Literature DB >> 21580614

2-(4-Chloro-phen-yl)-3-ethyl-sulfinyl-5-fluoro-1-benzofuran.

Hong Dae Choi1, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(16)H(12)ClFO(2)S, the 4-chloro-phenyl ring is rotated out of the benzofuran plane, as indicated by the dihedral angle of 19.79 (8)°. The crystal structure exhibits weak inter-molecular C-H⋯O hydrogen bonds and C-H⋯π inter-actions.

Entities:  

Year:  2010        PMID: 21580614      PMCID: PMC2984045          DOI: 10.1107/S1600536810008172

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 3-ethyl­sulfinyl-2-(4-fluoro­phen­yl)-5-halo-1-benzofuran derivatives, see: Choi et al. (2010 ▶). For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2006 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶).

Experimental

Crystal data

C16H12ClFO2S M = 322.77 Monoclinic, a = 11.5257 (9) Å b = 7.9655 (6) Å c = 16.395 (1) Å β = 106.518 (1)° V = 1443.07 (18) Å3 Z = 4 Mo Kα radiation μ = 0.42 mm−1 T = 173 K 0.40 × 0.35 × 0.35 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.850, T max = 0.867 12345 measured reflections 3290 independent reflections 2713 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.085 S = 1.05 3290 reflections 191 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810008172/bh2275sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810008172/bh2275Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12ClFO2SF(000) = 664
Mr = 322.77Dx = 1.486 Mg m3
Monoclinic, P21/cMelting point = 405–406 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 11.5257 (9) ÅCell parameters from 5508 reflections
b = 7.9655 (6) Åθ = 2.6–27.4°
c = 16.395 (1) ŵ = 0.42 mm1
β = 106.518 (1)°T = 173 K
V = 1443.07 (18) Å3Block, colourless
Z = 40.40 × 0.35 × 0.35 mm
Bruker SMART APEXII CCD diffractometer3290 independent reflections
Radiation source: Rotating Anode2713 reflections with I > 2σ(I)
Bruker HELIOS graded multilayer opticsRint = 0.028
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 1.8°
φ and ω scansh = −14→14
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −10→10
Tmin = 0.850, Tmax = 0.867l = −21→20
12345 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: difference Fourier map
wR(F2) = 0.085H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0338P)2 + 0.7418P] where P = (Fo2 + 2Fc2)/3
3290 reflections(Δ/σ)max < 0.001
191 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.27 e Å3
0 constraints
xyzUiso*/Ueq
Cl1.01429 (4)0.47181 (6)0.72194 (3)0.03651 (13)
S0.37916 (4)0.44605 (5)0.71678 (2)0.02292 (11)
F−0.02836 (9)0.79231 (16)0.49298 (7)0.0447 (3)
O10.45081 (10)0.71492 (14)0.53223 (7)0.0262 (3)
O20.30653 (12)0.54333 (16)0.76279 (8)0.0335 (3)
C10.38345 (15)0.56819 (19)0.62737 (10)0.0228 (3)
C20.28142 (15)0.6562 (2)0.57188 (10)0.0242 (3)
C30.15813 (15)0.6723 (2)0.56551 (11)0.0282 (4)
H30.12310.61780.60280.034*
C40.09200 (16)0.7732 (2)0.50110 (12)0.0321 (4)
C50.13881 (17)0.8572 (2)0.44327 (11)0.0328 (4)
H50.08860.92300.40080.039*
C60.26012 (17)0.8427 (2)0.44906 (11)0.0292 (4)
H60.29420.89690.41120.035*
C70.32842 (15)0.7429 (2)0.51444 (10)0.0249 (3)
C80.48285 (15)0.6093 (2)0.60191 (10)0.0233 (3)
C90.61217 (15)0.5719 (2)0.63190 (10)0.0236 (3)
C100.65770 (15)0.4350 (2)0.68435 (11)0.0262 (4)
H100.60450.36280.70020.031*
C110.78105 (15)0.4052 (2)0.71314 (11)0.0274 (4)
H110.81080.31490.74890.033*
C120.85925 (15)0.5115 (2)0.68801 (11)0.0270 (4)
C130.81697 (16)0.6470 (2)0.63528 (11)0.0308 (4)
H130.87060.71660.61830.037*
C140.69410 (16)0.6776 (2)0.60811 (11)0.0288 (4)
H140.66530.76980.57350.035*
C150.28229 (16)0.2801 (2)0.66061 (11)0.0285 (4)
H15A0.25020.21790.70020.034*
H15B0.21460.32870.61770.034*
C160.3499 (2)0.1613 (2)0.61849 (13)0.0414 (5)
H16A0.38080.22230.57860.062*
H16B0.29590.07500.58910.062*
H16C0.41590.11130.66100.062*
U11U22U33U12U13U23
Cl0.0231 (2)0.0483 (3)0.0378 (3)0.00038 (19)0.00815 (18)−0.0005 (2)
S0.0255 (2)0.0234 (2)0.0200 (2)0.00029 (16)0.00665 (15)0.00033 (15)
F0.0275 (6)0.0575 (8)0.0458 (7)0.0124 (5)0.0052 (5)0.0073 (6)
O10.0286 (6)0.0259 (6)0.0249 (6)0.0006 (5)0.0091 (5)0.0030 (5)
O20.0433 (8)0.0313 (7)0.0311 (7)0.0041 (6)0.0192 (6)−0.0023 (5)
C10.0251 (8)0.0207 (8)0.0223 (8)0.0015 (6)0.0065 (6)0.0010 (6)
C20.0293 (9)0.0213 (8)0.0218 (8)0.0021 (7)0.0072 (7)−0.0013 (6)
C30.0279 (9)0.0302 (9)0.0269 (9)0.0025 (7)0.0085 (7)0.0007 (7)
C40.0275 (9)0.0348 (10)0.0315 (9)0.0059 (8)0.0043 (7)−0.0031 (8)
C50.0400 (11)0.0291 (9)0.0246 (9)0.0081 (8)0.0017 (8)0.0012 (7)
C60.0407 (10)0.0249 (9)0.0218 (8)0.0019 (7)0.0086 (7)0.0001 (7)
C70.0284 (9)0.0226 (8)0.0240 (8)0.0017 (7)0.0077 (7)−0.0024 (6)
C80.0292 (9)0.0191 (8)0.0218 (8)−0.0012 (7)0.0077 (7)−0.0008 (6)
C90.0254 (8)0.0234 (8)0.0227 (8)−0.0014 (6)0.0080 (7)−0.0040 (6)
C100.0264 (9)0.0224 (8)0.0322 (9)−0.0027 (7)0.0123 (7)−0.0007 (7)
C110.0290 (9)0.0233 (8)0.0300 (9)0.0030 (7)0.0086 (7)0.0006 (7)
C120.0221 (8)0.0329 (9)0.0260 (8)−0.0008 (7)0.0070 (7)−0.0068 (7)
C130.0303 (9)0.0343 (10)0.0298 (9)−0.0074 (8)0.0115 (8)0.0017 (8)
C140.0313 (9)0.0293 (9)0.0258 (9)−0.0029 (7)0.0082 (7)0.0037 (7)
C150.0308 (9)0.0234 (8)0.0286 (9)−0.0050 (7)0.0038 (7)0.0005 (7)
C160.0585 (13)0.0296 (10)0.0344 (11)0.0016 (9)0.0105 (9)−0.0066 (8)
Cl—C121.7427 (17)C8—C91.461 (2)
S—O21.4930 (12)C9—C101.395 (2)
S—C11.7717 (16)C9—C141.401 (2)
S—C151.8047 (17)C10—C111.385 (2)
F—C41.364 (2)C10—H100.9300
O1—C71.375 (2)C11—C121.382 (2)
O1—C81.3820 (19)C11—H110.9300
C1—C81.366 (2)C12—C131.382 (2)
C1—C21.447 (2)C13—C141.380 (2)
C2—C71.395 (2)C13—H130.9300
C2—C31.401 (2)C14—H140.9300
C3—C41.373 (2)C15—C161.512 (3)
C3—H30.9300C15—H15A0.9700
C4—C51.389 (3)C15—H15B0.9700
C5—C61.379 (3)C16—H16A0.9600
C5—H50.9300C16—H16B0.9600
C6—C71.386 (2)C16—H16C0.9600
C6—H60.9300
O2—S—C1106.53 (7)C10—C9—C8122.36 (15)
O2—S—C15106.47 (8)C14—C9—C8119.21 (15)
C1—S—C1597.97 (8)C11—C10—C9120.90 (16)
C7—O1—C8106.91 (12)C11—C10—H10119.5
C8—C1—C2107.11 (14)C9—C10—H10119.5
C8—C1—S127.41 (13)C12—C11—C10119.14 (16)
C2—C1—S125.26 (12)C12—C11—H11120.4
C7—C2—C3118.97 (15)C10—C11—H11120.4
C7—C2—C1105.19 (14)C11—C12—C13121.38 (16)
C3—C2—C1135.83 (16)C11—C12—Cl119.38 (14)
C4—C3—C2116.15 (16)C13—C12—Cl119.23 (14)
C4—C3—H3121.9C14—C13—C12119.14 (16)
C2—C3—H3121.9C14—C13—H13120.4
F—C4—C3117.85 (16)C12—C13—H13120.4
F—C4—C5117.48 (16)C13—C14—C9121.00 (16)
C3—C4—C5124.67 (17)C13—C14—H14119.5
C6—C5—C4119.71 (16)C9—C14—H14119.5
C6—C5—H5120.1C16—C15—S111.53 (13)
C4—C5—H5120.1C16—C15—H15A109.3
C5—C6—C7116.30 (16)S—C15—H15A109.3
C5—C6—H6121.8C16—C15—H15B109.3
C7—C6—H6121.8S—C15—H15B109.3
O1—C7—C6125.43 (15)H15A—C15—H15B108.0
O1—C7—C2110.38 (14)C15—C16—H16A109.5
C6—C7—C2124.18 (16)C15—C16—H16B109.5
C1—C8—O1110.38 (14)H16A—C16—H16B109.5
C1—C8—C9135.43 (15)C15—C16—H16C109.5
O1—C8—C9114.16 (14)H16A—C16—H16C109.5
C10—C9—C14118.43 (16)H16B—C16—H16C109.5
O2—S—C1—C8130.71 (15)C2—C1—C8—O1−1.44 (18)
C15—S—C1—C8−119.40 (16)S—C1—C8—O1−176.28 (11)
O2—S—C1—C2−43.25 (16)C2—C1—C8—C9176.59 (17)
C15—S—C1—C266.64 (15)S—C1—C8—C91.8 (3)
C8—C1—C2—C71.33 (18)C7—O1—C8—C10.97 (17)
S—C1—C2—C7176.32 (12)C7—O1—C8—C9−177.52 (13)
C8—C1—C2—C3−177.60 (19)C1—C8—C9—C1020.4 (3)
S—C1—C2—C3−2.6 (3)O1—C8—C9—C10−161.65 (14)
C7—C2—C3—C40.7 (2)C1—C8—C9—C14−158.99 (19)
C1—C2—C3—C4179.52 (18)O1—C8—C9—C1419.0 (2)
C2—C3—C4—F−179.86 (15)C14—C9—C10—C110.8 (2)
C2—C3—C4—C50.3 (3)C8—C9—C10—C11−178.60 (15)
F—C4—C5—C6179.66 (16)C9—C10—C11—C12−1.2 (3)
C3—C4—C5—C6−0.5 (3)C10—C11—C12—C130.4 (3)
C4—C5—C6—C7−0.3 (3)C10—C11—C12—Cl−178.48 (13)
C8—O1—C7—C6179.89 (16)C11—C12—C13—C140.8 (3)
C8—O1—C7—C2−0.08 (17)Cl—C12—C13—C14179.64 (14)
C5—C6—C7—O1−178.60 (15)C12—C13—C14—C9−1.2 (3)
C5—C6—C7—C21.4 (3)C10—C9—C14—C130.4 (3)
C3—C2—C7—O1178.38 (14)C8—C9—C14—C13179.81 (16)
C1—C2—C7—O1−0.77 (18)O2—S—C15—C16−174.17 (12)
C3—C2—C7—C6−1.6 (3)C1—S—C15—C1675.90 (14)
C1—C2—C7—C6179.26 (15)
Cg is the centroid of the C9–C14 4-chlorophenyl ring.
D—H···AD—HH···AD···AD—H···A
C6—H6···O2i0.932.523.371 (2)152
C11—H11···O2ii0.932.533.116 (2)121
C15—H15A···Cgii0.972.663.560 (2)155
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C9–C14 4-chloro­phenyl ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯O2i0.932.523.371 (2)152
C11—H11⋯O2ii0.932.533.116 (2)121
C15—H15ACgii0.972.663.560 (2)155

Symmetry codes: (i) ; (ii) .

  8 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  5-Bromo-3-ethyl-sulfinyl-2-(4-fluoro-phenyl)-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-09

6.  5-Chloro-3-ethyl-sulfinyl-2-(4-fluoro-phen-yl)-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-20

7.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

8.  3-Ethyl-sulfinyl-2-(4-fluoro-phen-yl)-5-iodo-7-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-13
  8 in total
  3 in total

1.  3-Ethyl-sulfinyl-5-iodo-2-phenyl-1-benzofuran.

Authors:  Pil Ja Seo; Hong Dae Choi; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-26

2.  3-Ethyl-sulfinyl-2-(4-iodo-phen-yl)-5-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-10

3.  2-(4-Chloro-phen-yl)-3-ethyl-sulfinyl-5-iodo-7-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-11
  3 in total

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