Literature DB >> 21588632

5-Chloro-3-ethyl-sulfinyl-2-(4-iodo-phen-yl)-7-methyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(17)H(14)ClIO(2)S, the 4-iodo-phenyl ring makes a dihedral angle of 1.61 (9)° with the benzofuran ring system. In the crystal, mol-ecules are linked through a weak inter-molecular C-H⋯O hydrogen bond and an I⋯O contact [3.416 (2) Å]. The ethyl group is disordered over two orientations with site-occupancy factors of 0.402 (7) and 0.598 (7).

Entities:  

Year:  2010        PMID: 21588632      PMCID: PMC3007935          DOI: 10.1107/S160053681003134X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2006 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For the structures of related 3-ethyl­sulfinyl-2-(4-iodo­phen­yl)-1-benzofuran derivatives, see: Choi et al. (2010a ▶,b ▶). For a review of halogen bonding, see: Politzer et al. (2007 ▶).

Experimental

Crystal data

C17H14ClIO2S M = 444.69 Triclinic, a = 7.8013 (2) Å b = 10.4240 (3) Å c = 11.6003 (3) Å α = 115.962 (1)° β = 98.040 (1)° γ = 96.661 (1)° V = 823.00 (4) Å3 Z = 2 Mo Kα radiation μ = 2.24 mm−1 T = 173 K 0.48 × 0.34 × 0.16 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.473, T max = 0.746 14721 measured reflections 3773 independent reflections 3408 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.065 S = 1.06 3773 reflections 221 parameters 28 restraints H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.60 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681003134X/is2588sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681003134X/is2588Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H14ClIO2SZ = 2
Mr = 444.69F(000) = 436
Triclinic, P1Dx = 1.794 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.8013 (2) ÅCell parameters from 9231 reflections
b = 10.4240 (3) Åθ = 2.2–27.5°
c = 11.6003 (3) ŵ = 2.24 mm1
α = 115.962 (1)°T = 173 K
β = 98.040 (1)°Block, colourless
γ = 96.661 (1)°0.48 × 0.34 × 0.16 mm
V = 823.00 (4) Å3
Bruker SMART APEXII CCD diffractometer3773 independent reflections
Radiation source: rotating anode3408 reflections with I > 2σ(I)
graphite multilayerRint = 0.024
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 2.0°
φ and ω scansh = −9→10
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −13→13
Tmin = 0.473, Tmax = 0.746l = −15→15
14721 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: difference Fourier map
wR(F2) = 0.065H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.034P)2 + 0.2748P] where P = (Fo2 + 2Fc2)/3
3773 reflections(Δ/σ)max = 0.001
221 parametersΔρmax = 0.28 e Å3
28 restraintsΔρmin = −0.60 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
I0.64468 (2)0.843070 (18)0.633828 (13)0.05745 (7)
Cl−0.13606 (8)0.12905 (7)−0.54903 (5)0.06029 (16)
S0.05956 (8)0.20738 (7)0.00343 (6)0.05340 (14)
O10.26320 (19)0.55334 (15)−0.03279 (13)0.0397 (3)
O2−0.1151 (3)0.1273 (2)−0.0800 (2)0.0830 (7)
C3−0.0084 (3)0.2242 (2)−0.2921 (2)0.0432 (4)
H3−0.06630.1352−0.30310.052*
C10.1344 (3)0.3441 (2)−0.04020 (19)0.0398 (4)
C20.0905 (3)0.3316 (2)−0.17052 (19)0.0383 (4)
C4−0.0153 (3)0.2577 (2)−0.3946 (2)0.0440 (4)
C50.0668 (3)0.3905 (2)−0.3815 (2)0.0450 (5)
H50.05670.4065−0.45470.054*
C60.1637 (3)0.4998 (2)−0.2612 (2)0.0413 (4)
C70.1723 (3)0.4632 (2)−0.15913 (18)0.0377 (4)
C80.2378 (3)0.4790 (2)0.03875 (18)0.0384 (4)
C90.3273 (3)0.5601 (2)0.17695 (19)0.0396 (4)
C100.3167 (3)0.5045 (3)0.2654 (2)0.0498 (5)
H100.25030.41200.23700.060*
C110.4045 (3)0.5857 (3)0.3958 (2)0.0512 (5)
H110.39430.54810.45450.061*
C120.5061 (3)0.7208 (2)0.4386 (2)0.0446 (5)
C130.5151 (4)0.7794 (3)0.3532 (2)0.0611 (7)
H130.58150.87210.38250.073*
C140.4253 (4)0.7001 (3)0.2240 (2)0.0590 (6)
H140.43030.74100.16730.071*
C150.2513 (4)0.6454 (3)−0.2418 (3)0.0580 (6)
H15A0.37450.6468−0.24210.087*
H15B0.23850.7197−0.15930.087*
H15C0.19710.6631−0.31160.087*
C16A0.2618 (6)0.1332 (6)0.0089 (5)0.0561 (19)0.402 (7)
H16A0.36490.21080.05700.067*0.402 (7)
H16B0.25430.06970.04980.067*0.402 (7)
C17A0.2695 (15)0.0509 (8)−0.1310 (5)0.074 (2)0.402 (7)
H17A0.1592−0.0159−0.17890.112*0.402 (7)
H17B0.3633−0.0024−0.13820.112*0.402 (7)
H17C0.29090.1174−0.16650.112*0.402 (7)
C16B0.1842 (6)0.0735 (5)−0.0927 (4)0.0586 (13)0.598 (7)
H16C0.1382−0.0208−0.09980.070*0.598 (7)
H16D0.16860.0643−0.18060.070*0.598 (7)
C17B0.3749 (6)0.1176 (7)−0.0305 (6)0.0832 (18)0.598 (7)
H17D0.41740.2156−0.01400.125*0.598 (7)
H17E0.43860.0533−0.08820.125*0.598 (7)
H17F0.39200.11260.05080.125*0.598 (7)
U11U22U33U12U13U23
I0.05606 (11)0.06525 (12)0.03984 (9)−0.00242 (7)−0.00008 (6)0.02082 (7)
Cl0.0624 (3)0.0565 (3)0.0396 (3)0.0026 (3)0.0005 (2)0.0076 (2)
S0.0596 (3)0.0483 (3)0.0604 (3)0.0012 (3)0.0147 (3)0.0339 (3)
O10.0480 (7)0.0332 (7)0.0359 (7)0.0025 (6)0.0051 (5)0.0165 (5)
O20.0949 (15)0.0656 (12)0.0693 (12)−0.0320 (11)−0.0043 (11)0.0322 (10)
C30.0463 (10)0.0333 (10)0.0431 (10)0.0038 (8)0.0085 (8)0.0130 (8)
C10.0467 (10)0.0359 (10)0.0403 (10)0.0077 (8)0.0110 (8)0.0202 (8)
C20.0414 (10)0.0341 (9)0.0392 (9)0.0078 (8)0.0097 (8)0.0163 (8)
C40.0418 (10)0.0425 (11)0.0356 (9)0.0073 (8)0.0036 (8)0.0090 (8)
C50.0496 (11)0.0497 (12)0.0378 (10)0.0118 (9)0.0089 (8)0.0218 (9)
C60.0459 (10)0.0390 (10)0.0428 (10)0.0083 (8)0.0113 (8)0.0217 (8)
C70.0404 (9)0.0343 (9)0.0358 (9)0.0059 (7)0.0067 (7)0.0146 (7)
C80.0446 (10)0.0359 (10)0.0387 (9)0.0088 (8)0.0107 (8)0.0199 (8)
C90.0414 (10)0.0376 (10)0.0379 (9)0.0068 (8)0.0071 (7)0.0163 (8)
C100.0586 (13)0.0419 (11)0.0452 (11)−0.0001 (10)0.0009 (9)0.0222 (9)
C110.0588 (13)0.0525 (13)0.0437 (11)0.0043 (10)0.0028 (9)0.0273 (10)
C120.0428 (10)0.0503 (12)0.0363 (9)0.0061 (9)0.0046 (8)0.0179 (9)
C130.0743 (16)0.0502 (13)0.0463 (12)−0.0156 (12)−0.0007 (11)0.0216 (10)
C140.0800 (16)0.0503 (13)0.0409 (11)−0.0101 (12)0.0022 (11)0.0246 (10)
C150.0709 (15)0.0502 (13)0.0551 (13)−0.0005 (11)0.0093 (11)0.0306 (11)
C16A0.076 (4)0.041 (3)0.050 (3)0.005 (3)0.002 (3)0.025 (3)
C17A0.112 (6)0.057 (4)0.062 (4)0.028 (4)0.015 (4)0.033 (3)
C16B0.084 (3)0.044 (2)0.051 (3)0.017 (2)0.019 (2)0.0216 (19)
C17B0.081 (4)0.094 (4)0.099 (4)0.037 (3)0.035 (3)0.057 (3)
I—C122.095 (2)C10—C111.389 (3)
I—O2i3.416 (2)C10—H100.9300
Cl—C41.739 (2)C11—C121.370 (3)
S—O21.466 (2)C11—H110.9300
S—C11.774 (2)C12—C131.378 (3)
S—C16A1.841 (4)C13—C141.381 (3)
S—C16B1.842 (4)C13—H130.9300
O1—C71.372 (2)C14—H140.9300
O1—C81.379 (2)C15—H15A0.9600
C3—C41.374 (3)C15—H15B0.9600
C3—C21.397 (3)C15—H15C0.9600
C3—H30.9300C16A—C17A1.4807 (15)
C1—C81.368 (3)C16A—H16A0.9700
C1—C21.447 (3)C16A—H16B0.9700
C2—C71.386 (3)C17A—H17A0.9600
C4—C51.390 (3)C17A—H17B0.9600
C5—C61.389 (3)C17A—H17C0.9600
C5—H50.9300C16B—C17B1.4812 (15)
C6—C71.391 (3)C16B—H16C0.9700
C6—C151.495 (3)C16B—H16D0.9700
C8—C91.461 (3)C17B—H17D0.9600
C9—C101.389 (3)C17B—H17E0.9600
C9—C141.392 (3)C17B—H17F0.9600
C12—I—O2i161.46 (7)C12—C11—C10120.4 (2)
O2—S—C1108.18 (11)C12—C11—H11119.8
O2—S—C16A126.7 (2)C10—C11—H11119.8
C1—S—C16A99.2 (2)C11—C12—C13119.9 (2)
O2—S—C16B96.09 (17)C11—C12—I121.10 (16)
C1—S—C16B96.62 (17)C13—C12—I119.02 (16)
C7—O1—C8106.81 (15)C12—C13—C14119.8 (2)
C4—C3—C2116.20 (19)C12—C13—H13120.1
C4—C3—H3121.9C14—C13—H13120.1
C2—C3—H3121.9C13—C14—C9121.3 (2)
C8—C1—C2106.99 (17)C13—C14—H14119.3
C8—C1—S128.36 (16)C9—C14—H14119.3
C2—C1—S124.63 (15)C6—C15—H15A109.5
C7—C2—C3119.59 (18)C6—C15—H15B109.5
C7—C2—C1105.15 (16)H15A—C15—H15B109.5
C3—C2—C1135.26 (19)C6—C15—H15C109.5
C3—C4—C5123.51 (19)H15A—C15—H15C109.5
C3—C4—Cl118.70 (17)H15B—C15—H15C109.5
C5—C4—Cl117.78 (17)C17A—C16A—S103.8 (4)
C6—C5—C4121.43 (19)C17A—C16A—H16A111.0
C6—C5—H5119.3S—C16A—H16A111.0
C4—C5—H5119.3C17A—C16A—H16B111.0
C5—C6—C7114.33 (19)S—C16A—H16B111.0
C5—C6—C15123.3 (2)H16A—C16A—H16B109.0
C7—C6—C15122.3 (2)C17B—C16B—S111.2 (3)
O1—C7—C2110.77 (17)C17B—C16B—H16C109.4
O1—C7—C6124.31 (18)S—C16B—H16C109.4
C2—C7—C6124.93 (18)C17B—C16B—H16D109.4
C1—C8—O1110.28 (16)S—C16B—H16D109.4
C1—C8—C9135.71 (19)H16C—C16B—H16D108.0
O1—C8—C9114.00 (16)C16B—C17B—H17D109.5
C10—C9—C14117.86 (19)C16B—C17B—H17E109.5
C10—C9—C8122.76 (19)H17D—C17B—H17E109.5
C14—C9—C8119.37 (19)C16B—C17B—H17F109.5
C9—C10—C11120.6 (2)H17D—C17B—H17F109.5
C9—C10—H10119.7H17E—C17B—H17F109.5
C11—C10—H10119.7
O2—S—C1—C8147.2 (2)C2—C1—C8—O1−0.2 (2)
C16A—S—C1—C8−79.1 (3)S—C1—C8—O1−178.82 (15)
C16B—S—C1—C8−114.1 (2)C2—C1—C8—C9−179.1 (2)
O2—S—C1—C2−31.1 (2)S—C1—C8—C92.3 (4)
C16A—S—C1—C2102.6 (2)C7—O1—C8—C10.6 (2)
C16B—S—C1—C267.5 (2)C7—O1—C8—C9179.74 (16)
C4—C3—C2—C70.8 (3)C1—C8—C9—C10−1.6 (4)
C4—C3—C2—C1−179.5 (2)O1—C8—C9—C10179.5 (2)
C8—C1—C2—C7−0.2 (2)C1—C8—C9—C14179.6 (3)
S—C1—C2—C7178.46 (15)O1—C8—C9—C140.7 (3)
C8—C1—C2—C3−179.9 (2)C14—C9—C10—C11−1.3 (4)
S—C1—C2—C3−1.2 (4)C8—C9—C10—C11179.9 (2)
C2—C3—C4—C5−1.2 (3)C9—C10—C11—C12−1.4 (4)
C2—C3—C4—Cl180.00 (15)C10—C11—C12—C132.9 (4)
C3—C4—C5—C60.3 (3)C10—C11—C12—I−178.48 (19)
Cl—C4—C5—C6179.08 (17)O2i—I—C12—C11−167.99 (19)
C4—C5—C6—C71.0 (3)O2i—I—C12—C1310.6 (4)
C4—C5—C6—C15−178.8 (2)C11—C12—C13—C14−1.6 (4)
C8—O1—C7—C2−0.7 (2)I—C12—C13—C14179.7 (2)
C8—O1—C7—C6179.17 (19)C12—C13—C14—C9−1.1 (4)
C3—C2—C7—O1−179.68 (18)C10—C9—C14—C132.5 (4)
C1—C2—C7—O10.6 (2)C8—C9—C14—C13−178.6 (3)
C3—C2—C7—C60.4 (3)O2—S—C16A—C17A48.1 (6)
C1—C2—C7—C6−179.3 (2)C1—S—C16A—C17A−72.9 (5)
C5—C6—C7—O1178.80 (18)C16B—S—C16A—C17A15.4 (5)
C15—C6—C7—O1−1.5 (3)O2—S—C16B—C17B−177.3 (4)
C5—C6—C7—C2−1.3 (3)C1—S—C16B—C17B73.5 (4)
C15—C6—C7—C2178.4 (2)C16A—S—C16B—C17B−23.2 (4)
D—H···AD—HH···AD···AD—H···A
C16A—H16B···O2ii0.972.403.297 (6)154.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C16A—H16B⋯O2i0.972.403.297 (6)154

Symmetry code: (i) .

  8 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  An overview of halogen bonding.

Authors:  Peter Politzer; Pat Lane; Monica C Concha; Yuguang Ma; Jane S Murray
Journal:  J Mol Model       Date:  2006-09-30       Impact factor: 1.810

5.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

6.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

7.  3-Ethyl-sulfinyl-5-fluoro-2-(4-iodo-phen-yl)-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-30

8.  3-Ethyl-sulfinyl-2-(4-iodo-phen-yl)-5-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-10
  8 in total
  2 in total

1.  5-Bromo-2-(4-chloro-phen-yl)-3-ethyl-sulfinyl-7-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-30

2.  5-Chloro-3-ethyl-sulfinyl-7-methyl-2-(4-methyl-phen-yl)-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-03-19
  2 in total

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