 8919 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2347 reflections | (Δ/σ)max = 0.001 |
| 158 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
| Refinement. Refinement of |
| Cl1 | 0.223442 (15) | 0.15167 (11) | 0.28841 (2) | 0.01760 (13) | |
| O1 | 0.00287 (5) | 1.1095 (3) | 0.32850 (6) | 0.0239 (3) | |
| O2 | −0.01657 (5) | 1.3711 (4) | 0.40019 (7) | 0.0271 (3) | |
| N1 | 0.09477 (5) | 0.8069 (4) | 0.38672 (8) | 0.0151 (3) | |
| H1n | 0.0640 (8) | 0.866 (5) | 0.3481 (11) | 0.021 (5)* | |
| N2 | 0.14771 (5) | 0.8205 (4) | 0.51652 (7) | 0.0155 (3) | |
| N3 | 0.01356 (5) | 1.1930 (4) | 0.39171 (8) | 0.0180 (3) | |
| C1 | 0.10203 (6) | 0.9037 (4) | 0.45291 (9) | 0.0141 (3) | |
| C2 | 0.06265 (6) | 1.0832 (4) | 0.45711 (9) | 0.0148 (3) | |
| C3 | 0.07133 (7) | 1.1672 (4) | 0.52649 (9) | 0.0175 (3) | |
| H3 | 0.0452 | 1.2859 | 0.5296 | 0.021* | |
| C4 | 0.11814 (7) | 1.0768 (4) | 0.59046 (9) | 0.0181 (4) | |
| H4 | 0.1252 | 1.1299 | 0.6388 | 0.022* | |
| C5 | 0.15475 (6) | 0.9047 (4) | 0.58188 (9) | 0.0172 (3) | |
| H5 | 0.1872 | 0.8427 | 0.6261 | 0.021* | |
| C6 | 0.12870 (6) | 0.6443 (4) | 0.36965 (9) | 0.0137 (3) | |
| C7 | 0.18163 (6) | 0.5712 (4) | 0.42051 (9) | 0.0161 (3) | |
| H7 | 0.1978 | 0.6249 | 0.4722 | 0.019* | |
| C8 | 0.21055 (6) | 0.4195 (4) | 0.39510 (9) | 0.0163 (3) | |
| H8 | 0.2467 | 0.3708 | 0.4294 | 0.020* | |
| C9 | 0.18699 (6) | 0.3393 (4) | 0.32026 (9) | 0.0149 (3) | |
| C10 | 0.13421 (6) | 0.4065 (4) | 0.26931 (9) | 0.0161 (3) | |
| H10 | 0.1181 | 0.3478 | 0.2179 | 0.019* | |
| C11 | 0.10550 (6) | 0.5593 (4) | 0.29426 (9) | 0.0158 (3) | |
| H11 | 0.0694 | 0.6076 | 0.2596 | 0.019* |
| Cl1 | 0.0176 (2) | 0.0184 (2) | 0.0213 (2) | 0.00078 (16) | 0.01348 (17) | −0.00104 (16) |
| O1 | 0.0167 (6) | 0.0340 (8) | 0.0164 (6) | 0.0051 (5) | 0.0062 (5) | −0.0024 (5) |
| O2 | 0.0182 (6) | 0.0350 (8) | 0.0279 (7) | 0.0118 (6) | 0.0125 (5) | −0.0006 (6) |
| N1 | 0.0103 (7) | 0.0182 (7) | 0.0148 (6) | 0.0020 (6) | 0.0056 (6) | −0.0004 (6) |
| N2 | 0.0130 (7) | 0.0168 (7) | 0.0157 (6) | 0.0005 (6) | 0.0071 (6) | 0.0011 (5) |
| N3 | 0.0148 (7) | 0.0186 (7) | 0.0213 (7) | 0.0018 (6) | 0.0103 (6) | −0.0002 (6) |
| C1 | 0.0148 (8) | 0.0107 (8) | 0.0176 (7) | −0.0025 (6) | 0.0094 (6) | −0.0004 (6) |
| C2 | 0.0115 (8) | 0.0141 (8) | 0.0184 (8) | −0.0007 (6) | 0.0079 (6) | −0.0003 (6) |
| C3 | 0.0197 (8) | 0.0143 (8) | 0.0234 (8) | 0.0004 (7) | 0.0148 (7) | 0.0006 (6) |
| C4 | 0.0225 (9) | 0.0167 (8) | 0.0178 (8) | −0.0018 (7) | 0.0128 (7) | −0.0008 (6) |
| C5 | 0.0157 (8) | 0.0178 (9) | 0.0161 (7) | −0.0009 (7) | 0.0073 (6) | 0.0013 (6) |
| C6 | 0.0145 (8) | 0.0104 (8) | 0.0178 (7) | −0.0013 (6) | 0.0098 (6) | 0.0000 (6) |
| C7 | 0.0157 (8) | 0.0170 (8) | 0.0152 (7) | −0.0004 (7) | 0.0082 (7) | −0.0016 (6) |
| C8 | 0.0115 (8) | 0.0174 (8) | 0.0183 (8) | 0.0000 (6) | 0.0070 (6) | −0.0001 (6) |
| C9 | 0.0168 (8) | 0.0114 (8) | 0.0206 (8) | 0.0000 (6) | 0.0129 (7) | 0.0004 (6) |
| C10 | 0.0163 (8) | 0.0158 (8) | 0.0149 (7) | −0.0015 (6) | 0.0078 (6) | −0.0006 (6) |
| C11 | 0.0129 (8) | 0.0148 (8) | 0.0169 (7) | −0.0004 (6) | 0.0065 (6) | 0.0003 (6) |
| Cl1—C9 | 1.7400 (16) | C4—C5 | 1.389 (2) |
| O1—N3 | 1.2408 (18) | C4—H4 | 0.9500 |
| O2—N3 | 1.2312 (18) | C5—H5 | 0.9500 |
| N1—C1 | 1.353 (2) | C6—C11 | 1.393 (2) |
| N1—C6 | 1.412 (2) | C6—C7 | 1.393 (2) |
| N1—H1n | 0.87 (2) | C7—C8 | 1.387 (2) |
| N2—C5 | 1.327 (2) | C7—H7 | 0.9500 |
| N2—C1 | 1.346 (2) | C8—C9 | 1.378 (2) |
| N3—C2 | 1.440 (2) | C8—H8 | 0.9500 |
| C1—C2 | 1.426 (2) | C9—C10 | 1.386 (2) |
| C2—C3 | 1.389 (2) | C10—C11 | 1.376 (2) |
| C3—C4 | 1.372 (2) | C10—H10 | 0.9500 |
| C3—H3 | 0.9500 | C11—H11 | 0.9500 |
| C1—N1—C6 | 131.43 (14) | N2—C5—H5 | 117.6 |
| C1—N1—H1n | 113.1 (12) | C4—C5—H5 | 117.6 |
| C6—N1—H1n | 115.4 (12) | C11—C6—C7 | 119.45 (15) |
| C5—N2—C1 | 118.99 (14) | C11—C6—N1 | 114.64 (14) |
| O2—N3—O1 | 121.71 (14) | C7—C6—N1 | 125.90 (14) |
| O2—N3—C2 | 118.75 (13) | C8—C7—C6 | 119.47 (14) |
| O1—N3—C2 | 119.54 (13) | C8—C7—H7 | 120.3 |
| N2—C1—N1 | 118.36 (14) | C6—C7—H7 | 120.3 |
| N2—C1—C2 | 119.48 (14) | C9—C8—C7 | 120.22 (15) |
| N1—C1—C2 | 122.15 (14) | C9—C8—H8 | 119.9 |
| C3—C2—C1 | 120.01 (15) | C7—C8—H8 | 119.9 |
| C3—C2—N3 | 117.09 (14) | C8—C9—C10 | 120.84 (15) |
| C1—C2—N3 | 122.88 (14) | C8—C9—Cl1 | 120.15 (13) |
| C4—C3—C2 | 119.25 (15) | C10—C9—Cl1 | 119.02 (12) |
| C4—C3—H3 | 120.4 | C11—C10—C9 | 119.08 (15) |
| C2—C3—H3 | 120.4 | C11—C10—H10 | 120.5 |
| C3—C4—C5 | 117.45 (15) | C9—C10—H10 | 120.5 |
| C3—C4—H4 | 121.3 | C10—C11—C6 | 120.93 (15) |
| C5—C4—H4 | 121.3 | C10—C11—H11 | 119.5 |
| N2—C5—C4 | 124.83 (15) | C6—C11—H11 | 119.5 |
| C5—N2—C1—N1 | −178.05 (15) | C1—N2—C5—C4 | −0.2 (3) |
| C5—N2—C1—C2 | 0.7 (2) | C3—C4—C5—N2 | −0.2 (3) |
| C6—N1—C1—N2 | −4.5 (3) | C1—N1—C6—C11 | 175.03 (16) |
| C6—N1—C1—C2 | 176.74 (16) | C1—N1—C6—C7 | −6.0 (3) |
| N2—C1—C2—C3 | −0.7 (2) | C11—C6—C7—C8 | 0.9 (2) |
| N1—C1—C2—C3 | 177.97 (16) | N1—C6—C7—C8 | −178.01 (15) |
| N2—C1—C2—N3 | 177.63 (14) | C6—C7—C8—C9 | −0.5 (3) |
| N1—C1—C2—N3 | −3.7 (3) | C7—C8—C9—C10 | −0.3 (3) |
| O2—N3—C2—C3 | 4.2 (2) | C7—C8—C9—Cl1 | 179.57 (13) |
| O1—N3—C2—C3 | −176.53 (15) | C8—C9—C10—C11 | 0.8 (2) |
| O2—N3—C2—C1 | −174.27 (15) | Cl1—C9—C10—C11 | −179.10 (13) |
| O1—N3—C2—C1 | 5.0 (2) | C9—C10—C11—C6 | −0.4 (3) |
| C1—C2—C3—C4 | 0.3 (3) | C7—C6—C11—C10 | −0.4 (2) |
| N3—C2—C3—C4 | −178.19 (15) | N1—C6—C11—C10 | 178.60 (15) |
| C2—C3—C4—C5 | 0.2 (3) |
| H··· | ||||
| N1—H1n···O1 | 0.87 (2) | 1.91 (2) | 2.6280 (18) | 138.2 (17) |
| C7—H7···N2 | 0.95 | 2.31 | 2.909 (2) | 120 |
| C3—H3···O2i | 0.95 | 2.48 | 3.340 (3) | 152 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.87 (2) | 1.91 (2) | 2.6280 (18) | 138.2 (17) |
| C7—H7⋯N2 | 0.95 | 2.31 | 2.909 (2) | 120 |
| C3—H3⋯O2i | 0.95 | 2.48 | 3.340 (3) | 152 |
Symmetry code: (i) .