Literature DB >> 21588025

(R)-4-Phenyl-2-[(S)-1,2,3,4-tetra-hydro-isoquinolin-3-yl]-4,5-dihydro-1,3-oxazole.

Sai K Chakka, Thavendran Govender, Hendrik G Kruger, Glenn E M Maguire.   

Abstract

The asymmetric unit cell of the title compound, C(18)H(18)N(2)O, contains four molecules. In the crystal structure, an inter-molecular N-H⋯N hydrogen bond helps to establish the packing.

Entities:  

Year:  2010        PMID: 21588025      PMCID: PMC3006893          DOI: 10.1107/S1600536810022130

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the assymetric synthetic applications of oxazoline, see: Hargaden et al. (2009 ▶). For tetra­isoquinolines and their biological significance, see: Scott et al. (2002 ▶). For ligand catalysis activity, see: Chakka et al. (2010 ▶).

Experimental

Crystal data

C18H18N2O M = 278.34 Orthorhombic, a = 5.4023 (3) Å b = 10.0999 (6) Å c = 26.2205 (17) Å V = 1430.66 (15) Å3 Z = 4 Cu Kα radiation μ = 0.64 mm−1 T = 173 K 0.22 × 0.21 × 0.10 mm

Data collection

Bruker Kappa DUO APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1997 ▶) T min = 0.682, T max = 0.753 6634 measured reflections 1552 independent reflections 1479 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.076 S = 1.05 1552 reflections 195 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.12 e Å−3 Data collection: SAINT (Bruker, 2006 ▶); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810022130/hg2694sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810022130/hg2694Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H18N2OF(000) = 592
Mr = 278.34Dx = 1.292 Mg m3
Orthorhombic, P212121Cu Kα radiation, λ = 1.54178 Å
Hall symbol: P 2ac 2abCell parameters from 6634 reflections
a = 5.4023 (3) Åθ = 4.7–69.2°
b = 10.0999 (6) ŵ = 0.64 mm1
c = 26.2205 (17) ÅT = 173 K
V = 1430.66 (15) Å3Needle, colourless
Z = 40.22 × 0.21 × 0.10 mm
Bruker Kappa DUO APEXII diffractometer1552 independent reflections
Radiation source: fine-focus sealed tube1479 reflections with I > 2σ(I)
graphiteRint = 0.036
Detector resolution: n/a pixels mm-1θmax = 69.2°, θmin = 4.7°
0.5° φ scans and ω scansh = −6→6
Absorption correction: multi-scan (SADABS; Sheldrick, 1997)k = −11→12
Tmin = 0.682, Tmax = 0.753l = −15→30
6634 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.030H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.076w = 1/[σ2(Fo2) + (0.0436P)2 + 0.1838P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
1552 reflectionsΔρmax = 0.14 e Å3
195 parametersΔρmin = −0.12 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0039 (5)
Experimental. Half sphere of data collected using SAINT strategy (Bruker, 2006). Crystal to detector distance = 50 mm; combination of φ and ω scans of 0.5°, 30 s per °, 2 iterations.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.4184 (2)0.79986 (13)0.19408 (5)0.0306 (3)
N10.5780 (3)1.06125 (15)0.15598 (6)0.0272 (3)
H1N0.702 (3)1.0028 (18)0.1694 (7)0.033 (6)*
N20.0533 (3)0.90911 (15)0.19216 (6)0.0285 (4)
C10.6813 (4)1.15005 (18)0.11756 (7)0.0324 (4)
H1A0.82141.19910.13290.039*
H1B0.55331.21570.10800.039*
C20.7714 (3)1.08180 (18)0.06969 (7)0.0269 (4)
C30.9535 (4)1.13952 (18)0.03901 (7)0.0322 (4)
H31.01841.22380.04800.039*
C41.0408 (4)1.0762 (2)−0.00419 (7)0.0363 (5)
H41.16561.1162−0.02450.044*
C50.9444 (4)0.9538 (2)−0.01748 (7)0.0382 (5)
H51.00250.9096−0.04710.046*
C60.7634 (4)0.89605 (19)0.01249 (7)0.0356 (5)
H60.69780.81230.00310.043*
C70.6755 (4)0.95876 (18)0.05633 (7)0.0285 (4)
C80.4854 (4)0.89025 (19)0.08944 (7)0.0350 (5)
H8A0.56060.80970.10430.042*
H8B0.34480.86210.06780.042*
C90.3869 (3)0.97793 (18)0.13282 (7)0.0272 (4)
H90.25671.03740.11830.033*
C100.2691 (3)0.89535 (18)0.17416 (7)0.0260 (4)
C110.2612 (3)0.72424 (17)0.22836 (7)0.0279 (4)
H11A0.34440.70890.26150.033*
H11B0.21590.63780.21320.033*
C120.0312 (3)0.81315 (17)0.23493 (7)0.0258 (4)
H12−0.12260.75920.23080.031*
C130.0251 (3)0.88531 (17)0.28547 (6)0.0247 (4)
C14−0.1619 (3)0.86228 (18)0.32043 (7)0.0288 (4)
H14−0.29020.80140.31240.035*
C15−0.1639 (4)0.92738 (19)0.36719 (7)0.0327 (4)
H15−0.29320.91060.39090.039*
C160.0209 (4)1.01606 (19)0.37932 (7)0.0329 (4)
H160.01881.06080.41120.040*
C170.2105 (4)1.03964 (19)0.34458 (7)0.0330 (4)
H170.33941.09990.35280.040*
C180.2114 (3)0.97527 (18)0.29802 (7)0.0290 (4)
H180.34030.99250.27430.035*
U11U22U33U12U13U23
O10.0268 (6)0.0313 (6)0.0336 (7)0.0056 (6)0.0025 (5)0.0064 (5)
N10.0279 (7)0.0272 (7)0.0267 (7)0.0012 (7)0.0002 (6)−0.0021 (6)
N20.0249 (7)0.0349 (8)0.0257 (7)0.0035 (7)−0.0025 (6)0.0027 (7)
C10.0363 (11)0.0260 (8)0.0349 (10)−0.0015 (8)0.0026 (8)−0.0034 (8)
C20.0281 (9)0.0266 (8)0.0260 (8)0.0031 (8)−0.0035 (7)0.0029 (7)
C30.0335 (10)0.0292 (9)0.0338 (10)−0.0020 (8)−0.0014 (8)0.0045 (8)
C40.0385 (10)0.0396 (10)0.0309 (9)0.0013 (10)0.0044 (8)0.0087 (8)
C50.0493 (12)0.0387 (10)0.0267 (9)0.0046 (10)0.0070 (9)0.0009 (8)
C60.0488 (12)0.0302 (9)0.0279 (9)−0.0025 (9)0.0006 (8)−0.0024 (7)
C70.0326 (9)0.0291 (9)0.0237 (8)0.0016 (8)−0.0018 (7)0.0029 (7)
C80.0437 (12)0.0335 (9)0.0277 (9)−0.0099 (9)0.0030 (8)−0.0035 (8)
C90.0253 (9)0.0310 (9)0.0252 (9)0.0017 (8)−0.0027 (7)0.0016 (7)
C100.0260 (9)0.0272 (8)0.0247 (8)0.0024 (8)−0.0050 (7)−0.0001 (7)
C110.0297 (9)0.0262 (8)0.0278 (9)0.0022 (8)0.0005 (7)0.0006 (7)
C120.0227 (8)0.0284 (8)0.0262 (8)0.0007 (7)−0.0006 (7)−0.0002 (8)
C130.0232 (8)0.0245 (8)0.0264 (8)0.0045 (7)−0.0024 (7)0.0029 (7)
C140.0254 (9)0.0281 (9)0.0329 (10)−0.0005 (8)0.0017 (8)0.0027 (7)
C150.0311 (10)0.0358 (10)0.0313 (9)0.0013 (9)0.0059 (8)0.0021 (8)
C160.0360 (11)0.0361 (9)0.0267 (8)0.0044 (9)−0.0025 (8)−0.0049 (8)
C170.0320 (9)0.0301 (9)0.0368 (10)−0.0044 (8)−0.0050 (8)−0.0035 (8)
C180.0244 (9)0.0310 (9)0.0316 (9)−0.0010 (8)0.0011 (7)0.0030 (8)
O1—C101.362 (2)C8—C91.537 (2)
O1—C111.454 (2)C8—H8A0.9900
N1—C11.460 (2)C8—H8B0.9900
N1—C91.464 (2)C9—C101.508 (2)
N1—H1N0.960 (10)C9—H91.0000
N2—C101.265 (2)C11—C121.542 (3)
N2—C121.487 (2)C11—H11A0.9900
C1—C21.513 (2)C11—H11B0.9900
C1—H1A0.9900C12—C131.513 (2)
C1—H1B0.9900C12—H121.0000
C2—C71.391 (3)C13—C141.384 (2)
C2—C31.398 (3)C13—C181.395 (3)
C3—C41.384 (3)C14—C151.391 (3)
C3—H30.9500C14—H140.9500
C4—C51.386 (3)C15—C161.378 (3)
C4—H40.9500C15—H150.9500
C5—C61.383 (3)C16—C171.391 (3)
C5—H50.9500C16—H160.9500
C6—C71.396 (3)C17—C181.383 (3)
C6—H60.9500C17—H170.9500
C7—C81.512 (3)C18—H180.9500
C10—O1—C11105.26 (13)C10—C9—C8111.06 (15)
C1—N1—C9109.66 (14)N1—C9—H9108.0
C1—N1—H1N111.3 (13)C10—C9—H9108.0
C9—N1—H1N106.9 (13)C8—C9—H9108.0
C10—N2—C12106.47 (15)N2—C10—O1118.72 (17)
N1—C1—C2114.56 (14)N2—C10—C9126.58 (17)
N1—C1—H1A108.6O1—C10—C9114.67 (15)
C2—C1—H1A108.6O1—C11—C12103.52 (14)
N1—C1—H1B108.6O1—C11—H11A111.1
C2—C1—H1B108.6C12—C11—H11A111.1
H1A—C1—H1B107.6O1—C11—H11B111.1
C7—C2—C3119.32 (17)C12—C11—H11B111.1
C7—C2—C1119.75 (16)H11A—C11—H11B109.0
C3—C2—C1120.92 (17)N2—C12—C13110.39 (13)
C4—C3—C2121.21 (18)N2—C12—C11103.33 (14)
C4—C3—H3119.4C13—C12—C11113.32 (14)
C2—C3—H3119.4N2—C12—H12109.9
C3—C4—C5119.33 (19)C13—C12—H12109.9
C3—C4—H4120.3C11—C12—H12109.9
C5—C4—H4120.3C14—C13—C18118.68 (17)
C6—C5—C4119.93 (19)C14—C13—C12121.02 (16)
C6—C5—H5120.0C18—C13—C12120.29 (15)
C4—C5—H5120.0C13—C14—C15120.66 (17)
C5—C6—C7121.13 (19)C13—C14—H14119.7
C5—C6—H6119.4C15—C14—H14119.7
C7—C6—H6119.4C16—C15—C14120.32 (18)
C2—C7—C6119.08 (18)C16—C15—H15119.8
C2—C7—C8121.13 (16)C14—C15—H15119.8
C6—C7—C8119.76 (17)C15—C16—C17119.57 (17)
C7—C8—C9113.36 (15)C15—C16—H16120.2
C7—C8—H8A108.9C17—C16—H16120.2
C9—C8—H8A108.9C18—C17—C16119.98 (18)
C7—C8—H8B108.9C18—C17—H17120.0
C9—C8—H8B108.9C16—C17—H17120.0
H8A—C8—H8B107.7C17—C18—C13120.78 (17)
N1—C9—C10108.50 (14)C17—C18—H18119.6
N1—C9—C8113.21 (15)C13—C18—H18119.6
C9—N1—C1—C2−52.7 (2)C11—O1—C10—C9−173.78 (14)
N1—C1—C2—C723.6 (3)N1—C9—C10—N2108.6 (2)
N1—C1—C2—C3−155.27 (17)C8—C9—C10—N2−126.4 (2)
C7—C2—C3—C4−0.4 (3)N1—C9—C10—O1−69.47 (19)
C1—C2—C3—C4178.49 (18)C8—C9—C10—O155.6 (2)
C2—C3—C4—C50.5 (3)C10—O1—C11—C12−14.48 (17)
C3—C4—C5—C6−0.3 (3)C10—N2—C12—C13109.57 (16)
C4—C5—C6—C7−0.2 (3)C10—N2—C12—C11−11.91 (18)
C3—C2—C7—C6−0.1 (3)O1—C11—C12—N215.96 (17)
C1—C2—C7—C6−178.97 (17)O1—C11—C12—C13−103.52 (16)
C3—C2—C7—C8177.66 (17)N2—C12—C13—C14127.42 (17)
C1—C2—C7—C8−1.2 (3)C11—C12—C13—C14−117.22 (18)
C5—C6—C7—C20.4 (3)N2—C12—C13—C18−53.6 (2)
C5—C6—C7—C8−177.41 (18)C11—C12—C13—C1861.8 (2)
C2—C7—C8—C98.5 (3)C18—C13—C14—C15−0.1 (3)
C6—C7—C8—C9−173.72 (17)C12—C13—C14—C15178.90 (16)
C1—N1—C9—C10−175.40 (15)C13—C14—C15—C160.1 (3)
C1—N1—C9—C860.83 (19)C14—C15—C16—C17−0.3 (3)
C7—C8—C9—N1−38.5 (2)C15—C16—C17—C180.7 (3)
C7—C8—C9—C10−160.89 (15)C16—C17—C18—C13−0.7 (3)
C12—N2—C10—O13.0 (2)C14—C13—C18—C170.4 (3)
C12—N2—C10—C9−174.98 (16)C12—C13—C18—C17−178.58 (17)
C11—O1—C10—N28.0 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1N···N2i0.96 (1)2.20 (1)3.139 (2)165 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯N2i0.96 (1)2.20 (1)3.139 (2)165 (2)

Symmetry code: (i) .

  3 in total

Review 1.  Chemistry and biology of the tetrahydroisoquinoline antitumor antibiotics.

Authors:  Jack D Scott; Robert M Williams
Journal:  Chem Rev       Date:  2002-05       Impact factor: 60.622

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  Recent applications of oxazoline-containing ligands in asymmetric catalysis.

Authors:  Gráinne C Hargaden; Patrick J Guiry
Journal:  Chem Rev       Date:  2009-06       Impact factor: 60.622

  3 in total
  3 in total

1.  (S)-N-Benzyl-2-methyl-1,2,3,4-tetra-hydro-isoquinoline-3-carboxamide.

Authors:  Tricia Naicker; Thavendran Govender; Hendrik G Kruger; Glenn E M Maguire
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-11

2.  [(1R,3S)-6,7-Dimeth-oxy-1-phenyl-1,2,3,4-tetra-hydro-isoquinolin-3-yl]methanol 2.33-hydrate.

Authors:  Sai Kumar Chakka; Michael G McKay; Thavendran Govender; Hendrik G Kruger; Glenn E M Maguire
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-23

3.  (3S)-2-Benzyl-3-carb-oxy-1,2,3,4-tetra-hydro-isoquinolinium chloride monohydrate.

Authors:  Tricia Naicker; Thavendran Govender; Hendrik G Kruger; Glenn E M Maguire
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-24
  3 in total

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