Literature DB >> 21578023

5-(2-Fluoro-benzyl-idene)-2,2-dimethyl-1,3-dioxane-4,6-dione.

Wu-Lan Zeng, Fang-Fang Jian.   

Abstract

The title compound, C(13)H(11)FO(4), was prepared by the reaction of 2,2-dimethyl-1,3-dioxane-4,6-dione and 2-fluoro-benzaldehyde in ethanol. In the crystal structure, mol-ecules are linked into chains by weak inter-molecular C-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21578023      PMCID: PMC2970368          DOI: 10.1107/S1600536809038811

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the use of Meldrum’s acid as a reagent in organic synthesis, see: Kuhn et al. (2003 ▶); Casadesus et al. (2006 ▶).

Experimental

Crystal data

C13H11FO4 M = 250.22 Triclinic, a = 5.9907 (12) Å b = 7.6135 (15) Å c = 13.712 (3) Å α = 104.66 (3)° β = 97.00 (3)° γ = 98.50 (3)° V = 590.0 (2) Å3 Z = 2 Mo Kα radiation μ = 0.12 mm−1 T = 293 K 0.18 × 0.15 × 0.10 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: none 5846 measured reflections 2680 independent reflections 2232 reflections with I > 2σ(I) R int = 0.015

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.122 S = 1.09 2680 reflections 163 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.21 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809038811/lh2910sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809038811/lh2910Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H11FO4Z = 2
Mr = 250.22F(000) = 260
Triclinic, P1Dx = 1.408 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.9907 (12) ÅCell parameters from 2680 reflections
b = 7.6135 (15) Åθ = 3.1–27.5°
c = 13.712 (3) ŵ = 0.12 mm1
α = 104.66 (3)°T = 293 K
β = 97.00 (3)°Block, colorless
γ = 98.50 (3)°0.18 × 0.15 × 0.10 mm
V = 590.0 (2) Å3
Bruker SMART CCD diffractometer2232 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.015
graphiteθmax = 27.5°, θmin = 3.1°
φ and ω scansh = −7→7
5846 measured reflectionsk = −9→9
2680 independent reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0689P)2 + 0.0762P] where P = (Fo2 + 2Fc2)/3
2680 reflections(Δ/σ)max < 0.001
163 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O40.24998 (15)0.52398 (12)0.08949 (6)0.0433 (2)
F−0.21328 (14)0.74829 (12)0.22191 (7)0.0610 (3)
O30.42130 (16)0.39182 (13)0.21066 (7)0.0487 (2)
O20.19470 (18)0.81052 (13)0.13437 (7)0.0532 (3)
C100.22839 (19)0.67636 (17)0.16038 (9)0.0387 (3)
O10.5140 (2)0.54637 (16)0.37345 (8)0.0694 (4)
C40.0848 (2)0.93620 (17)0.35028 (9)0.0418 (3)
C110.2576 (2)0.35465 (17)0.11792 (9)0.0413 (3)
C70.2194 (2)0.78997 (18)0.34775 (9)0.0436 (3)
H7A0.27800.77900.41150.052*
C90.2713 (2)0.66953 (16)0.26804 (9)0.0390 (3)
C6−0.2546 (2)1.0510 (2)0.29876 (11)0.0521 (3)
H6A−0.39671.03060.25780.063*
C5−0.1258 (2)0.91420 (18)0.29004 (9)0.0430 (3)
C80.4099 (2)0.53311 (18)0.29079 (10)0.0455 (3)
C30.1648 (3)1.1072 (2)0.42261 (11)0.0547 (4)
H3A0.30341.12610.46600.066*
C130.3522 (3)0.2316 (2)0.03544 (11)0.0592 (4)
H13A0.50070.29230.03010.089*
H13B0.25160.2058−0.02860.089*
H13C0.36490.11790.05200.089*
C20.0417 (3)1.2483 (2)0.43080 (12)0.0613 (4)
H2A0.10041.36270.47750.074*
C1−0.1683 (3)1.2195 (2)0.36964 (12)0.0582 (4)
H1A−0.25221.31410.37620.070*
C120.0242 (3)0.2714 (2)0.13214 (12)0.0566 (4)
H12A−0.02660.35640.18560.085*
H12B0.03170.15830.15030.085*
H12C−0.08150.24620.06960.085*
U11U22U33U12U13U23
O40.0517 (5)0.0425 (5)0.0385 (4)0.0132 (4)0.0100 (4)0.0124 (4)
F0.0480 (5)0.0557 (5)0.0669 (5)0.0051 (4)−0.0003 (4)0.0021 (4)
O30.0514 (5)0.0451 (5)0.0475 (5)0.0221 (4)−0.0027 (4)0.0065 (4)
O20.0690 (6)0.0492 (5)0.0510 (5)0.0235 (5)0.0113 (4)0.0233 (4)
C100.0364 (5)0.0409 (6)0.0410 (6)0.0114 (5)0.0064 (5)0.0129 (5)
O10.0878 (8)0.0677 (7)0.0492 (6)0.0420 (6)−0.0159 (5)0.0068 (5)
C40.0452 (6)0.0436 (7)0.0389 (6)0.0171 (5)0.0077 (5)0.0103 (5)
C110.0442 (6)0.0387 (6)0.0402 (6)0.0099 (5)0.0034 (5)0.0098 (5)
C70.0463 (6)0.0461 (7)0.0387 (6)0.0170 (5)0.0013 (5)0.0100 (5)
C90.0390 (6)0.0393 (6)0.0394 (6)0.0128 (5)0.0017 (5)0.0114 (5)
C60.0409 (6)0.0620 (9)0.0593 (8)0.0191 (6)0.0085 (6)0.0218 (7)
C50.0411 (6)0.0440 (7)0.0440 (6)0.0089 (5)0.0080 (5)0.0110 (5)
C80.0485 (7)0.0431 (7)0.0441 (6)0.0183 (5)−0.0014 (5)0.0092 (5)
C30.0550 (8)0.0542 (8)0.0479 (7)0.0200 (6)−0.0012 (6)0.0007 (6)
C130.0701 (9)0.0534 (8)0.0528 (8)0.0230 (7)0.0137 (7)0.0042 (6)
C20.0728 (10)0.0465 (8)0.0605 (8)0.0221 (7)0.0086 (7)0.0022 (6)
C10.0653 (9)0.0537 (8)0.0661 (9)0.0319 (7)0.0188 (7)0.0200 (7)
C120.0525 (8)0.0538 (8)0.0599 (8)−0.0008 (6)0.0093 (6)0.0155 (6)
O4—C101.3460 (15)C9—C81.4904 (17)
O4—C111.4434 (15)C6—C51.3753 (19)
F—C51.3529 (16)C6—C11.381 (2)
O3—C81.3457 (16)C6—H6A0.9300
O3—C111.4460 (15)C3—C21.380 (2)
O2—C101.1996 (15)C3—H3A0.9300
C10—C91.4826 (16)C13—H13A0.9600
O1—C81.1979 (16)C13—H13B0.9600
C4—C51.3843 (18)C13—H13C0.9600
C4—C31.3978 (19)C2—C11.379 (2)
C4—C71.4639 (17)C2—H2A0.9300
C11—C131.5018 (18)C1—H1A0.9300
C11—C121.5041 (19)C12—H12A0.9600
C7—C91.3385 (17)C12—H12B0.9600
C7—H7A0.9300C12—H12C0.9600
C10—O4—C11119.32 (9)C6—C5—C4123.07 (13)
C8—O3—C11118.75 (9)O1—C8—O3119.85 (12)
O2—C10—O4119.30 (11)O1—C8—C9124.13 (12)
O2—C10—C9124.62 (11)O3—C8—C9115.98 (11)
O4—C10—C9115.80 (10)C2—C3—C4121.18 (14)
C5—C4—C3116.79 (12)C2—C3—H3A119.4
C5—C4—C7124.51 (12)C4—C3—H3A119.4
C3—C4—C7118.56 (12)C11—C13—H13A109.5
O4—C11—O3109.41 (10)C11—C13—H13B109.5
O4—C11—C13106.34 (11)H13A—C13—H13B109.5
O3—C11—C13106.18 (11)C11—C13—H13C109.5
O4—C11—C12110.47 (11)H13A—C13—H13C109.5
O3—C11—C12110.71 (11)H13B—C13—H13C109.5
C13—C11—C12113.52 (12)C1—C2—C3119.93 (14)
C9—C7—C4130.10 (11)C1—C2—H2A120.0
C9—C7—H7A114.9C3—C2—H2A120.0
C4—C7—H7A114.9C2—C1—C6120.39 (13)
C7—C9—C10125.14 (11)C2—C1—H1A119.8
C7—C9—C8117.26 (11)C6—C1—H1A119.8
C10—C9—C8117.09 (10)C11—C12—H12A109.5
C5—C6—C1118.59 (13)C11—C12—H12B109.5
C5—C6—H6A120.7H12A—C12—H12B109.5
C1—C6—H6A120.7C11—C12—H12C109.5
F—C5—C6118.32 (12)H12A—C12—H12C109.5
F—C5—C4118.57 (12)H12B—C12—H12C109.5
D—H···AD—HH···AD···AD—H···A
C1—H1A···O1i0.932.423.343 (4)174
C7—H7A···O10.932.422.798 (2)104
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1A⋯O1i0.932.423.343 (4)174

Symmetry code: (i) .

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