| Literature DB >> 21588618 |
Ching Kheng Quah1, Madhukar Hemamalini, Hoong-Kun Fun.
Abstract
In the title compound, C(6)H(9)N(2) (+)·C(7)H(5)O(3) (-), the protonated 2-amino-5-methyl-pyridinium cation and the 2-hy-droxy-benzoate anion are both essentially planar, with maximum deviations of 0.026 (2) and 0.034 (1) Å, respectively. The anion is stabilized by an intra-molecular O-H⋯O hydrogen bond, which forms an S(6) ring motif. In the solid state, the anions are linked to the cations via pairs of inter-molecular N-H⋯O hydrogen bonds forming R(2) (2)(8) ring motifs. The crystal structure is further stabilized by N-H⋯O and C-H⋯O inter-actions which link the mol-ecules into chains along [010]. A π-π stacking inter-action [centroid-centroid-distance = 3.740 (2) Å] is also observed.Entities:
Year: 2010 PMID: 21588618 PMCID: PMC3008107 DOI: 10.1107/S1600536810030928
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H9N2+·C7H5O3− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3026 reflections |
| θ = 3.2–26.8° | |
| µ = 0.09 mm−1 | |
| β = 104.668 (11)° | Block, yellow |
| 0.42 × 0.19 × 0.10 mm | |
| Bruker SMART APEXII DUO CCD area-detector diffractometer | 3797 independent reflections |
| Radiation source: fine-focus sealed tube | 2233 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.0°, θmin = 2.9° |
| Absorption correction: multi-scan ( | |
| 14312 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 3797 reflections | (Δ/σ)max < 0.001 |
| 219 parameters | Δρmax = 0.14 e Å−3 |
| 0 restraints | Δρmin = −0.15 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.25056 (7) | 0.79968 (17) | 0.30963 (8) | 0.0491 (3) | |
| N2 | 0.07534 (9) | 0.7373 (2) | 0.28908 (10) | 0.0664 (4) | |
| C1 | 0.15649 (8) | 0.84904 (19) | 0.32288 (9) | 0.0485 (3) | |
| C2 | 0.15072 (10) | 1.0168 (2) | 0.37198 (9) | 0.0542 (3) | |
| C3 | 0.23752 (10) | 1.1242 (2) | 0.40264 (10) | 0.0561 (3) | |
| C4 | 0.33511 (10) | 1.0709 (2) | 0.38749 (9) | 0.0544 (3) | |
| C5 | 0.33759 (9) | 0.9075 (2) | 0.34103 (9) | 0.0523 (3) | |
| C6 | 0.43050 (14) | 1.1912 (3) | 0.41915 (16) | 0.0791 (5) | |
| O1 | 0.40974 (7) | 0.27586 (19) | 0.17167 (9) | 0.0806 (4) | |
| O2 | 0.10956 (7) | 0.41138 (14) | 0.18462 (8) | 0.0703 (3) | |
| O3 | 0.27788 (7) | 0.48394 (15) | 0.21915 (9) | 0.0710 (3) | |
| C7 | 0.32912 (10) | 0.1574 (2) | 0.13606 (10) | 0.0581 (4) | |
| C8 | 0.35051 (15) | −0.0109 (3) | 0.09641 (12) | 0.0760 (5) | |
| C9 | 0.27204 (17) | −0.1348 (3) | 0.05976 (13) | 0.0830 (5) | |
| C10 | 0.17009 (17) | −0.0959 (3) | 0.06012 (13) | 0.0799 (5) | |
| C11 | 0.14807 (12) | 0.0712 (2) | 0.09921 (11) | 0.0635 (4) | |
| C12 | 0.22624 (9) | 0.19952 (19) | 0.13827 (9) | 0.0494 (3) | |
| C13 | 0.20156 (9) | 0.37630 (19) | 0.18311 (10) | 0.0529 (3) | |
| H2A | 0.0850 (11) | 1.050 (2) | 0.3827 (10) | 0.067 (4)* | |
| H3A | 0.2348 (12) | 1.246 (3) | 0.4373 (11) | 0.074 (5)* | |
| H5A | 0.3970 (10) | 0.854 (2) | 0.3237 (9) | 0.053 (3)* | |
| H6A | 0.4887 (16) | 1.146 (3) | 0.3935 (14) | 0.107 (7)* | |
| H6B | 0.4150 (17) | 1.318 (4) | 0.3879 (17) | 0.131 (9)* | |
| H6C | 0.4491 (16) | 1.208 (3) | 0.4862 (19) | 0.123 (8)* | |
| H8A | 0.4216 (15) | −0.033 (3) | 0.1009 (13) | 0.097 (6)* | |
| H9A | 0.2895 (14) | −0.256 (3) | 0.0343 (13) | 0.098 (6)* | |
| H10A | 0.1156 (15) | −0.181 (3) | 0.0375 (14) | 0.102 (6)* | |
| H11A | 0.0773 (12) | 0.101 (2) | 0.1003 (10) | 0.068 (4)* | |
| H1N1 | 0.2564 (11) | 0.678 (3) | 0.2733 (11) | 0.073 (4)* | |
| H1N2 | 0.0141 (13) | 0.771 (2) | 0.2980 (12) | 0.078 (5)* | |
| H2N2 | 0.0862 (13) | 0.626 (3) | 0.2540 (13) | 0.087 (5)* | |
| H1O1 | 0.3730 (16) | 0.382 (3) | 0.1984 (15) | 0.116 (7)* |
| N1 | 0.0397 (5) | 0.0494 (7) | 0.0589 (6) | 0.0009 (5) | 0.0137 (4) | −0.0009 (5) |
| N2 | 0.0401 (5) | 0.0620 (9) | 0.0988 (9) | −0.0039 (5) | 0.0209 (6) | −0.0157 (7) |
| C1 | 0.0396 (5) | 0.0504 (8) | 0.0560 (7) | 0.0017 (5) | 0.0131 (5) | 0.0018 (6) |
| C2 | 0.0480 (6) | 0.0565 (9) | 0.0592 (7) | 0.0039 (6) | 0.0158 (6) | −0.0028 (6) |
| C3 | 0.0614 (7) | 0.0537 (9) | 0.0520 (7) | −0.0011 (7) | 0.0121 (6) | −0.0041 (7) |
| C4 | 0.0524 (7) | 0.0579 (9) | 0.0508 (7) | −0.0090 (6) | 0.0092 (5) | 0.0044 (6) |
| C5 | 0.0401 (6) | 0.0607 (9) | 0.0574 (7) | −0.0017 (6) | 0.0143 (5) | 0.0045 (7) |
| C6 | 0.0653 (9) | 0.0833 (14) | 0.0848 (12) | −0.0264 (10) | 0.0118 (9) | −0.0071 (11) |
| O1 | 0.0495 (5) | 0.0882 (9) | 0.1105 (9) | 0.0064 (5) | 0.0323 (5) | −0.0146 (7) |
| O2 | 0.0473 (5) | 0.0544 (7) | 0.1169 (8) | 0.0028 (4) | 0.0349 (5) | −0.0095 (6) |
| O3 | 0.0502 (5) | 0.0530 (6) | 0.1159 (8) | −0.0031 (5) | 0.0324 (5) | −0.0166 (6) |
| C7 | 0.0549 (7) | 0.0635 (10) | 0.0597 (7) | 0.0154 (7) | 0.0216 (6) | 0.0049 (7) |
| C8 | 0.0784 (10) | 0.0775 (13) | 0.0775 (10) | 0.0292 (10) | 0.0297 (8) | −0.0028 (9) |
| C9 | 0.1128 (15) | 0.0655 (12) | 0.0739 (10) | 0.0248 (11) | 0.0296 (10) | −0.0121 (9) |
| C10 | 0.0967 (13) | 0.0645 (12) | 0.0772 (11) | −0.0022 (10) | 0.0198 (9) | −0.0197 (9) |
| C11 | 0.0634 (8) | 0.0604 (10) | 0.0672 (9) | 0.0032 (7) | 0.0177 (7) | −0.0063 (7) |
| C12 | 0.0505 (6) | 0.0480 (8) | 0.0521 (6) | 0.0086 (6) | 0.0176 (5) | 0.0059 (6) |
| C13 | 0.0471 (6) | 0.0451 (8) | 0.0719 (8) | 0.0040 (6) | 0.0252 (6) | 0.0047 (7) |
| N1—C1 | 1.3510 (15) | C6—H6C | 0.94 (3) |
| N1—C5 | 1.3638 (17) | O1—C7 | 1.3567 (19) |
| N1—H1N1 | 1.030 (18) | O1—H1O1 | 1.03 (2) |
| N2—C1 | 1.3279 (18) | O2—C13 | 1.2467 (15) |
| N2—H1N2 | 0.884 (18) | O3—C13 | 1.2710 (16) |
| N2—H2N2 | 0.97 (2) | C7—C8 | 1.393 (2) |
| C1—C2 | 1.405 (2) | C7—C12 | 1.4006 (18) |
| C2—C3 | 1.359 (2) | C8—C9 | 1.365 (3) |
| C2—H2A | 0.950 (15) | C8—H8A | 0.938 (19) |
| C3—C4 | 1.413 (2) | C9—C10 | 1.377 (3) |
| C3—H3A | 1.011 (18) | C9—H9A | 0.99 (2) |
| C4—C5 | 1.352 (2) | C10—C11 | 1.384 (2) |
| C4—C6 | 1.500 (2) | C10—H10A | 0.94 (2) |
| C5—H5A | 0.960 (13) | C11—C12 | 1.391 (2) |
| C6—H6A | 0.99 (2) | C11—H11A | 0.962 (15) |
| C6—H6B | 1.01 (3) | C12—C13 | 1.494 (2) |
| C1—N1—C5 | 122.26 (13) | H6A—C6—H6C | 113.4 (17) |
| C1—N1—H1N1 | 118.8 (8) | H6B—C6—H6C | 108 (2) |
| C5—N1—H1N1 | 118.9 (8) | C7—O1—H1O1 | 101.7 (11) |
| C1—N2—H1N2 | 117.6 (11) | O1—C7—C8 | 118.34 (13) |
| C1—N2—H2N2 | 118.2 (10) | O1—C7—C12 | 122.04 (13) |
| H1N2—N2—H2N2 | 124.1 (15) | C8—C7—C12 | 119.62 (15) |
| N2—C1—N1 | 118.50 (13) | C9—C8—C7 | 120.52 (16) |
| N2—C1—C2 | 123.91 (12) | C9—C8—H8A | 124.5 (13) |
| N1—C1—C2 | 117.58 (11) | C7—C8—H8A | 114.8 (13) |
| C3—C2—C1 | 119.91 (12) | C8—C9—C10 | 121.02 (18) |
| C3—C2—H2A | 122.5 (9) | C8—C9—H9A | 119.2 (11) |
| C1—C2—H2A | 117.6 (9) | C10—C9—H9A | 119.8 (11) |
| C2—C3—C4 | 121.70 (14) | C9—C10—C11 | 118.87 (18) |
| C2—C3—H3A | 121.2 (9) | C9—C10—H10A | 122.2 (13) |
| C4—C3—H3A | 117.1 (9) | C11—C10—H10A | 118.9 (13) |
| C5—C4—C3 | 116.52 (12) | C10—C11—C12 | 121.65 (15) |
| C5—C4—C6 | 121.61 (14) | C10—C11—H11A | 120.0 (10) |
| C3—C4—C6 | 121.86 (16) | C12—C11—H11A | 118.3 (9) |
| C4—C5—N1 | 122.02 (12) | C11—C12—C7 | 118.32 (13) |
| C4—C5—H5A | 126.5 (8) | C11—C12—C13 | 120.92 (12) |
| N1—C5—H5A | 111.4 (8) | C7—C12—C13 | 120.75 (12) |
| C4—C6—H6A | 111.8 (13) | O2—C13—O3 | 123.17 (13) |
| C4—C6—H6B | 108.9 (13) | O2—C13—C12 | 119.90 (12) |
| H6A—C6—H6B | 102.8 (18) | O3—C13—C12 | 116.93 (11) |
| C4—C6—H6C | 111.5 (14) | ||
| C5—N1—C1—N2 | 179.21 (12) | C8—C9—C10—C11 | −0.5 (3) |
| C5—N1—C1—C2 | −0.82 (18) | C9—C10—C11—C12 | −0.3 (3) |
| N2—C1—C2—C3 | −178.87 (13) | C10—C11—C12—C7 | 1.0 (2) |
| N1—C1—C2—C3 | 1.16 (19) | C10—C11—C12—C13 | −177.95 (14) |
| C1—C2—C3—C4 | −0.7 (2) | O1—C7—C12—C11 | 179.29 (13) |
| C2—C3—C4—C5 | −0.1 (2) | C8—C7—C12—C11 | −0.8 (2) |
| C2—C3—C4—C6 | 178.54 (15) | O1—C7—C12—C13 | −1.8 (2) |
| C3—C4—C5—N1 | 0.46 (19) | C8—C7—C12—C13 | 178.09 (13) |
| C6—C4—C5—N1 | −178.17 (14) | C11—C12—C13—O2 | −1.0 (2) |
| C1—N1—C5—C4 | 0.00 (19) | C7—C12—C13—O2 | −179.86 (12) |
| O1—C7—C8—C9 | 179.92 (15) | C11—C12—C13—O3 | 178.39 (13) |
| C12—C7—C8—C9 | 0.0 (2) | C7—C12—C13—O3 | −0.49 (19) |
| C7—C8—C9—C10 | 0.7 (3) |
| H··· | ||||
| N1—H1N1···O3 | 1.03 (2) | 1.65 (2) | 2.678 (2) | 174.6 (13) |
| N2—H1N2···O2i | 0.884 (18) | 1.987 (17) | 2.852 (2) | 165.4 (14) |
| N2—H2N2···O2 | 0.97 (2) | 1.90 (2) | 2.872 (2) | 179 (2) |
| O1—H1O1···O3 | 1.03 (2) | 1.55 (2) | 2.515 (2) | 155 (2) |
| C5—H5A···O1ii | 0.961 (14) | 2.598 (14) | 3.518 (3) | 160.2 (10) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 1.03 (2) | 1.65 (2) | 2.678 (2) | 174.6 (13) |
| N2—H1 | 0.884 (18) | 1.987 (17) | 2.852 (2) | 165.4 (14) |
| N2—H2 | 0.97 (2) | 1.90 (2) | 2.872 (2) | 179 (2) |
| O1—H1 | 1.03 (2) | 1.55 (2) | 2.515 (2) | 155 (2) |
| C5—H5 | 0.961 (14) | 2.598 (14) | 3.518 (3) | 160.2 (10) |
Symmetry codes: (i) ; (ii) .