| Literature DB >> 21522778 |
Tricia Naicker, Thavendran Govender, Hendrik G Kruger, Glenn E M Maguire.
Abstract
The structure of the title compound, C(18)H(20)N(2)O, at 173 K has hexa-gonal (P6(1)) symmetry. The N-containing six-membered ring assumes a half-chair conformation. In the crystal, inter-molecular N-H⋯O hydrogen bonding via the amide groups cross-link the mol-ecules along the a axis. The absolute configuration was confirmed by 2D NMR studies.Entities:
Year: 2010 PMID: 21522778 PMCID: PMC3050362 DOI: 10.1107/S1600536810050361
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H20N2O | |
| Melting point: 365 K | |
| Hexagonal, | Mo |
| Hall symbol: P 61 | Cell parameters from 18777 reflections |
| θ = 2.3–27.2° | |
| µ = 0.08 mm−1 | |
| Needle, colourless | |
| 0.22 × 0.12 × 0.03 mm |
| Bruker Kappa DUO APEXII diffractometer | 1358 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.2°, θmin = 2.3° |
| 0.5° φ scans and ω scans | |
| 18777 measured reflections | |
| 1759 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 1759 reflections | Δρmax = 0.14 e Å−3 |
| 195 parameters | Δρmin = −0.14 e Å−3 |
| 2 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0033 (7) |
| Experimental. Half sphere of data collected using |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.73695 (19) | 0.77313 (19) | 0.97396 (7) | 0.0450 (5) | |
| N1 | 0.9118 (2) | 1.1026 (2) | 0.98992 (8) | 0.0385 (5) | |
| N2 | 0.7085 (2) | 0.8382 (2) | 0.89310 (8) | 0.0362 (5) | |
| H2 | 0.747 (3) | 0.915 (2) | 0.8671 (9) | 0.051 (8)* | |
| C1 | 1.0391 (3) | 1.2586 (3) | 0.98885 (11) | 0.0465 (7) | |
| H1A | 1.0402 | 1.3099 | 1.0214 | 0.056* | |
| H1B | 1.0241 | 1.3139 | 0.9602 | 0.056* | |
| C2 | 1.1898 (3) | 1.2671 (3) | 0.98225 (10) | 0.0406 (6) | |
| C3 | 1.3244 (4) | 1.4003 (3) | 0.99539 (12) | 0.0537 (8) | |
| H3 | 1.3197 | 1.4848 | 1.0087 | 0.064* | |
| C4 | 1.4632 (3) | 1.4096 (3) | 0.98919 (13) | 0.0595 (8) | |
| H4 | 1.5535 | 1.4999 | 0.9984 | 0.071* | |
| C5 | 1.4714 (3) | 1.2876 (4) | 0.96964 (13) | 0.0581 (8) | |
| H5 | 1.5671 | 1.2941 | 0.9652 | 0.070* | |
| C6 | 1.3402 (3) | 1.1566 (3) | 0.95657 (11) | 0.0463 (7) | |
| H6 | 1.3461 | 1.0725 | 0.9436 | 0.056* | |
| C7 | 1.1987 (3) | 1.1457 (3) | 0.96216 (10) | 0.0374 (6) | |
| C8 | 1.0561 (3) | 1.0021 (3) | 0.94725 (11) | 0.0378 (6) | |
| H8A | 1.0356 | 0.9225 | 0.9730 | 0.045* | |
| H8B | 1.0718 | 0.9668 | 0.9135 | 0.045* | |
| C9 | 0.9188 (3) | 1.0240 (3) | 0.94379 (10) | 0.0345 (5) | |
| H9 | 0.9283 | 1.0859 | 0.9126 | 0.041* | |
| C10 | 0.7785 (3) | 0.8671 (3) | 0.93857 (10) | 0.0343 (5) | |
| C11 | 0.5866 (3) | 0.6863 (3) | 0.87851 (10) | 0.0393 (6) | |
| H11A | 0.5110 | 0.6958 | 0.8573 | 0.047* | |
| H11B | 0.5349 | 0.6288 | 0.9100 | 0.047* | |
| C12 | 0.6459 (3) | 0.6001 (3) | 0.84871 (9) | 0.0373 (6) | |
| C13 | 0.7331 (4) | 0.5489 (4) | 0.87268 (12) | 0.0623 (9) | |
| H13 | 0.7528 | 0.5655 | 0.9085 | 0.075* | |
| C14 | 0.7920 (4) | 0.4739 (4) | 0.84516 (14) | 0.0685 (10) | |
| H14 | 0.8523 | 0.4402 | 0.8622 | 0.082* | |
| C15 | 0.7643 (4) | 0.4478 (4) | 0.79358 (13) | 0.0615 (9) | |
| H15 | 0.8053 | 0.3967 | 0.7747 | 0.074* | |
| C16 | 0.6769 (4) | 0.4962 (4) | 0.76946 (13) | 0.0680 (10) | |
| H16 | 0.6565 | 0.4782 | 0.7337 | 0.082* | |
| C17 | 0.6180 (4) | 0.5713 (3) | 0.79703 (12) | 0.0529 (7) | |
| H17 | 0.5568 | 0.6037 | 0.7798 | 0.063* | |
| C18 | 0.7705 (3) | 1.1059 (4) | 0.99296 (14) | 0.0573 (8) | |
| H18A | 0.6846 | 1.0019 | 0.9935 | 0.086* | |
| H18B | 0.7619 | 1.1594 | 0.9629 | 0.086* | |
| H18C | 0.7700 | 1.1586 | 1.0245 | 0.086* |
| O1 | 0.0379 (9) | 0.0402 (10) | 0.0409 (10) | 0.0076 (8) | −0.0062 (8) | 0.0136 (8) |
| N1 | 0.0387 (12) | 0.0377 (11) | 0.0414 (12) | 0.0208 (10) | 0.0035 (9) | 0.0012 (9) |
| N2 | 0.0370 (11) | 0.0366 (11) | 0.0349 (11) | 0.0183 (9) | −0.0024 (9) | 0.0071 (9) |
| C1 | 0.0571 (16) | 0.0354 (14) | 0.0488 (16) | 0.0245 (13) | −0.0015 (13) | −0.0017 (12) |
| C2 | 0.0453 (14) | 0.0287 (12) | 0.0408 (14) | 0.0133 (11) | −0.0010 (12) | 0.0058 (11) |
| C3 | 0.065 (2) | 0.0303 (14) | 0.0522 (18) | 0.0137 (14) | −0.0029 (14) | 0.0044 (12) |
| C4 | 0.0422 (16) | 0.0433 (16) | 0.065 (2) | 0.0006 (13) | −0.0056 (15) | 0.0107 (15) |
| C5 | 0.0371 (15) | 0.0565 (18) | 0.067 (2) | 0.0128 (14) | −0.0042 (14) | 0.0108 (16) |
| C6 | 0.0365 (14) | 0.0439 (15) | 0.0532 (17) | 0.0162 (12) | 0.0031 (12) | 0.0094 (13) |
| C7 | 0.0381 (13) | 0.0290 (12) | 0.0388 (13) | 0.0121 (11) | 0.0011 (11) | 0.0073 (11) |
| C8 | 0.0336 (12) | 0.0299 (12) | 0.0459 (14) | 0.0130 (11) | 0.0036 (11) | −0.0001 (11) |
| C9 | 0.0349 (13) | 0.0321 (12) | 0.0340 (12) | 0.0149 (10) | 0.0029 (10) | 0.0071 (10) |
| C10 | 0.0315 (12) | 0.0360 (13) | 0.0356 (13) | 0.0170 (10) | 0.0005 (10) | 0.0067 (10) |
| C11 | 0.0295 (13) | 0.0442 (14) | 0.0403 (14) | 0.0156 (11) | −0.0071 (11) | 0.0036 (11) |
| C12 | 0.0300 (12) | 0.0325 (13) | 0.0375 (14) | 0.0067 (10) | 0.0004 (11) | 0.0021 (11) |
| C13 | 0.073 (2) | 0.097 (3) | 0.0420 (17) | 0.061 (2) | −0.0073 (15) | −0.0093 (16) |
| C14 | 0.069 (2) | 0.089 (3) | 0.067 (2) | 0.054 (2) | −0.0099 (18) | −0.0217 (19) |
| C15 | 0.0525 (18) | 0.0532 (18) | 0.064 (2) | 0.0151 (15) | 0.0066 (16) | −0.0209 (16) |
| C16 | 0.085 (3) | 0.0545 (19) | 0.0404 (16) | 0.0168 (18) | −0.0052 (17) | −0.0131 (15) |
| C17 | 0.0631 (19) | 0.0404 (15) | 0.0440 (16) | 0.0174 (14) | −0.0140 (14) | −0.0050 (13) |
| C18 | 0.0526 (17) | 0.067 (2) | 0.065 (2) | 0.0395 (16) | 0.0052 (15) | −0.0012 (16) |
| O1—C10 | 1.239 (3) | C8—H8A | 0.9900 |
| N1—C18 | 1.458 (3) | C8—H8B | 0.9900 |
| N1—C9 | 1.462 (3) | C9—C10 | 1.527 (3) |
| N1—C1 | 1.465 (3) | C9—H9 | 1.0000 |
| N2—C10 | 1.334 (3) | C11—C12 | 1.504 (4) |
| N2—C11 | 1.469 (3) | C11—H11A | 0.9900 |
| N2—H2 | 0.957 (10) | C11—H11B | 0.9900 |
| C1—C2 | 1.503 (4) | C12—C17 | 1.373 (4) |
| C1—H1A | 0.9900 | C12—C13 | 1.383 (4) |
| C1—H1B | 0.9900 | C13—C14 | 1.383 (4) |
| C2—C7 | 1.386 (4) | C13—H13 | 0.9500 |
| C2—C3 | 1.406 (4) | C14—C15 | 1.367 (5) |
| C3—C4 | 1.378 (4) | C14—H14 | 0.9500 |
| C3—H3 | 0.9500 | C15—C16 | 1.365 (5) |
| C4—C5 | 1.382 (5) | C15—H15 | 0.9500 |
| C4—H4 | 0.9500 | C16—C17 | 1.385 (5) |
| C5—C6 | 1.377 (4) | C16—H16 | 0.9500 |
| C5—H5 | 0.9500 | C17—H17 | 0.9500 |
| C6—C7 | 1.396 (4) | C18—H18A | 0.9800 |
| C6—H6 | 0.9500 | C18—H18B | 0.9800 |
| C7—C8 | 1.508 (4) | C18—H18C | 0.9800 |
| C8—C9 | 1.524 (3) | ||
| C18—N1—C9 | 112.1 (2) | C8—C9—C10 | 107.39 (19) |
| C18—N1—C1 | 109.0 (2) | N1—C9—H9 | 109.5 |
| C9—N1—C1 | 108.61 (19) | C8—C9—H9 | 109.5 |
| C10—N2—C11 | 122.5 (2) | C10—C9—H9 | 109.5 |
| C10—N2—H2 | 119.4 (18) | O1—C10—N2 | 123.2 (2) |
| C11—N2—H2 | 117.6 (18) | O1—C10—C9 | 121.5 (2) |
| N1—C1—C2 | 112.9 (2) | N2—C10—C9 | 115.3 (2) |
| N1—C1—H1A | 109.0 | N2—C11—C12 | 111.9 (2) |
| C2—C1—H1A | 109.0 | N2—C11—H11A | 109.2 |
| N1—C1—H1B | 109.0 | C12—C11—H11A | 109.2 |
| C2—C1—H1B | 109.0 | N2—C11—H11B | 109.2 |
| H1A—C1—H1B | 107.8 | C12—C11—H11B | 109.2 |
| C7—C2—C3 | 119.0 (3) | H11A—C11—H11B | 107.9 |
| C7—C2—C1 | 120.8 (2) | C17—C12—C13 | 117.6 (3) |
| C3—C2—C1 | 120.2 (3) | C17—C12—C11 | 121.8 (3) |
| C4—C3—C2 | 120.6 (3) | C13—C12—C11 | 120.6 (2) |
| C4—C3—H3 | 119.7 | C12—C13—C14 | 120.9 (3) |
| C2—C3—H3 | 119.7 | C12—C13—H13 | 119.5 |
| C3—C4—C5 | 120.1 (3) | C14—C13—H13 | 119.5 |
| C3—C4—H4 | 119.9 | C15—C14—C13 | 120.6 (3) |
| C5—C4—H4 | 119.9 | C15—C14—H14 | 119.7 |
| C6—C5—C4 | 119.7 (3) | C13—C14—H14 | 119.7 |
| C6—C5—H5 | 120.2 | C16—C15—C14 | 119.2 (3) |
| C4—C5—H5 | 120.2 | C16—C15—H15 | 120.4 |
| C5—C6—C7 | 121.0 (3) | C14—C15—H15 | 120.4 |
| C5—C6—H6 | 119.5 | C15—C16—C17 | 120.2 (3) |
| C7—C6—H6 | 119.5 | C15—C16—H16 | 119.9 |
| C2—C7—C6 | 119.6 (2) | C17—C16—H16 | 119.9 |
| C2—C7—C8 | 120.0 (2) | C12—C17—C16 | 121.5 (3) |
| C6—C7—C8 | 120.4 (2) | C12—C17—H17 | 119.3 |
| C7—C8—C9 | 112.5 (2) | C16—C17—H17 | 119.3 |
| C7—C8—H8A | 109.1 | N1—C18—H18A | 109.5 |
| C9—C8—H8A | 109.1 | N1—C18—H18B | 109.5 |
| C7—C8—H8B | 109.1 | H18A—C18—H18B | 109.5 |
| C9—C8—H8B | 109.1 | N1—C18—H18C | 109.5 |
| H8A—C8—H8B | 107.8 | H18A—C18—H18C | 109.5 |
| N1—C9—C8 | 109.34 (19) | H18B—C18—H18C | 109.5 |
| N1—C9—C10 | 111.7 (2) | ||
| C18—N1—C1—C2 | −176.3 (2) | C1—N1—C9—C10 | −172.63 (19) |
| C9—N1—C1—C2 | −53.9 (3) | C7—C8—C9—N1 | −48.2 (3) |
| N1—C1—C2—C7 | 20.3 (4) | C7—C8—C9—C10 | −169.6 (2) |
| N1—C1—C2—C3 | −161.2 (2) | C11—N2—C10—O1 | −7.5 (4) |
| C7—C2—C3—C4 | −1.0 (4) | C11—N2—C10—C9 | 170.4 (2) |
| C1—C2—C3—C4 | −179.6 (3) | N1—C9—C10—O1 | −53.7 (3) |
| C2—C3—C4—C5 | 0.4 (5) | C8—C9—C10—O1 | 66.2 (3) |
| C3—C4—C5—C6 | −0.2 (5) | N1—C9—C10—N2 | 128.3 (2) |
| C4—C5—C6—C7 | 0.8 (4) | C8—C9—C10—N2 | −111.8 (2) |
| C3—C2—C7—C6 | 1.6 (4) | C10—N2—C11—C12 | −94.2 (3) |
| C1—C2—C7—C6 | −179.9 (2) | N2—C11—C12—C17 | −109.0 (3) |
| C3—C2—C7—C8 | −179.4 (2) | N2—C11—C12—C13 | 70.0 (3) |
| C1—C2—C7—C8 | −0.8 (4) | C17—C12—C13—C14 | 1.2 (5) |
| C5—C6—C7—C2 | −1.5 (4) | C11—C12—C13—C14 | −177.9 (3) |
| C5—C6—C7—C8 | 179.4 (3) | C12—C13—C14—C15 | −0.4 (6) |
| C2—C7—C8—C9 | 14.7 (3) | C13—C14—C15—C16 | −0.3 (5) |
| C6—C7—C8—C9 | −166.2 (2) | C14—C15—C16—C17 | 0.3 (5) |
| C18—N1—C9—C8 | −170.9 (2) | C13—C12—C17—C16 | −1.1 (4) |
| C1—N1—C9—C8 | 68.7 (2) | C11—C12—C17—C16 | 177.9 (3) |
| C18—N1—C9—C10 | −52.2 (3) | C15—C16—C17—C12 | 0.4 (5) |
| H··· | ||||
| N2—H2···O1i | 0.96 (2) | 1.92 (2) | 2.852 (3) | 165 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O1i | 0.96 (2) | 1.92 (2) | 2.852 (3) | 165 (3) |
Symmetry code: (i) .