Literature DB >> 21587684

Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')nickel(II) propane-1,3-diol solvate.

Chao Ni1, Kai-Long Zhong, Jiang-Dong Cui.   

Abstract

In the structure of the title compound, [Ni(SO(4))(C(12)H(8)N(2))(2)]·C(3)H(8)O(2), the Ni(II) ion (site symmetry 2) is six-coordinated in a distorted octa-hedral manner by four N atoms from two chelating n class="Chemical">1,10-phenanthroline (phen) ligands and two O atoms from a bidentate sulfate ligand (2 symmetry). The dihedral angle between the two chelating NCCN groups is 80.9 (1)°. The central C atom of the propane-1,3-diol solvent mol-ecule is likewise located on a twofold rotation axis. In the crystal structure, the [Ni(SO(4))(C(12)H(8)N(2))(2)] and C(3)H(8)O(2) entities are connected through inter-molecular O-H⋯O hydrogen bonding.

Entities:  

Year:  2010        PMID: 21587684      PMCID: PMC3006809          DOI: 10.1107/S1600536810020210

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isotypic Zn and Co structures, see: Cui et al. (2010 ▶) and Zhong (2010 ▶), respectively. For the ethane-1,2-diol solvate of the title complex, see: Zhong et al. (2009 ▶). For background to coordination polymers constructed from N-containing ligands, see: Zhang et al. (1999 ▶); Blake et al. (2007 ▶); Wang et al. (2007 ▶).

Experimental

Crystal data

[Ni(SO4)(C12H8N2)2]·C3H8O2 M = 591.26 Monoclinic, a = 18.243 (4) Å b = 12.440 (3) Å c = 13.180 (3) Å β = 121.58 (3)° V = 2548.2 (13) Å3 Z = 4 Mo Kα radiation μ = 0.90 mm−1 T = 223 K 0.55 × 0.50 × 0.40 mm

Data collection

Rigaku Mercury CCD diffractometer Absorption correction: multi-scan (REQAB: Jacobson, 1998 ▶) T min = 0.750, T max = 1.000 7078 measured reflections 2877 independent reflections 2630 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.093 S = 1.05 2877 reflections 179 parameters H-atom parameters constrained Δρmax = 0.79 e Å−3 Δρmin = −0.42 e Å−3 Data collection: CrystalClear (Rigaku, 2007 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810020210/wm2347sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810020210/wm2347Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(SO4)(C12H8N2)2]·C3H8O2F(000) = 1224
Mr = 591.26Dx = 1.541 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 6113 reflections
a = 18.243 (4) Åθ = 3.2–27.5°
b = 12.440 (3) ŵ = 0.90 mm1
c = 13.180 (3) ÅT = 223 K
β = 121.58 (3)°Block, blue
V = 2548.2 (13) Å30.55 × 0.50 × 0.40 mm
Z = 4
Rigaku Mercury CCD diffractometer2877 independent reflections
Radiation source: fine-focus sealed tube2630 reflections with I > 2σ(I)
Graphite MonochromatorRint = 0.017
Detector resolution: 28.5714 pixels mm-1θmax = 27.5°, θmin = 3.2°
ω scansh = −23→23
Absorption correction: multi-scan (REQAB: Jacobson, 1998)k = −16→13
Tmin = 0.750, Tmax = 1.000l = −16→17
7078 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H-atom parameters constrained
wR(F2) = 0.093w = 1/[σ2(Fo2) + (0.0574P)2 + 1.7246P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2877 reflectionsΔρmax = 0.79 e Å3
179 parametersΔρmin = −0.42 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0115 (8)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.50000.31623 (2)0.25000.02219 (13)
S10.50000.53132 (5)0.25000.02350 (16)
O10.44210 (8)0.45725 (10)0.15044 (11)0.0300 (3)
O20.44999 (10)0.59777 (13)0.28297 (15)0.0422 (4)
N10.40871 (10)0.20994 (12)0.12675 (13)0.0245 (3)
N20.41995 (10)0.30246 (12)0.31754 (14)0.0252 (3)
C20.33170 (14)0.10453 (17)−0.05175 (18)0.0351 (4)
H2A0.32820.0788−0.12040.042*
C60.22391 (12)0.13600 (17)0.21208 (18)0.0345 (4)
H6A0.18430.11780.23340.041*
C70.29358 (12)0.20714 (16)0.28623 (17)0.0289 (4)
C90.37020 (14)0.32691 (16)0.45183 (18)0.0354 (4)
H9A0.37740.36020.51970.043*
C50.21523 (12)0.09508 (16)0.11125 (18)0.0338 (4)
H5A0.16850.05090.06300.041*
C40.27619 (11)0.11813 (14)0.07706 (16)0.0275 (4)
C100.42736 (12)0.34793 (16)0.41402 (17)0.0303 (4)
H10A0.47250.39560.45800.036*
C80.30380 (13)0.25725 (17)0.38851 (17)0.0356 (4)
H8A0.26530.24290.41290.043*
C10.40052 (13)0.17061 (15)0.02734 (17)0.0305 (4)
H1A0.44220.18770.00960.037*
C110.35423 (11)0.23219 (13)0.25508 (15)0.0239 (3)
C30.26998 (13)0.07832 (15)−0.02736 (17)0.0325 (4)
H3A0.22410.0345−0.07920.039*
C120.34677 (11)0.18502 (13)0.15061 (16)0.0233 (3)
C140.4235 (2)0.8716 (3)0.2220 (3)0.0797 (10)
H14A0.37380.91770.19520.096*
H14B0.41110.82300.15740.096*
C130.50000.9397 (3)0.25000.0588 (10)
O30.43615 (17)0.81214 (15)0.3188 (2)0.0711 (7)
H30.44030.74830.30720.107*
H130.51460.98590.31690.085*
U11U22U33U12U13U23
Ni10.02047 (18)0.01993 (18)0.02456 (19)0.0000.01067 (14)0.000
S10.0196 (3)0.0197 (3)0.0300 (3)0.0000.0122 (2)0.000
O10.0245 (6)0.0261 (6)0.0273 (7)−0.0002 (5)0.0052 (5)0.0017 (5)
O20.0377 (8)0.0369 (8)0.0568 (10)0.0089 (6)0.0281 (8)−0.0045 (7)
N10.0259 (7)0.0216 (7)0.0257 (7)−0.0002 (6)0.0132 (6)−0.0002 (6)
N20.0236 (7)0.0236 (7)0.0268 (7)0.0003 (6)0.0120 (6)−0.0008 (6)
C20.0418 (11)0.0340 (10)0.0274 (9)−0.0021 (9)0.0167 (9)−0.0068 (8)
C60.0268 (9)0.0398 (11)0.0372 (10)−0.0050 (8)0.0170 (8)0.0041 (9)
C70.0250 (8)0.0324 (9)0.0285 (9)0.0016 (7)0.0134 (8)0.0045 (7)
C90.0417 (11)0.0384 (11)0.0291 (9)0.0038 (9)0.0205 (9)−0.0027 (8)
C50.0251 (9)0.0339 (10)0.0342 (10)−0.0075 (8)0.0099 (8)−0.0005 (8)
C40.0251 (8)0.0243 (8)0.0262 (8)−0.0013 (7)0.0086 (7)0.0017 (7)
C100.0307 (9)0.0288 (9)0.0279 (9)0.0002 (7)0.0129 (8)−0.0044 (7)
C80.0343 (10)0.0455 (12)0.0333 (10)0.0005 (9)0.0221 (9)0.0024 (9)
C10.0343 (10)0.0290 (9)0.0304 (9)−0.0015 (8)0.0186 (8)−0.0019 (7)
C110.0216 (8)0.0223 (8)0.0238 (8)0.0016 (6)0.0092 (7)0.0024 (7)
C30.0321 (10)0.0280 (9)0.0276 (9)−0.0054 (7)0.0089 (8)−0.0050 (7)
C120.0222 (8)0.0202 (8)0.0243 (8)0.0004 (6)0.0100 (7)0.0023 (6)
C140.077 (2)0.081 (2)0.080 (2)0.0248 (19)0.0404 (19)0.0057 (19)
C130.091 (3)0.0280 (15)0.070 (2)0.0000.051 (2)0.000
O30.1204 (19)0.0423 (10)0.0973 (16)0.0019 (10)0.0895 (16)−0.0033 (10)
Ni1—N2i2.0775 (16)C7—C111.402 (3)
Ni1—N22.0775 (16)C7—C81.406 (3)
Ni1—N12.0802 (16)C9—C81.362 (3)
Ni1—N1i2.0802 (16)C9—C101.396 (3)
Ni1—O1i2.1127 (14)C9—H9A0.9300
Ni1—O12.1127 (14)C5—C41.431 (3)
Ni1—S12.6758 (9)C5—H5A0.9300
S1—O2i1.4559 (14)C4—C121.408 (2)
S1—O21.4559 (14)C4—C31.410 (3)
S1—O11.4950 (14)C10—H10A0.9300
S1—O1i1.4950 (14)C8—H8A0.9300
N1—C11.332 (2)C1—H1A0.9300
N1—C121.358 (2)C11—C121.436 (2)
N2—C101.332 (2)C3—H3A0.9300
N2—C111.359 (2)C14—O31.384 (4)
C2—C31.362 (3)C14—C131.505 (4)
C2—C11.403 (3)C14—H14A0.9700
C2—H2A0.9300C14—H14B0.9700
C6—C51.353 (3)C13—C14i1.505 (4)
C6—C71.433 (3)C13—H130.9659
C6—H6A0.9300O3—H30.8200
N2i—Ni1—N2170.54 (8)C5—C6—H6A119.7
N2i—Ni1—N193.90 (6)C7—C6—H6A119.7
N2—Ni1—N180.05 (6)C11—C7—C8116.97 (17)
N2i—Ni1—N1i80.05 (6)C11—C7—C6119.45 (18)
N2—Ni1—N1i93.90 (6)C8—C7—C6123.55 (18)
N1—Ni1—N1i101.07 (9)C8—C9—C10119.43 (18)
N2i—Ni1—O1i95.71 (6)C8—C9—H9A120.3
N2—Ni1—O1i92.14 (6)C10—C9—H9A120.3
N1—Ni1—O1i161.48 (5)C6—C5—C4121.57 (18)
N1i—Ni1—O1i96.16 (6)C6—C5—H5A119.2
N2i—Ni1—O192.14 (6)C4—C5—H5A119.2
N2—Ni1—O195.71 (6)C12—C4—C3117.17 (17)
N1—Ni1—O196.16 (6)C12—C4—C5118.88 (17)
N1i—Ni1—O1161.48 (5)C3—C4—C5123.95 (17)
O1i—Ni1—O167.73 (7)N2—C10—C9122.67 (18)
N2i—Ni1—S194.73 (4)N2—C10—H10A118.7
N2—Ni1—S194.73 (4)C9—C10—H10A118.7
N1—Ni1—S1129.47 (4)C9—C8—C7119.88 (18)
N1i—Ni1—S1129.47 (4)C9—C8—H8A120.1
O1i—Ni1—S133.86 (4)C7—C8—H8A120.1
O1—Ni1—S133.86 (4)N1—C1—C2122.82 (18)
O2i—S1—O2110.81 (14)N1—C1—H1A118.6
O2i—S1—O1110.68 (9)C2—C1—H1A118.6
O2—S1—O1110.29 (8)N2—C11—C7123.16 (16)
O2i—S1—O1i110.29 (8)N2—C11—C12117.02 (15)
O2—S1—O1i110.68 (9)C7—C11—C12119.80 (16)
O1—S1—O1i103.90 (11)C2—C3—C4119.49 (18)
O2i—S1—Ni1124.60 (7)C2—C3—H3A120.3
O2—S1—Ni1124.60 (7)C4—C3—H3A120.3
O1—S1—Ni151.95 (5)N1—C12—C4123.17 (17)
O1i—S1—Ni151.95 (5)N1—C12—C11117.15 (15)
S1—O1—Ni194.19 (7)C4—C12—C11119.66 (16)
C1—N1—C12117.76 (16)O3—C14—C13112.9 (3)
C1—N1—Ni1129.29 (13)O3—C14—H14A109.0
C12—N1—Ni1112.78 (12)C13—C14—H14A109.0
C10—N2—C11117.89 (16)O3—C14—H14B109.0
C10—N2—Ni1129.14 (13)C13—C14—H14B109.0
C11—N2—Ni1112.88 (12)H14A—C14—H14B107.8
C3—C2—C1119.57 (18)C14—C13—C14i111.4 (3)
C3—C2—H2A120.2C14—O3—H3109.5
C1—C2—H2A120.2C14—O3—H1351.3
C5—C6—C7120.55 (18)H3—O3—H13134.4
N2i—Ni1—S1—O2i−3.49 (9)O1—Ni1—N2—C10−85.94 (16)
N2—Ni1—S1—O2i176.51 (9)S1—Ni1—N2—C10−51.94 (16)
N1—Ni1—S1—O2i−102.49 (10)N1—Ni1—N2—C112.48 (12)
N1i—Ni1—S1—O2i77.51 (10)N1i—Ni1—N2—C11−98.09 (12)
O1i—Ni1—S1—O2i89.72 (10)O1i—Ni1—N2—C11165.58 (12)
O1—Ni1—S1—O2i−90.28 (10)O1—Ni1—N2—C1197.75 (12)
N2i—Ni1—S1—O2176.51 (9)S1—Ni1—N2—C11131.75 (11)
N2—Ni1—S1—O2−3.49 (9)C5—C6—C7—C11−1.5 (3)
N1—Ni1—S1—O277.51 (10)C5—C6—C7—C8176.34 (19)
N1i—Ni1—S1—O2−102.49 (10)C7—C6—C5—C42.1 (3)
O1i—Ni1—S1—O2−90.28 (10)C6—C5—C4—C120.0 (3)
O1—Ni1—S1—O289.72 (10)C6—C5—C4—C3−179.52 (19)
N2i—Ni1—S1—O186.79 (8)C11—N2—C10—C9−0.7 (3)
N2—Ni1—S1—O1−93.21 (8)Ni1—N2—C10—C9−176.81 (14)
N1—Ni1—S1—O1−12.21 (8)C8—C9—C10—N20.0 (3)
N1i—Ni1—S1—O1167.79 (8)C10—C9—C8—C70.1 (3)
O1i—Ni1—S1—O1180.0C11—C7—C8—C90.3 (3)
N2i—Ni1—S1—O1i−93.21 (8)C6—C7—C8—C9−177.63 (19)
N2—Ni1—S1—O1i86.79 (8)C12—N1—C1—C2−0.6 (3)
N1—Ni1—S1—O1i167.79 (8)Ni1—N1—C1—C2−175.62 (14)
N1i—Ni1—S1—O1i−12.21 (8)C3—C2—C1—N1−0.1 (3)
O1—Ni1—S1—O1i180.0C10—N2—C11—C71.2 (3)
O2i—S1—O1—Ni1118.37 (8)Ni1—N2—C11—C7177.92 (13)
O2—S1—O1—Ni1−118.64 (8)C10—N2—C11—C12179.30 (15)
O1i—S1—O1—Ni10.0Ni1—N2—C11—C12−3.94 (19)
N2i—Ni1—O1—S1−95.30 (7)C8—C7—C11—N2−1.0 (3)
N2—Ni1—O1—S189.97 (7)C6—C7—C11—N2177.04 (17)
N1—Ni1—O1—S1170.54 (6)C8—C7—C11—C12−179.08 (16)
N1i—Ni1—O1—S1−31.0 (2)C6—C7—C11—C12−1.1 (3)
O1i—Ni1—O1—S10.0C1—C2—C3—C40.0 (3)
N2i—Ni1—N1—C1−12.76 (16)C12—C4—C3—C20.8 (3)
N2—Ni1—N1—C1174.57 (17)C5—C4—C3—C2−179.67 (19)
N1i—Ni1—N1—C1−93.37 (16)C1—N1—C12—C41.5 (3)
O1i—Ni1—N1—C1108.4 (2)Ni1—N1—C12—C4177.32 (13)
O1—Ni1—N1—C179.82 (16)C1—N1—C12—C11−177.07 (16)
S1—Ni1—N1—C186.63 (16)Ni1—N1—C12—C11−1.27 (18)
N2i—Ni1—N1—C12172.05 (12)C3—C4—C12—N1−1.6 (3)
N2—Ni1—N1—C12−0.63 (11)C5—C4—C12—N1178.81 (16)
N1i—Ni1—N1—C1291.44 (12)C3—C4—C12—C11176.96 (16)
O1i—Ni1—N1—C12−66.8 (2)C5—C4—C12—C11−2.6 (2)
O1—Ni1—N1—C12−95.37 (12)N2—C11—C12—N13.6 (2)
S1—Ni1—N1—C12−88.56 (12)C7—C11—C12—N1−178.23 (15)
N1—Ni1—N2—C10178.78 (17)N2—C11—C12—C4−175.08 (15)
N1i—Ni1—N2—C1078.21 (16)C7—C11—C12—C43.1 (2)
O1i—Ni1—N2—C10−18.11 (16)O3—C14—C13—C14i65.6 (2)
D—H···AD—HH···AD···AD—H···A
O3—H3···O2i0.821.922.743 (2)179
Ni1—N22.0775 (16)
Ni1—N12.0802 (16)
Ni1—O12.1127 (14)
S1—O21.4559 (14)
S1—O11.4950 (14)
N2—Ni1—N180.05 (6)
O1i—Ni1—O167.73 (7)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O20.821.922.743 (2)179
  5 in total

1.  (1,3-Dimethylimidazolidine-2-selone-kappaSe)bis(1,10-phenanthroline-kappa2N,N')copper(II) bis(perchlorate) and bis(2,2'-bipyridyl-kappa2N,N')(imidazolidine-2-thione-kappaS)copper(II) bis(perchlorate).

Authors:  Alexander J Blake; Vito Lippolis; Tiziana Pivetta; Gaetano Verani
Journal:  Acta Crystallogr C       Date:  2007-07-14       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')nickel(II) ethane-1,2-diol solvate.

Authors:  Kai-Long Zhong; Chao Ni; Jian-Mei Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-11

4.  Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')cobalt(II) propane-1,3-diol solvate.

Authors:  Kai-Long Zhong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-03

5.  Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')zinc(II) propane-1,3-diol solvate.

Authors:  Jiang-Dong Cui; Kai-Long Zhong; Yan-Yun Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-24
  5 in total
  6 in total

1.  Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')cadmium(II) propane-1,3-diol solvate.

Authors:  Kai-Long Zhong; Jiang-Dong Cui
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-18

2.  Diaqua-bis-(1,10-phenanthroline-κN,N')cadmium sulfate hexa-hydrate.

Authors:  Kai-Long Zhong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-29

3.  Tris(1,10-phenanthroline-κN,N')nickel(II) bis-(2,4,5-tricarb-oxy-benzo-ate) monohydrate.

Authors:  Kai-Long Zhong; Chao Ni; Ming-Yi Qian
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-23

4.  Bis(1,10-phenanthroline-κN,N')(sulfato-O)copper(II) ethane-1,2-diol monosolvate.

Authors:  Kai-Long Zhong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-11

5.  Bis(1,10-phenanthroline-κ(2) N,N')(sulfato-κ(2) O,O')nickel(II) butane-2,3-diol monosolvate.

Authors:  Kai-Long Zhong; Chao Ni
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-24

6.  Bis(1,10-phenanthroline-κ(2) N,N')(sulfato-κ(2) O,O')nickel(II) propane-1,2-diol monosolvate.

Authors:  Kai-Long Zhong; Cheng-Xian Duan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-21
  6 in total

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