Literature DB >> 21588301

3-Ethyl-sulfinyl-2-(4-iodo-phen-yl)-5-methyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(17)H(15)IO(2)S, the 4-iodo-phenyl ring makes a dihedral angle of 35.39 (8)° with the plane of the benzofuran fragment. In the crystal, mol-ecules are linked by inter-molecular C-H⋯O and C-H⋯π inter-actions, and an I⋯O contact [3.378 (2) Å]. The crystal structure also exhibits aromatic π-π inter-actions between the benzene rings of neighbouring mol-ecules [centroid-centroid distance = 3.495 (3) Å].

Entities:  

Year:  2010        PMID: 21588301      PMCID: PMC3007479          DOI: 10.1107/S1600536810026620

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2006 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For the structures of related 3-ethyl­sulfinyl-5-halo-2-(4-halophen­yl)-1-benzofuran derivatives, see: Choi et al. (2010 ▶). For a review of halogen bonding, see: Politzer et al. (2007 ▶).

Experimental

Crystal data

C17H15IO2S M = 410.25 Monoclinic, a = 10.1034 (3) Å b = 13.1942 (4) Å c = 11.9933 (3) Å β = 92.634 (1)° V = 1597.09 (8) Å3 Z = 4 Mo Kα radiation μ = 2.14 mm−1 T = 173 K 0.32 × 0.27 × 0.09 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.551, T max = 0.834 15129 measured reflections 3667 independent reflections 3366 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.069 S = 1.07 3667 reflections 192 parameters H-atom parameters constrained Δρmax = 0.96 e Å−3 Δρmin = −0.69 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810026620/bg2357sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810026620/bg2357Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H15IO2SF(000) = 808
Mr = 410.25Dx = 1.706 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 9921 reflections
a = 10.1034 (3) Åθ = 2.3–27.5°
b = 13.1942 (4) ŵ = 2.14 mm1
c = 11.9933 (3) ÅT = 173 K
β = 92.634 (1)°Block, colourless
V = 1597.09 (8) Å30.32 × 0.27 × 0.09 mm
Z = 4
Bruker SMART APEXII CCD diffractometer3667 independent reflections
Radiation source: rotating anode3366 reflections with I > 2σ(I)
graphite multilayerRint = 0.025
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 2.3°
φ and ω scansh = −8→13
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −17→10
Tmin = 0.551, Tmax = 0.834l = −15→15
15129 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026Hydrogen site location: difference Fourier map
wR(F2) = 0.069H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0328P)2 + 1.5593P] where P = (Fo2 + 2Fc2)/3
3667 reflections(Δ/σ)max = 0.001
192 parametersΔρmax = 0.96 e Å3
0 restraintsΔρmin = −0.69 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I0.491732 (16)0.129285 (13)1.209790 (12)0.03433 (7)
S0.44476 (6)0.12571 (4)0.57565 (5)0.02928 (13)
O20.5466 (2)0.12728 (14)0.48973 (19)0.0451 (5)
O10.36148 (16)0.39156 (12)0.71054 (13)0.0269 (3)
C10.4080 (2)0.25304 (17)0.60955 (18)0.0254 (4)
C20.3800 (2)0.33516 (18)0.53236 (19)0.0253 (4)
C30.3795 (2)0.34768 (18)0.41673 (19)0.0281 (5)
H30.39640.29310.37040.034*
C40.3531 (2)0.44313 (19)0.3722 (2)0.0292 (5)
C50.3273 (2)0.52457 (18)0.4432 (2)0.0300 (5)
H50.31080.58810.41200.036*
C60.3253 (2)0.51387 (18)0.5580 (2)0.0290 (5)
H60.30680.56800.60450.035*
C70.3525 (2)0.41812 (17)0.59933 (18)0.0253 (4)
C80.3968 (2)0.29066 (17)0.71460 (18)0.0255 (4)
C90.4144 (2)0.24931 (17)0.82760 (18)0.0261 (4)
C100.5115 (2)0.1770 (2)0.85308 (19)0.0309 (5)
H100.56330.15250.79690.037*
C110.5319 (3)0.14090 (19)0.9612 (2)0.0315 (5)
H110.59660.09230.97750.038*
C120.4547 (2)0.17826 (18)1.04487 (18)0.0276 (5)
C130.3559 (2)0.24893 (18)1.02076 (19)0.0288 (5)
H130.30340.27251.07690.035*
C140.3359 (2)0.28432 (18)0.91224 (19)0.0283 (5)
H140.26970.33170.89590.034*
C150.3528 (3)0.4598 (2)0.2475 (2)0.0384 (6)
H15A0.41240.41270.21510.058*
H15B0.38100.52780.23260.058*
H15C0.26490.44960.21560.058*
C160.2900 (3)0.0929 (2)0.5052 (2)0.0372 (6)
H16A0.27040.14190.44650.045*
H16B0.29840.02700.47050.045*
C170.1766 (3)0.0902 (2)0.5821 (3)0.0486 (7)
H17A0.19750.04460.64280.073*
H17B0.09810.06730.54170.073*
H17C0.16200.15690.61090.073*
U11U22U33U12U13U23
I0.03738 (11)0.04108 (12)0.02435 (9)0.00488 (7)−0.00062 (7)0.00094 (6)
S0.0299 (3)0.0259 (3)0.0322 (3)0.0037 (2)0.0021 (2)−0.0051 (2)
O20.0406 (11)0.0417 (11)0.0547 (13)0.0043 (8)0.0192 (10)−0.0043 (9)
O10.0306 (8)0.0241 (8)0.0258 (8)0.0025 (6)−0.0021 (6)−0.0040 (6)
C10.0272 (11)0.0226 (11)0.0264 (10)0.0002 (8)0.0006 (8)−0.0023 (8)
C20.0228 (10)0.0249 (11)0.0283 (11)−0.0021 (9)0.0007 (8)−0.0019 (9)
C30.0284 (11)0.0286 (11)0.0275 (11)−0.0032 (9)0.0035 (9)−0.0028 (9)
C40.0242 (11)0.0340 (12)0.0294 (11)−0.0053 (9)0.0023 (9)0.0032 (9)
C50.0259 (11)0.0265 (11)0.0373 (12)−0.0018 (9)−0.0010 (9)0.0042 (9)
C60.0267 (11)0.0257 (11)0.0344 (12)0.0002 (9)−0.0014 (9)−0.0040 (9)
C70.0235 (10)0.0271 (11)0.0253 (10)−0.0013 (9)−0.0010 (8)−0.0028 (8)
C80.0243 (10)0.0242 (11)0.0278 (10)0.0020 (8)−0.0005 (8)−0.0027 (8)
C90.0260 (11)0.0277 (11)0.0244 (10)0.0001 (9)−0.0017 (8)−0.0032 (8)
C100.0283 (12)0.0400 (14)0.0244 (10)0.0086 (10)0.0020 (9)−0.0033 (9)
C110.0288 (12)0.0362 (13)0.0290 (11)0.0079 (10)−0.0031 (9)−0.0034 (9)
C120.0293 (11)0.0298 (12)0.0234 (10)−0.0015 (9)−0.0014 (9)−0.0037 (9)
C130.0308 (12)0.0295 (12)0.0265 (11)0.0034 (9)0.0035 (9)−0.0048 (9)
C140.0280 (11)0.0258 (11)0.0310 (11)0.0049 (9)−0.0002 (9)−0.0032 (9)
C150.0434 (15)0.0424 (15)0.0298 (12)−0.0048 (12)0.0044 (10)0.0068 (11)
C160.0397 (14)0.0326 (13)0.0392 (13)−0.0019 (11)−0.0007 (11)−0.0048 (11)
C170.0383 (15)0.0398 (15)0.068 (2)−0.0042 (12)0.0118 (14)−0.0039 (14)
I—C122.098 (2)C9—C101.392 (3)
I—O2i3.378 (2)C9—C141.395 (3)
S—O21.490 (2)C10—C111.388 (3)
S—C11.772 (2)C10—H100.9300
S—C161.796 (3)C11—C121.390 (3)
O1—C71.378 (3)C11—H110.9300
O1—C81.379 (3)C12—C131.386 (3)
C1—C81.364 (3)C13—C141.389 (3)
C1—C21.445 (3)C13—H130.9300
C2—C71.393 (3)C14—H140.9300
C2—C31.396 (3)C15—H15A0.9600
C3—C41.389 (3)C15—H15B0.9600
C3—H30.9300C15—H15C0.9600
C4—C51.402 (3)C16—C171.503 (4)
C4—C151.513 (3)C16—H16A0.9700
C5—C61.386 (3)C16—H16B0.9700
C5—H50.9300C17—H17A0.9600
C6—C71.380 (3)C17—H17B0.9600
C6—H60.9300C17—H17C0.9600
C8—C91.464 (3)
C12—I—O2i162.46 (7)C11—C10—H10119.6
O2—S—C1107.71 (11)C9—C10—H10119.6
O2—S—C16107.00 (13)C10—C11—C12119.3 (2)
C1—S—C1698.58 (12)C10—C11—H11120.4
C7—O1—C8106.57 (17)C12—C11—H11120.4
C8—C1—C2107.27 (19)C13—C12—C11120.7 (2)
C8—C1—S125.75 (18)C13—C12—I119.95 (16)
C2—C1—S126.94 (17)C11—C12—I119.34 (18)
C7—C2—C3119.2 (2)C12—C13—C14119.6 (2)
C7—C2—C1104.97 (19)C12—C13—H13120.2
C3—C2—C1135.8 (2)C14—C13—H13120.2
C4—C3—C2118.7 (2)C13—C14—C9120.5 (2)
C4—C3—H3120.6C13—C14—H14119.8
C2—C3—H3120.6C9—C14—H14119.8
C3—C4—C5120.0 (2)C4—C15—H15A109.5
C3—C4—C15120.3 (2)C4—C15—H15B109.5
C5—C4—C15119.8 (2)H15A—C15—H15B109.5
C6—C5—C4122.4 (2)C4—C15—H15C109.5
C6—C5—H5118.8H15A—C15—H15C109.5
C4—C5—H5118.8H15B—C15—H15C109.5
C7—C6—C5116.0 (2)C17—C16—S112.9 (2)
C7—C6—H6122.0C17—C16—H16A109.0
C5—C6—H6122.0S—C16—H16A109.0
O1—C7—C6125.7 (2)C17—C16—H16B109.0
O1—C7—C2110.6 (2)S—C16—H16B109.0
C6—C7—C2123.6 (2)H16A—C16—H16B107.8
C1—C8—O1110.56 (19)C16—C17—H17A109.5
C1—C8—C9135.1 (2)C16—C17—H17B109.5
O1—C8—C9114.37 (18)H17A—C17—H17B109.5
C10—C9—C14119.0 (2)C16—C17—H17C109.5
C10—C9—C8120.9 (2)H17A—C17—H17C109.5
C14—C9—C8120.1 (2)H17B—C17—H17C109.5
C11—C10—C9120.9 (2)
O2—S—C1—C8−134.9 (2)C2—C1—C8—O10.8 (3)
C16—S—C1—C8114.1 (2)S—C1—C8—O1−177.22 (16)
O2—S—C1—C247.4 (2)C2—C1—C8—C9−178.6 (2)
C16—S—C1—C2−63.6 (2)S—C1—C8—C93.3 (4)
C8—C1—C2—C7−0.4 (3)C7—O1—C8—C1−1.0 (2)
S—C1—C2—C7177.68 (17)C7—O1—C8—C9178.56 (19)
C8—C1—C2—C3177.1 (3)C1—C8—C9—C1034.9 (4)
S—C1—C2—C3−4.8 (4)O1—C8—C9—C10−144.5 (2)
C7—C2—C3—C40.8 (3)C1—C8—C9—C14−146.9 (3)
C1—C2—C3—C4−176.4 (2)O1—C8—C9—C1433.7 (3)
C2—C3—C4—C5−0.2 (3)C14—C9—C10—C11−1.0 (4)
C2—C3—C4—C15179.5 (2)C8—C9—C10—C11177.2 (2)
C3—C4—C5—C6−0.7 (4)C9—C10—C11—C12−0.4 (4)
C15—C4—C5—C6179.6 (2)C10—C11—C12—C131.6 (4)
C4—C5—C6—C71.0 (3)C10—C11—C12—I−176.97 (19)
C8—O1—C7—C6−176.9 (2)C11—C12—C13—C14−1.4 (4)
C8—O1—C7—C20.8 (2)I—C12—C13—C14177.17 (18)
C5—C6—C7—O1177.0 (2)C12—C13—C14—C90.0 (4)
C5—C6—C7—C2−0.3 (3)C10—C9—C14—C131.2 (4)
C3—C2—C7—O1−178.3 (2)C8—C9—C14—C13−177.1 (2)
C1—C2—C7—O1−0.3 (2)O2—S—C16—C17−179.0 (2)
C3—C2—C7—C6−0.6 (4)C1—S—C16—C17−67.5 (2)
C1—C2—C7—C6177.4 (2)
Cg is the centroid of the C2–C7 benzene ring.
D—H···AD—HH···AD···AD—H···A
C16—H16B···O2ii0.972.603.341 (3)134
C11—H11···Cgiii0.932.613.378 (3)141
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C2–C7 benzene ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C16—H16B⋯O2i0.972.603.341 (3)134
C11—H11⋯Cgii0.932.613.378 (3)141

Symmetry codes: (i) ; (ii) .

  9 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  An overview of halogen bonding.

Authors:  Peter Politzer; Pat Lane; Monica C Concha; Yuguang Ma; Jane S Murray
Journal:  J Mol Model       Date:  2006-09-30       Impact factor: 1.810

5.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

6.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

7.  3-Ethyl-sulfinyl-5-fluoro-2-(4-iodo-phen-yl)-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-30

8.  3-Ethyl-sulfinyl-2-(4-fluoro-phen-yl)-5-iodo-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-10

9.  2-(4-Chloro-phen-yl)-3-ethyl-sulfinyl-5-fluoro-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-06
  9 in total
  2 in total

1.  5-Chloro-3-ethyl-sulfinyl-2-(4-iodo-phen-yl)-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-28

2.  5-Chloro-3-ethyl-sulfinyl-2-(4-iodo-phen-yl)-7-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-11
  2 in total

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