| Literature DB >> 21523135 |
Abstract
The asymmetric unit of the title compound, C(12)H(12)O(5), contains two independent mol-ecules. In each, the 1,3-dioxane ring adopts an envelope conformation with the dimethyl-substituted C atom forming the flap. The crystal structure is stabilized by weak inter-molecular C-H⋯O hydrogen bonds.Entities:
Year: 2011 PMID: 21523135 PMCID: PMC3051482 DOI: 10.1107/S1600536811002285
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H12O5 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3333 reflections | |
| θ = 3.1–27.5° | |
| µ = 0.11 mm−1 | |
| α = 92.71 (3)° | |
| β = 105.99 (3)° | Block, yellow |
| γ = 91.67 (3)° | 0.20 × 0.16 × 0.12 mm |
| Bruker SMART CCD area-detector diffractometer | 3333 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 3.1° |
| φ and ω scans | |
| 11592 measured reflections | |
| 5336 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 5336 reflections | (Δ/σ)max = 0.001 |
| 307 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O2B | 0.11969 (13) | 0.55646 (11) | 0.62210 (9) | 0.0618 (3) | |
| O5B | 0.45369 (14) | 1.05664 (10) | 0.82774 (9) | 0.0563 (3) | |
| O1B | 0.34137 (15) | 0.48325 (11) | 0.74003 (9) | 0.0645 (3) | |
| C5B | 0.29935 (18) | 0.71777 (15) | 0.73236 (11) | 0.0467 (4) | |
| O3B | 0.06239 (14) | 0.76729 (12) | 0.61279 (9) | 0.0671 (3) | |
| O4B | 0.48827 (17) | 0.61623 (12) | 0.86197 (9) | 0.0749 (4) | |
| C6B | 0.3859 (2) | 0.60755 (16) | 0.78319 (12) | 0.0536 (4) | |
| C7B | 0.33715 (18) | 0.84921 (15) | 0.75839 (11) | 0.0485 (4) | |
| H7BA | 0.2651 | 0.9054 | 0.7206 | 0.058* | |
| C4B | 0.15441 (19) | 0.68642 (16) | 0.65155 (12) | 0.0522 (4) | |
| C8B | 0.46201 (19) | 0.91860 (14) | 0.83032 (11) | 0.0481 (4) | |
| C9B | 0.5954 (2) | 0.89135 (17) | 0.90245 (12) | 0.0564 (4) | |
| H9BA | 0.6302 | 0.8070 | 0.9202 | 0.068* | |
| C3B | 0.2442 (2) | 0.46641 (16) | 0.63735 (13) | 0.0573 (4) | |
| C11B | 0.5813 (2) | 1.11096 (17) | 0.89765 (13) | 0.0569 (4) | |
| C10B | 0.6699 (2) | 1.01280 (18) | 0.94451 (14) | 0.0622 (4) | |
| H10A | 0.7635 | 1.0245 | 0.9955 | 0.075* | |
| C1B | 0.1707 (3) | 0.32824 (18) | 0.62731 (17) | 0.0801 (6) | |
| H1BA | 0.1141 | 0.3201 | 0.6774 | 0.120* | |
| H1BB | 0.2501 | 0.2640 | 0.6381 | 0.120* | |
| H1BC | 0.1008 | 0.3123 | 0.5600 | 0.120* | |
| C2B | 0.3372 (3) | 0.4908 (2) | 0.56325 (16) | 0.0780 (6) | |
| H2BA | 0.3813 | 0.5805 | 0.5749 | 0.117* | |
| H2BB | 0.2708 | 0.4787 | 0.4946 | 0.117* | |
| H2BC | 0.4191 | 0.4290 | 0.5728 | 0.117* | |
| C12B | 0.5961 (3) | 1.25844 (18) | 0.90908 (17) | 0.0785 (6) | |
| H12A | 0.5088 | 1.2952 | 0.8619 | 0.118* | |
| H12B | 0.6903 | 1.2885 | 0.8950 | 0.118* | |
| H12C | 0.5986 | 1.2874 | 0.9778 | 0.118* | |
| O5A | 0.07339 (13) | 0.59957 (9) | 0.88357 (8) | 0.0527 (3) | |
| O2A | −0.36509 (13) | 0.95250 (10) | 0.63621 (9) | 0.0573 (3) | |
| O3A | −0.35857 (14) | 0.73997 (11) | 0.66614 (9) | 0.0617 (3) | |
| C5A | −0.14448 (18) | 0.87879 (13) | 0.76199 (11) | 0.0447 (3) | |
| O1A | −0.17387 (16) | 1.11015 (10) | 0.72684 (10) | 0.0698 (4) | |
| C8A | −0.05825 (18) | 0.64850 (14) | 0.81836 (11) | 0.0447 (3) | |
| C7A | −0.05103 (18) | 0.78842 (14) | 0.81679 (12) | 0.0468 (4) | |
| H7AA | 0.0371 | 0.8277 | 0.8635 | 0.056* | |
| C4A | −0.29180 (18) | 0.84726 (14) | 0.68578 (11) | 0.0461 (4) | |
| C6A | −0.0910 (2) | 1.01900 (15) | 0.78701 (14) | 0.0596 (4) | |
| O4A | 0.01460 (18) | 1.05984 (12) | 0.85763 (12) | 0.0924 (5) | |
| C11A | 0.0546 (2) | 0.46486 (14) | 0.87915 (13) | 0.0529 (4) | |
| C9A | −0.1573 (2) | 0.54271 (14) | 0.77519 (13) | 0.0556 (4) | |
| H9AA | −0.2548 | 0.5464 | 0.7287 | 0.067* | |
| C3A | −0.2727 (2) | 1.06729 (15) | 0.62802 (13) | 0.0592 (4) | |
| C10A | −0.0843 (2) | 0.42757 (15) | 0.81423 (14) | 0.0614 (5) | |
| H10B | −0.1249 | 0.3404 | 0.7981 | 0.074* | |
| C2A | −0.3843 (3) | 1.17833 (18) | 0.59790 (17) | 0.0892 (7) | |
| H2AA | −0.4385 | 1.1928 | 0.6490 | 0.134* | |
| H2AB | −0.4578 | 1.1538 | 0.5332 | 0.134* | |
| H2AC | −0.3273 | 1.2588 | 0.5924 | 0.134* | |
| C12A | 0.1835 (2) | 0.39080 (17) | 0.94262 (15) | 0.0713 (5) | |
| H12D | 0.1569 | 0.2968 | 0.9333 | 0.107* | |
| H12E | 0.2009 | 0.4190 | 1.0134 | 0.107* | |
| H12F | 0.2763 | 0.4085 | 0.9223 | 0.107* | |
| C1A | −0.1792 (3) | 1.0368 (2) | 0.55522 (18) | 0.0901 (7) | |
| H1AA | −0.1115 | 0.9659 | 0.5798 | 0.135* | |
| H1AB | −0.1182 | 1.1149 | 0.5499 | 0.135* | |
| H1AC | −0.2475 | 1.0099 | 0.4891 | 0.135* |
| O2B | 0.0499 (7) | 0.0631 (7) | 0.0632 (7) | −0.0012 (5) | 0.0031 (6) | −0.0101 (6) |
| O5B | 0.0605 (7) | 0.0498 (6) | 0.0555 (6) | 0.0040 (5) | 0.0110 (6) | 0.0001 (5) |
| O1B | 0.0751 (9) | 0.0494 (6) | 0.0566 (7) | 0.0003 (5) | −0.0020 (6) | 0.0017 (5) |
| C5B | 0.0457 (9) | 0.0530 (8) | 0.0388 (8) | 0.0032 (6) | 0.0071 (7) | 0.0021 (6) |
| O3B | 0.0566 (8) | 0.0765 (8) | 0.0591 (7) | 0.0159 (6) | 0.0000 (6) | 0.0020 (6) |
| O4B | 0.0855 (10) | 0.0592 (7) | 0.0587 (8) | 0.0038 (6) | −0.0165 (7) | 0.0077 (6) |
| C6B | 0.0573 (10) | 0.0513 (9) | 0.0462 (9) | 0.0001 (7) | 0.0048 (8) | 0.0017 (7) |
| C7B | 0.0483 (9) | 0.0521 (8) | 0.0441 (8) | 0.0068 (7) | 0.0102 (7) | 0.0045 (7) |
| C4B | 0.0492 (9) | 0.0614 (9) | 0.0452 (8) | 0.0050 (7) | 0.0119 (7) | 0.0006 (7) |
| C8B | 0.0540 (9) | 0.0444 (8) | 0.0448 (8) | 0.0049 (6) | 0.0119 (7) | 0.0017 (6) |
| C9B | 0.0564 (10) | 0.0574 (9) | 0.0510 (9) | 0.0078 (7) | 0.0073 (8) | 0.0010 (8) |
| C3B | 0.0585 (11) | 0.0549 (9) | 0.0519 (9) | 0.0040 (7) | 0.0055 (8) | −0.0035 (7) |
| C11B | 0.0587 (11) | 0.0580 (10) | 0.0537 (9) | −0.0044 (8) | 0.0174 (8) | −0.0079 (8) |
| C10B | 0.0556 (11) | 0.0672 (11) | 0.0557 (10) | −0.0018 (8) | 0.0041 (8) | −0.0068 (8) |
| C1B | 0.0866 (15) | 0.0621 (11) | 0.0799 (13) | −0.0109 (10) | 0.0070 (12) | −0.0092 (10) |
| C2B | 0.0880 (15) | 0.0808 (13) | 0.0711 (12) | 0.0114 (11) | 0.0326 (12) | −0.0039 (10) |
| C12B | 0.0895 (16) | 0.0570 (11) | 0.0872 (14) | −0.0067 (10) | 0.0246 (12) | −0.0075 (10) |
| O5A | 0.0561 (7) | 0.0374 (5) | 0.0592 (7) | 0.0039 (4) | 0.0061 (5) | 0.0076 (5) |
| O2A | 0.0550 (7) | 0.0492 (6) | 0.0600 (7) | 0.0048 (5) | 0.0018 (5) | 0.0103 (5) |
| O3A | 0.0549 (7) | 0.0477 (6) | 0.0712 (8) | −0.0089 (5) | 0.0001 (6) | 0.0026 (5) |
| C5A | 0.0480 (9) | 0.0354 (7) | 0.0479 (8) | 0.0017 (6) | 0.0090 (7) | 0.0018 (6) |
| O1A | 0.0849 (9) | 0.0341 (5) | 0.0708 (8) | 0.0066 (5) | −0.0116 (7) | 0.0015 (5) |
| C8A | 0.0480 (9) | 0.0367 (7) | 0.0473 (8) | 0.0040 (6) | 0.0092 (7) | 0.0059 (6) |
| C7A | 0.0463 (9) | 0.0392 (7) | 0.0506 (8) | −0.0023 (6) | 0.0073 (7) | −0.0013 (6) |
| C4A | 0.0493 (9) | 0.0410 (8) | 0.0469 (8) | 0.0027 (6) | 0.0113 (7) | 0.0024 (6) |
| C6A | 0.0624 (11) | 0.0376 (8) | 0.0660 (11) | 0.0023 (7) | −0.0038 (9) | 0.0035 (7) |
| O4A | 0.0940 (11) | 0.0423 (6) | 0.1015 (11) | −0.0076 (6) | −0.0370 (9) | 0.0016 (7) |
| C11A | 0.0673 (11) | 0.0376 (7) | 0.0568 (9) | 0.0069 (7) | 0.0209 (9) | 0.0080 (7) |
| C9A | 0.0588 (10) | 0.0407 (8) | 0.0623 (10) | −0.0016 (7) | 0.0094 (8) | 0.0012 (7) |
| C3A | 0.0724 (12) | 0.0395 (8) | 0.0562 (10) | 0.0010 (7) | 0.0018 (9) | 0.0059 (7) |
| C10A | 0.0763 (13) | 0.0325 (7) | 0.0738 (11) | −0.0008 (7) | 0.0185 (10) | 0.0026 (7) |
| C2A | 0.1048 (18) | 0.0537 (11) | 0.0846 (14) | 0.0204 (10) | −0.0177 (12) | 0.0118 (10) |
| C12A | 0.0846 (14) | 0.0530 (10) | 0.0762 (12) | 0.0200 (9) | 0.0180 (11) | 0.0194 (9) |
| C1A | 0.1165 (19) | 0.0727 (13) | 0.0917 (15) | −0.0048 (12) | 0.0447 (15) | 0.0214 (12) |
| O2B—C4B | 1.348 (2) | O5A—C11A | 1.3542 (17) |
| O2B—C3B | 1.433 (2) | O5A—C8A | 1.3851 (18) |
| O5B—C11B | 1.351 (2) | O2A—C4A | 1.3662 (18) |
| O5B—C8B | 1.3914 (17) | O2A—C3A | 1.425 (2) |
| O1B—C6B | 1.354 (2) | O3A—C4A | 1.1985 (19) |
| O1B—C3B | 1.428 (2) | C5A—C7A | 1.358 (2) |
| C5B—C7B | 1.358 (2) | C5A—C4A | 1.452 (2) |
| C5B—C6B | 1.460 (2) | C5A—C6A | 1.467 (2) |
| C5B—C4B | 1.467 (2) | O1A—C6A | 1.3545 (19) |
| O3B—C4B | 1.2070 (19) | O1A—C3A | 1.431 (2) |
| O4B—C6B | 1.202 (2) | C8A—C9A | 1.364 (2) |
| C7B—C8B | 1.408 (2) | C8A—C7A | 1.4056 (19) |
| C7B—H7BA | 0.9300 | C7A—H7AA | 0.9300 |
| C8B—C9B | 1.366 (2) | C6A—O4A | 1.194 (2) |
| C9B—C10B | 1.391 (2) | C11A—C10A | 1.344 (3) |
| C9B—H9BA | 0.9300 | C11A—C12A | 1.481 (2) |
| C3B—C2B | 1.499 (3) | C9A—C10A | 1.399 (2) |
| C3B—C1B | 1.502 (2) | C9A—H9AA | 0.9300 |
| C11B—C10B | 1.354 (2) | C3A—C1A | 1.491 (3) |
| C11B—C12B | 1.480 (2) | C3A—C2A | 1.514 (2) |
| C10B—H10A | 0.9300 | C10A—H10B | 0.9300 |
| C1B—H1BA | 0.9600 | C2A—H2AA | 0.9600 |
| C1B—H1BB | 0.9600 | C2A—H2AB | 0.9600 |
| C1B—H1BC | 0.9600 | C2A—H2AC | 0.9600 |
| C2B—H2BA | 0.9600 | C12A—H12D | 0.9600 |
| C2B—H2BB | 0.9600 | C12A—H12E | 0.9600 |
| C2B—H2BC | 0.9600 | C12A—H12F | 0.9600 |
| C12B—H12A | 0.9600 | C1A—H1AA | 0.9600 |
| C12B—H12B | 0.9600 | C1A—H1AB | 0.9600 |
| C12B—H12C | 0.9600 | C1A—H1AC | 0.9600 |
| C4B—O2B—C3B | 118.43 (13) | C11A—O5A—C8A | 107.77 (13) |
| C11B—O5B—C8B | 107.37 (13) | C4A—O2A—C3A | 118.26 (13) |
| C6B—O1B—C3B | 119.91 (13) | C7A—C5A—C4A | 125.38 (14) |
| C7B—C5B—C6B | 124.95 (15) | C7A—C5A—C6A | 115.42 (15) |
| C7B—C5B—C4B | 116.48 (14) | C4A—C5A—C6A | 119.16 (13) |
| C6B—C5B—C4B | 118.43 (15) | C6A—O1A—C3A | 119.26 (12) |
| O4B—C6B—O1B | 116.99 (15) | C9A—C8A—O5A | 108.02 (13) |
| O4B—C6B—C5B | 126.11 (16) | C9A—C8A—C7A | 139.38 (15) |
| O1B—C6B—C5B | 116.81 (14) | O5A—C8A—C7A | 112.60 (13) |
| C5B—C7B—C8B | 133.72 (14) | C5A—C7A—C8A | 134.05 (16) |
| C5B—C7B—H7BA | 113.1 | C5A—C7A—H7AA | 113.0 |
| C8B—C7B—H7BA | 113.1 | C8A—C7A—H7AA | 113.0 |
| O3B—C4B—O2B | 118.18 (16) | O3A—C4A—O2A | 117.16 (15) |
| O3B—C4B—C5B | 124.96 (16) | O3A—C4A—C5A | 126.53 (14) |
| O2B—C4B—C5B | 116.81 (14) | O2A—C4A—C5A | 116.19 (13) |
| C9B—C8B—O5B | 107.91 (15) | O4A—C6A—O1A | 117.49 (15) |
| C9B—C8B—C7B | 138.86 (15) | O4A—C6A—C5A | 125.89 (14) |
| O5B—C8B—C7B | 113.20 (13) | O1A—C6A—C5A | 116.55 (15) |
| C8B—C9B—C10B | 107.48 (16) | C10A—C11A—O5A | 109.20 (14) |
| C8B—C9B—H9BA | 126.3 | C10A—C11A—C12A | 133.71 (15) |
| C10B—C9B—H9BA | 126.3 | O5A—C11A—C12A | 117.09 (16) |
| O1B—C3B—O2B | 110.13 (13) | C8A—C9A—C10A | 106.92 (16) |
| O1B—C3B—C2B | 110.27 (16) | C8A—C9A—H9AA | 126.5 |
| O2B—C3B—C2B | 109.85 (15) | C10A—C9A—H9AA | 126.5 |
| O1B—C3B—C1B | 105.73 (14) | O2A—C3A—O1A | 109.72 (13) |
| O2B—C3B—C1B | 106.35 (16) | O2A—C3A—C1A | 110.21 (15) |
| C2B—C3B—C1B | 114.36 (16) | O1A—C3A—C1A | 110.72 (17) |
| O5B—C11B—C10B | 109.69 (15) | O2A—C3A—C2A | 106.18 (16) |
| O5B—C11B—C12B | 116.80 (16) | O1A—C3A—C2A | 105.14 (14) |
| C10B—C11B—C12B | 133.51 (18) | C1A—C3A—C2A | 114.63 (17) |
| C11B—C10B—C9B | 107.55 (17) | C11A—C10A—C9A | 108.08 (15) |
| C11B—C10B—H10A | 126.2 | C11A—C10A—H10B | 126.0 |
| C9B—C10B—H10A | 126.2 | C9A—C10A—H10B | 126.0 |
| C3B—C1B—H1BA | 109.5 | C3A—C2A—H2AA | 109.5 |
| C3B—C1B—H1BB | 109.5 | C3A—C2A—H2AB | 109.5 |
| H1BA—C1B—H1BB | 109.5 | H2AA—C2A—H2AB | 109.5 |
| C3B—C1B—H1BC | 109.5 | C3A—C2A—H2AC | 109.5 |
| H1BA—C1B—H1BC | 109.5 | H2AA—C2A—H2AC | 109.5 |
| H1BB—C1B—H1BC | 109.5 | H2AB—C2A—H2AC | 109.5 |
| C3B—C2B—H2BA | 109.5 | C11A—C12A—H12D | 109.5 |
| C3B—C2B—H2BB | 109.5 | C11A—C12A—H12E | 109.5 |
| H2BA—C2B—H2BB | 109.5 | H12D—C12A—H12E | 109.5 |
| C3B—C2B—H2BC | 109.5 | C11A—C12A—H12F | 109.5 |
| H2BA—C2B—H2BC | 109.5 | H12D—C12A—H12F | 109.5 |
| H2BB—C2B—H2BC | 109.5 | H12E—C12A—H12F | 109.5 |
| C11B—C12B—H12A | 109.5 | C3A—C1A—H1AA | 109.5 |
| C11B—C12B—H12B | 109.5 | C3A—C1A—H1AB | 109.5 |
| H12A—C12B—H12B | 109.5 | H1AA—C1A—H1AB | 109.5 |
| C11B—C12B—H12C | 109.5 | C3A—C1A—H1AC | 109.5 |
| H12A—C12B—H12C | 109.5 | H1AA—C1A—H1AC | 109.5 |
| H12B—C12B—H12C | 109.5 | H1AB—C1A—H1AC | 109.5 |
| H··· | ||||
| C1B—H1BC···O3Bi | 0.96 | 2.48 | 3.434 (3) | 170 |
| C10B—H10A···O4Aii | 0.93 | 2.60 | 3.448 (3) | 153 |
| C10A—H10B···O1Aiii | 0.93 | 2.44 | 3.343 (2) | 163 |
| C2A—H2AB···O2Aiv | 0.96 | 2.57 | 3.524 (3) | 170 |
| C1A—H1AA···O3B | 0.96 | 2.55 | 3.496 (3) | 170 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C1 | 0.96 | 2.48 | 3.434 (3) | 170 |
| C10 | 0.93 | 2.60 | 3.448 (3) | 153 |
| C10 | 0.93 | 2.44 | 3.343 (2) | 163 |
| C2 | 0.96 | 2.57 | 3.524 (3) | 170 |
| C1 | 0.96 | 2.55 | 3.496 (3) | 170 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .