Literature DB >> 21588770

5-Chloro-3-ethyl-sulfinyl-2-(4-iodo-phen-yl)-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(16)H(12)ClIO(2)S, the 4-iodo-phenyl ring is rotated out of the benzofuran plane by 9.4 (1)°. In the crystal structure, inter-molecular C-H⋯π inter-actions and short inter-molecular I⋯O contacts [3.142 (2) Å] are observed.

Entities:  

Year:  2010        PMID: 21588770      PMCID: PMC3008065          DOI: 10.1107/S1600536810033581

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of related 3-ethyl­sulfinyl-2-(4-iodo­phen­yl)-1-benzofuran derivatives, see: Choi et al. (2010 ▶). For a review on halogen bonding, see: Politzer et al. (2007 ▶).

Experimental

Crystal data

C16H12ClIO2S M = 430.67 Monoclinic, a = 11.9782 (3) Å b = 10.4604 (3) Å c = 12.9624 (4) Å β = 107.827 (1)° V = 1546.16 (8) Å3 Z = 4 Mo Kα radiation μ = 2.38 mm−1 T = 173 K 0.35 × 0.25 × 0.14 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.514, T max = 0.746 14190 measured reflections 3549 independent reflections 3252 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.054 S = 1.67 3549 reflections 191 parameters H-atom parameters constrained Δρmax = 0.75 e Å−3 Δρmin = −0.91 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810033581/nc2194sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810033581/nc2194Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12ClIO2SF(000) = 840
Mr = 430.67Dx = 1.850 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 8003 reflections
a = 11.9782 (3) Åθ = 2.6–27.5°
b = 10.4604 (3) ŵ = 2.38 mm1
c = 12.9624 (4) ÅT = 173 K
β = 107.827 (1)°Block, colourless
V = 1546.16 (8) Å30.35 × 0.25 × 0.14 mm
Z = 4
Bruker SMART APEXII CCD diffractometer3549 independent reflections
Radiation source: rotating anode3252 reflections with I > 2σ(I)
graphite multilayerRint = 0.032
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 2.6°
φ and ω scansh = −15→15
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −13→13
Tmin = 0.514, Tmax = 0.746l = −16→15
14190 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.025Hydrogen site location: difference Fourier map
wR(F2) = 0.054H-atom parameters constrained
S = 1.67w = 1/[σ2(Fo2) + (0.P)2] where P = (Fo2 + 2Fc2)/3
3549 reflections(Δ/σ)max = 0.001
191 parametersΔρmax = 0.75 e Å3
0 restraintsΔρmin = −0.91 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I0.020729 (12)0.410793 (14)0.735141 (13)0.03083 (6)
Cl0.91427 (5)0.77704 (6)0.50411 (5)0.03458 (14)
S0.66881 (5)0.44141 (5)0.74904 (5)0.02532 (12)
O10.45082 (12)0.67491 (14)0.53906 (12)0.0240 (3)
O20.75087 (15)0.37662 (16)0.69934 (15)0.0382 (4)
C10.59438 (18)0.56061 (19)0.65608 (17)0.0217 (4)
C20.64728 (18)0.6403 (2)0.59295 (17)0.0215 (4)
C30.76078 (18)0.6605 (2)0.58850 (18)0.0243 (5)
H30.82490.61810.63490.029*
C40.77369 (19)0.74651 (19)0.51177 (18)0.0249 (5)
C50.6793 (2)0.8095 (2)0.43905 (19)0.0287 (5)
H50.69210.86470.38750.034*
C60.5667 (2)0.7897 (2)0.44369 (19)0.0293 (5)
H60.50230.83090.39650.035*
C70.55461 (18)0.7064 (2)0.52149 (17)0.0229 (4)
C80.47620 (18)0.58480 (19)0.62118 (17)0.0220 (4)
C90.37422 (17)0.5421 (2)0.65070 (17)0.0222 (4)
C100.2620 (2)0.5747 (2)0.5829 (2)0.0274 (5)
H100.25410.62100.51990.033*
C110.16345 (19)0.5382 (2)0.60939 (19)0.0290 (5)
H110.08950.56250.56540.035*
C120.17458 (18)0.4656 (2)0.70127 (18)0.0242 (5)
C130.2839 (2)0.4300 (2)0.7671 (2)0.0335 (6)
H130.29110.37970.82790.040*
C140.38293 (19)0.4693 (2)0.74239 (19)0.0320 (5)
H140.45660.44670.78800.038*
C150.7574 (2)0.5465 (2)0.8530 (2)0.0342 (6)
H15A0.82210.49840.90040.041*
H15B0.79000.61360.81920.041*
C160.6874 (3)0.6064 (2)0.9197 (2)0.0447 (7)
H16A0.62640.65890.87390.067*
H16B0.73820.65790.97600.067*
H16C0.65310.54020.95160.067*
U11U22U33U12U13U23
I0.02630 (9)0.03230 (10)0.03857 (11)−0.00398 (6)0.01689 (7)−0.00332 (6)
Cl0.0289 (3)0.0336 (3)0.0473 (4)−0.0040 (2)0.0206 (3)−0.0008 (3)
S0.0215 (3)0.0245 (3)0.0300 (3)0.0028 (2)0.0080 (2)0.0053 (2)
O10.0194 (7)0.0275 (8)0.0247 (8)0.0010 (6)0.0061 (6)0.0032 (6)
O20.0343 (9)0.0375 (9)0.0468 (11)0.0128 (8)0.0186 (8)0.0069 (8)
C10.0218 (10)0.0211 (10)0.0218 (12)0.0017 (8)0.0058 (8)0.0008 (8)
C20.0222 (10)0.0205 (10)0.0223 (11)0.0002 (8)0.0073 (8)−0.0019 (8)
C30.0210 (10)0.0236 (11)0.0282 (12)0.0021 (9)0.0076 (9)0.0000 (9)
C40.0237 (10)0.0240 (11)0.0295 (13)−0.0030 (9)0.0120 (9)−0.0048 (9)
C50.0338 (12)0.0277 (12)0.0265 (13)−0.0031 (10)0.0121 (10)0.0036 (9)
C60.0278 (11)0.0307 (12)0.0274 (13)0.0023 (10)0.0054 (9)0.0047 (10)
C70.0202 (10)0.0246 (11)0.0235 (12)−0.0010 (8)0.0062 (9)−0.0017 (9)
C80.0228 (10)0.0217 (10)0.0205 (11)0.0003 (8)0.0052 (8)−0.0018 (8)
C90.0191 (10)0.0229 (10)0.0243 (12)−0.0004 (8)0.0061 (8)−0.0027 (9)
C100.0254 (11)0.0255 (11)0.0305 (13)0.0005 (9)0.0072 (9)0.0069 (9)
C110.0191 (10)0.0288 (11)0.0362 (14)0.0018 (9)0.0042 (9)0.0045 (10)
C120.0200 (10)0.0251 (11)0.0298 (13)−0.0021 (9)0.0110 (9)−0.0055 (9)
C130.0288 (12)0.0459 (15)0.0280 (14)0.0019 (11)0.0121 (10)0.0084 (11)
C140.0198 (11)0.0482 (15)0.0274 (13)0.0027 (10)0.0063 (9)0.0059 (11)
C150.0295 (12)0.0372 (13)0.0291 (14)−0.0065 (11)−0.0012 (10)0.0073 (10)
C160.0638 (19)0.0336 (14)0.0331 (15)−0.0055 (13)0.0093 (13)−0.0016 (11)
I—C122.101 (2)C6—H60.9300
I—O2i3.1422 (17)C8—C91.458 (3)
Cl—C41.746 (2)C9—C141.388 (3)
S—O21.4928 (17)C9—C101.404 (3)
S—C11.773 (2)C10—C111.380 (3)
S—C151.810 (2)C10—H100.9300
O1—C71.371 (2)C11—C121.384 (3)
O1—C81.384 (2)C11—H110.9300
C1—C81.371 (3)C12—C131.378 (3)
C1—C21.444 (3)C13—C141.382 (3)
C2—C71.392 (3)C13—H130.9300
C2—C31.394 (3)C14—H140.9300
C3—C41.385 (3)C15—C161.513 (4)
C3—H30.9300C15—H15A0.9700
C4—C51.396 (3)C15—H15B0.9700
C5—C61.384 (3)C16—H16A0.9600
C5—H50.9300C16—H16B0.9600
C6—C71.374 (3)C16—H16C0.9600
C12—I—O2i158.24 (7)C14—C9—C8122.93 (19)
O2—S—C1106.65 (10)C10—C9—C8118.68 (19)
O2—S—C15106.48 (11)C11—C10—C9120.4 (2)
C1—S—C1597.87 (11)C11—C10—H10119.8
C7—O1—C8107.13 (15)C9—C10—H10119.8
C8—C1—C2107.12 (18)C10—C11—C12120.1 (2)
C8—C1—S127.41 (16)C10—C11—H11120.0
C2—C1—S125.09 (16)C12—C11—H11120.0
C7—C2—C3119.10 (19)C13—C12—C11120.3 (2)
C7—C2—C1105.36 (18)C13—C12—I121.68 (17)
C3—C2—C1135.5 (2)C11—C12—I118.04 (15)
C4—C3—C2116.9 (2)C12—C13—C14119.8 (2)
C4—C3—H3121.5C12—C13—H13120.1
C2—C3—H3121.5C14—C13—H13120.1
C3—C4—C5123.1 (2)C13—C14—C9121.1 (2)
C3—C4—Cl118.77 (17)C13—C14—H14119.4
C5—C4—Cl118.11 (17)C9—C14—H14119.4
C6—C5—C4119.9 (2)C16—C15—S112.07 (18)
C6—C5—H5120.0C16—C15—H15A109.2
C4—C5—H5120.0S—C15—H15A109.2
C7—C6—C5116.7 (2)C16—C15—H15B109.2
C7—C6—H6121.6S—C15—H15B109.2
C5—C6—H6121.6H15A—C15—H15B107.9
O1—C7—C6125.38 (19)C15—C16—H16A109.5
O1—C7—C2110.43 (18)C15—C16—H16B109.5
C6—C7—C2124.19 (19)H16A—C16—H16B109.5
C1—C8—O1109.93 (18)C15—C16—H16C109.5
C1—C8—C9136.1 (2)H16A—C16—H16C109.5
O1—C8—C9113.98 (17)H16B—C16—H16C109.5
C14—C9—C10118.39 (19)
O2—S—C1—C8132.8 (2)S—C1—C8—O1−172.77 (15)
C15—S—C1—C8−117.3 (2)C2—C1—C8—C9−177.9 (2)
O2—S—C1—C2−39.1 (2)S—C1—C8—C99.1 (4)
C15—S—C1—C270.8 (2)C7—O1—C8—C10.7 (2)
C8—C1—C2—C7−1.2 (2)C7—O1—C8—C9179.31 (17)
S—C1—C2—C7172.11 (16)C1—C8—C9—C149.4 (4)
C8—C1—C2—C3−179.9 (2)O1—C8—C9—C14−168.7 (2)
S—C1—C2—C3−6.6 (4)C1—C8—C9—C10−170.0 (2)
C7—C2—C3—C40.0 (3)O1—C8—C9—C1011.9 (3)
C1—C2—C3—C4178.6 (2)C14—C9—C10—C112.0 (3)
C2—C3—C4—C5−1.6 (3)C8—C9—C10—C11−178.6 (2)
C2—C3—C4—Cl179.06 (16)C9—C10—C11—C12−2.1 (3)
C3—C4—C5—C61.8 (3)C10—C11—C12—C130.4 (3)
Cl—C4—C5—C6−178.83 (18)C10—C11—C12—I−178.92 (17)
C4—C5—C6—C7−0.4 (3)O2i—I—C12—C13−172.72 (15)
C8—O1—C7—C6177.6 (2)O2i—I—C12—C116.6 (3)
C8—O1—C7—C2−1.5 (2)C11—C12—C13—C141.4 (4)
C5—C6—C7—O1179.7 (2)I—C12—C13—C14−179.32 (18)
C5—C6—C7—C2−1.3 (3)C12—C13—C14—C9−1.5 (4)
C3—C2—C7—O1−179.39 (19)C10—C9—C14—C13−0.2 (4)
C1—C2—C7—O11.6 (2)C8—C9—C14—C13−179.6 (2)
C3—C2—C7—C61.5 (3)O2—S—C15—C16−172.90 (17)
C1—C2—C7—C6−177.5 (2)C1—S—C15—C1677.08 (19)
C2—C1—C8—O10.3 (2)
Cg is the centroid of the C2–C7 phenyl ring.
D—H···AD—HH···AD···AD—H···A
C15—H15A···Cgii0.973.043.750 (3)131.
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C2–C7 phenyl ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H15ACgi0.973.043.750 (3)131

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An overview of halogen bonding.

Authors:  Peter Politzer; Pat Lane; Monica C Concha; Yuguang Ma; Jane S Murray
Journal:  J Mol Model       Date:  2006-09-30       Impact factor: 1.810

3.  3-Ethyl-sulfinyl-5-fluoro-2-(4-iodo-phen-yl)-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-30

4.  3-Ethyl-sulfinyl-2-(4-iodo-phen-yl)-5-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-10
  4 in total
  1 in total

1.  5-Chloro-3-ethyl-sulfinyl-2-(3-fluoro-phen-yl)-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-06
  1 in total

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