Literature DB >> 21588707

5-(4-Fluoro-benzyl-idene)-2,2-dimethyl-1,3-dioxane-4,6-dione.

Wu-Lan Zeng1.   

Abstract

The title compound, C(13)H(11)FO(4), was prepared by the reaction of 2,2-dimethyl-1,3-dioxane-4,6-dione and 4-fluoro-benz-alde-hyde in ethanol. The 1,3-dioxane ring adopts an envelope conformation. The crystal structure is stabilized by weak inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21588707      PMCID: PMC3008134          DOI: 10.1107/S1600536810033155

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information on the use of Meldrum’s acid (2,2-dimethyl-1,3-dioxane-4,6-dione) in organic synthesis, see: Kuhn et al. (2003 ▶); Casadesus et al. (2006 ▶). For a related structure, see: Zeng & Jian (2009 ▶).

Experimental

Crystal data

C13H11FO4 M = 250.22 Monoclinic, a = 10.607 (2) Å b = 10.413 (2) Å c = 11.366 (2) Å β = 106.09 (3)° V = 1206.2 (4) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 293 K 0.17 × 0.15 × 0.10 mm

Data collection

Bruker SMART CCD diffractometer 11341 measured reflections 2748 independent reflections 1773 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.182 S = 1.16 2748 reflections 163 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.24 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810033155/lh5116sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810033155/lh5116Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H11FO4F(000) = 520
Mr = 250.22Dx = 1.378 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2748 reflections
a = 10.607 (2) Åθ = 3.0–27.5°
b = 10.413 (2) ŵ = 0.11 mm1
c = 11.366 (2) ÅT = 293 K
β = 106.09 (3)°Block, colorless
V = 1206.2 (4) Å30.17 × 0.15 × 0.10 mm
Z = 4
Bruker SMART CCD diffractometer1773 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.042
graphiteθmax = 27.5°, θmin = 3.0°
φ and ω scansh = −13→13
11341 measured reflectionsk = −13→13
2748 independent reflectionsl = −14→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.182H-atom parameters constrained
S = 1.16w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
2748 reflections(Δ/σ)max < 0.001
163 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O20.19531 (11)0.04581 (14)0.03108 (11)0.0683 (4)
O40.48662 (11)0.09217 (13)−0.12156 (11)0.0669 (4)
O10.29516 (11)0.01292 (14)−0.12672 (11)0.0685 (4)
C70.46120 (16)0.27281 (18)0.07462 (14)0.0588 (4)
H7A0.44520.30290.14620.071*
O30.27783 (14)0.17669 (16)0.18433 (12)0.0848 (5)
C50.38086 (15)0.17577 (16)0.02221 (13)0.0541 (4)
C40.39340 (15)0.09646 (17)−0.08040 (15)0.0566 (4)
C80.56723 (16)0.34028 (17)0.04331 (14)0.0577 (4)
C60.28220 (17)0.13664 (19)0.08633 (16)0.0625 (5)
C30.17201 (16)0.0255 (2)−0.09776 (16)0.0661 (5)
C130.65632 (18)0.4046 (2)0.13807 (17)0.0693 (5)
H13A0.64600.40080.21660.083*
C90.5822 (2)0.3527 (2)−0.07392 (17)0.0706 (5)
H9A0.52260.3128−0.13940.085*
F10.86826 (14)0.55357 (17)−0.01890 (16)0.1227 (6)
C100.6833 (2)0.4228 (2)−0.0945 (2)0.0837 (6)
H10A0.69280.4306−0.17310.100*
C20.0951 (2)0.1370 (2)−0.16850 (19)0.0837 (6)
H2A0.14440.2149−0.14620.126*
H2B0.01280.1447−0.14940.126*
H2C0.07940.1222−0.25470.126*
C120.75946 (19)0.4739 (2)0.1185 (2)0.0806 (6)
H12A0.82000.51440.18280.097*
C110.7695 (2)0.4809 (2)0.0023 (2)0.0814 (6)
C10.1052 (2)−0.1014 (2)−0.1254 (2)0.0918 (7)
H1A0.1597−0.1669−0.07750.138*
H1B0.0900−0.1205−0.21090.138*
H1C0.0229−0.0986−0.10580.138*
U11U22U33U12U13U23
O20.0660 (7)0.0800 (9)0.0650 (8)−0.0019 (6)0.0283 (6)0.0010 (6)
O40.0655 (7)0.0787 (9)0.0648 (8)0.0073 (6)0.0321 (6)−0.0021 (6)
O10.0620 (7)0.0813 (9)0.0663 (8)−0.0011 (6)0.0244 (6)−0.0140 (6)
C70.0654 (9)0.0671 (11)0.0449 (8)0.0118 (8)0.0173 (7)0.0042 (7)
O30.0943 (10)0.1107 (13)0.0621 (8)−0.0072 (8)0.0427 (7)−0.0087 (7)
C50.0562 (8)0.0627 (10)0.0464 (8)0.0083 (7)0.0192 (6)0.0048 (7)
C40.0580 (9)0.0631 (10)0.0500 (8)0.0089 (7)0.0169 (7)0.0027 (7)
C80.0615 (9)0.0602 (10)0.0516 (9)0.0086 (7)0.0162 (7)0.0035 (7)
C60.0659 (10)0.0709 (12)0.0552 (10)0.0076 (8)0.0244 (8)0.0058 (8)
C30.0568 (9)0.0811 (13)0.0635 (10)0.0024 (8)0.0219 (8)−0.0051 (9)
C130.0696 (11)0.0759 (13)0.0609 (10)0.0036 (9)0.0157 (8)−0.0028 (9)
C90.0817 (12)0.0749 (13)0.0558 (10)−0.0003 (10)0.0199 (9)0.0067 (8)
F10.0936 (9)0.1271 (13)0.1624 (16)−0.0198 (9)0.0608 (10)0.0147 (10)
C100.0994 (15)0.0889 (16)0.0738 (13)0.0043 (12)0.0424 (12)0.0138 (11)
C20.0683 (11)0.0995 (16)0.0783 (13)0.0120 (11)0.0121 (10)0.0050 (12)
C120.0655 (11)0.0870 (15)0.0845 (14)−0.0003 (10)0.0130 (10)−0.0014 (11)
C110.0621 (10)0.0815 (14)0.1091 (16)0.0033 (10)0.0377 (11)0.0108 (13)
C10.0819 (13)0.0876 (16)0.1103 (18)−0.0143 (11)0.0337 (12)−0.0196 (13)
O2—C61.348 (2)C13—C121.379 (3)
O2—C31.432 (2)C13—H13A0.9300
O4—C41.2063 (19)C9—C101.370 (3)
O1—C41.347 (2)C9—H9A0.9300
O1—C31.4388 (19)F1—C111.367 (2)
C7—C51.349 (2)C10—C111.362 (3)
C7—C81.451 (2)C10—H10A0.9300
C7—H7A0.9300C2—H2A0.9600
O3—C61.202 (2)C2—H2B0.9600
C5—C41.465 (2)C2—H2C0.9600
C5—C61.488 (2)C12—C111.356 (3)
C8—C91.391 (2)C12—H12A0.9300
C8—C131.392 (3)C1—H1A0.9600
C3—C11.491 (3)C1—H1B0.9600
C3—C21.516 (3)C1—H1C0.9600
C6—O2—C3118.82 (14)C8—C13—H13A119.1
C4—O1—C3120.31 (14)C10—C9—C8121.03 (19)
C5—C7—C8133.77 (16)C10—C9—H9A119.5
C5—C7—H7A113.1C8—C9—H9A119.5
C8—C7—H7A113.1C11—C10—C9118.7 (2)
C7—C5—C4126.02 (15)C11—C10—H10A120.6
C7—C5—C6115.63 (15)C9—C10—H10A120.6
C4—C5—C6117.82 (15)C3—C2—H2A109.5
O4—C4—O1116.92 (15)C3—C2—H2B109.5
O4—C4—C5126.49 (16)H2A—C2—H2B109.5
O1—C4—C5116.36 (14)C3—C2—H2C109.5
C9—C8—C13117.60 (18)H2A—C2—H2C109.5
C9—C8—C7125.56 (16)H2B—C2—H2C109.5
C13—C8—C7116.70 (15)C11—C12—C13117.8 (2)
O3—C6—O2118.56 (17)C11—C12—H12A121.1
O3—C6—C5124.86 (18)C13—C12—H12A121.1
O2—C6—C5116.53 (15)C12—C11—C10123.1 (2)
O2—C3—O1109.70 (13)C12—C11—F1118.2 (2)
O2—C3—C1106.49 (17)C10—C11—F1118.6 (2)
O1—C3—C1106.23 (16)C3—C1—H1A109.5
O2—C3—C2110.14 (16)C3—C1—H1B109.5
O1—C3—C2109.73 (16)H1A—C1—H1B109.5
C1—C3—C2114.39 (16)C3—C1—H1C109.5
C12—C13—C8121.71 (19)H1A—C1—H1C109.5
C12—C13—H13A119.1H1B—C1—H1C109.5
D—H···AD—HH···AD···AD—H···A
C10—H10A···O1i0.932.473.373 (3)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C10—H10A⋯O1i0.932.473.373 (3)164

Symmetry code: (i) .

  3 in total

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2.  A short history of SHELX.

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Authors:  Wu-Lan Zeng; Fang-Fang Jian
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-30
  3 in total
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