Literature DB >> 23468730

Bis(1,10-phenanthroline-κ(2) N,N')(sulfato-κ(2) O,O')nickel(II) butane-2,3-diol monosolvate.

Kai-Long Zhong1, Chao Ni.   

Abstract

In the title compound, [Ni(SO4)(C12n class="Species">H8N2)2]·C4H10O2, the Ni(II) ion is six-coordinated by four N atoms from two chelating 1,10-phenanthroline ligands and two O atoms from an O,O'-bidentate sulfate anion, resulting in a distorted octa-hedral geometry for the metal ion. The dihedral angle between the two chelating N2C2 groups is 83.82 (12)°. The Ni(II) ion, the S atom and the mid-point of the central C-C bond of the butane-2,3-diol solvent mol-ecule lie on a twofold rotation axis. In the crystal, the complex mol-ecules and solvent mol-ecules are held together by pairs of symmetry-related Odiol-H⋯Osulfate hydrogen bonds involving the uncoordinating O atoms of the sulfate ions. The solvent mol-ecule is disordered over two sets of sites with site occupancies of 0.450 (9) and 0.550 (9).

Entities:  

Year:  2012        PMID: 23468730      PMCID: PMC3588765          DOI: 10.1107/S1600536812047241

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the ethane-1,2-diol analog of the title complex, see: Zhong et al. (2009 ▶). For the propane-1,3-diol analog of the title complex, see: Ni et al. (2010 ▶). For an isotypic structure, see: Wang & Zhong (2011 ▶).

Experimental

Crystal data

[Ni(SO4)(C12H8N2)2]·C4H10O2 M = 605.29 Monoclinic, a = 18.147 (4) Å b = 13.051 (3) Å c = 13.259 (3) Å β = 122.43 (3)° V = 2650.5 (14) Å3 Z = 4 Mo Kα radiation μ = 0.86 mm−1 T = 223 K 0.35 × 0.30 × 0.20 mm

Data collection

Rigaku Mercury CCD diffractometer Absorption correction: multi-scan (REQAB: Jacobson, 1998 ▶) T min = 0.736, T max = 1.000 6326 measured reflections 2325 independent reflections 1964 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.108 S = 1.14 2325 reflections 210 parameters 56 restraints H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.39 e Å−3 Data collection: CrystalClear (Rigaku, 2007 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812047241/mw2096sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812047241/mw2096Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(SO4)(C12H8N2)2]·C4H10O2F(000) = 1256
Mr = 605.29Dx = 1.517 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 5284 reflections
a = 18.147 (4) Åθ = 3.1–25.0°
b = 13.051 (3) ŵ = 0.86 mm1
c = 13.259 (3) ÅT = 223 K
β = 122.43 (3)°Block, blue
V = 2650.5 (14) Å30.35 × 0.30 × 0.20 mm
Z = 4
Rigaku Mercury CCD diffractometer2325 independent reflections
Radiation source: fine-focus sealed tube1964 reflections with I > 2σ(I)
Graphite Monochromator monochromatorRint = 0.035
Detector resolution: 28.5714 pixels mm-1θmax = 25.0°, θmin = 3.2°
ω scansh = −21→19
Absorption correction: multi-scan (REQAB: Jacobson, 1998)k = −15→14
Tmin = 0.736, Tmax = 1.000l = −13→15
6326 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.108H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0472P)2 + 2.5256P] where P = (Fo2 + 2Fc2)/3
2325 reflections(Δ/σ)max = 0.006
210 parametersΔρmax = 0.39 e Å3
56 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Ni10.50000.32087 (4)0.25000.0327 (2)
S10.50000.52556 (8)0.25000.0338 (3)
O10.56037 (14)0.45442 (17)0.3492 (2)0.0396 (6)
O20.45146 (16)0.58892 (18)0.2856 (2)0.0478 (7)
O30.4425 (6)0.7955 (5)0.3087 (10)0.108 (3)0.550 (9)
H3A0.45780.73920.29920.163*0.550 (9)
O3'0.4035 (5)0.7861 (6)0.1968 (10)0.087 (3)0.450 (9)
H3'A0.43510.73920.23880.130*0.450 (9)
N10.40659 (17)0.21783 (19)0.1282 (2)0.0340 (7)
N20.42127 (17)0.3083 (2)0.3190 (2)0.0349 (6)
C10.3964 (2)0.1793 (3)0.0285 (3)0.0434 (9)
H1A0.43660.19690.00820.052*
C20.3278 (3)0.1135 (3)−0.0468 (3)0.0505 (10)
H2A0.32290.0879−0.11560.061*
C30.2678 (2)0.0866 (3)−0.0195 (3)0.0459 (9)
H3B0.22220.0426−0.06910.055*
C40.2756 (2)0.1262 (3)0.0841 (3)0.0377 (8)
C50.2166 (2)0.1035 (3)0.1210 (3)0.0482 (9)
H5A0.17090.05800.07610.058*
C60.2254 (2)0.1464 (3)0.2196 (3)0.0497 (10)
H6A0.18600.12970.24160.060*
C70.2946 (2)0.2173 (3)0.2906 (3)0.0412 (9)
C80.3046 (3)0.2696 (3)0.3896 (3)0.0524 (10)
H8A0.26620.25720.41440.063*
C90.3709 (3)0.3388 (3)0.4497 (3)0.0512 (10)
H9A0.37760.37390.51520.061*
C100.4280 (2)0.3563 (3)0.4125 (3)0.0435 (9)
H10A0.47290.40330.45450.052*
C110.3548 (2)0.2399 (2)0.2583 (3)0.0344 (8)
C120.3464 (2)0.1929 (2)0.1549 (3)0.0321 (7)
C130.4921 (10)0.8683 (7)0.3028 (11)0.093 (4)0.550 (9)
H13A0.54990.86220.37640.112*0.550 (9)
C13'0.4499 (5)0.8753 (8)0.2301 (12)0.077 (4)0.450 (9)
H13C0.41670.93460.18160.092*0.450 (9)
C140.4532 (8)0.9682 (7)0.3136 (10)0.089 (3)0.550 (9)
H14A0.44840.96510.38220.134*0.550 (9)
H14B0.39630.97810.24300.134*0.550 (9)
H14C0.49031.02440.32220.134*0.550 (9)
C14'0.5030 (14)0.8961 (18)0.3636 (13)0.142 (7)0.450 (9)
H14G0.46440.90390.39180.213*0.450 (9)
H14H0.53620.95780.37910.213*0.450 (9)
H14I0.54190.83980.40430.213*0.450 (9)
U11U22U33U12U13U23
Ni10.0246 (3)0.0300 (3)0.0387 (4)0.0000.0139 (3)0.000
S10.0230 (6)0.0294 (6)0.0429 (7)0.0000.0136 (5)0.000
O10.0278 (12)0.0351 (12)0.0397 (13)−0.0009 (10)0.0073 (10)−0.0017 (11)
O20.0398 (14)0.0416 (14)0.0680 (17)0.0050 (11)0.0329 (14)−0.0031 (12)
O30.146 (6)0.052 (4)0.179 (8)−0.003 (4)0.122 (6)−0.001 (4)
O3'0.071 (5)0.068 (5)0.122 (7)0.005 (4)0.052 (5)0.029 (5)
N10.0290 (15)0.0309 (14)0.0401 (16)0.0016 (12)0.0171 (13)−0.0019 (13)
N20.0288 (14)0.0331 (14)0.0382 (15)−0.0034 (12)0.0149 (13)−0.0050 (13)
C10.042 (2)0.044 (2)0.046 (2)−0.0014 (17)0.0244 (18)−0.0082 (18)
C20.046 (2)0.055 (2)0.043 (2)0.0032 (19)0.0181 (18)−0.0138 (19)
C30.0336 (19)0.042 (2)0.047 (2)−0.0028 (16)0.0113 (17)−0.0106 (18)
C40.0285 (17)0.0323 (18)0.0418 (19)−0.0010 (14)0.0119 (15)−0.0012 (16)
C50.0339 (19)0.047 (2)0.050 (2)−0.0108 (17)0.0139 (17)−0.0034 (19)
C60.0329 (19)0.060 (2)0.055 (2)−0.0110 (18)0.0234 (18)0.004 (2)
C70.0314 (19)0.050 (2)0.041 (2)−0.0002 (16)0.0182 (16)0.0049 (17)
C80.046 (2)0.074 (3)0.046 (2)−0.004 (2)0.031 (2)−0.001 (2)
C90.053 (2)0.061 (2)0.042 (2)−0.001 (2)0.0276 (19)−0.0101 (19)
C100.040 (2)0.043 (2)0.042 (2)−0.0033 (17)0.0192 (17)−0.0079 (17)
C110.0274 (17)0.0331 (17)0.0362 (18)0.0022 (14)0.0127 (15)0.0017 (15)
C120.0252 (16)0.0294 (16)0.0351 (18)0.0039 (13)0.0117 (14)0.0041 (14)
C130.118 (8)0.075 (6)0.114 (8)−0.004 (6)0.080 (7)0.011 (6)
C13'0.067 (7)0.069 (7)0.102 (8)0.000 (5)0.051 (6)0.016 (6)
C140.107 (7)0.090 (6)0.110 (7)0.020 (5)0.084 (6)0.018 (5)
C14'0.153 (10)0.180 (11)0.130 (9)−0.013 (8)0.100 (8)0.017 (8)
Ni1—N2i2.075 (3)C4—C51.427 (5)
Ni1—N22.075 (3)C5—C61.350 (5)
Ni1—N12.086 (3)C5—H5A0.9300
Ni1—N1i2.086 (3)C6—C71.433 (5)
Ni1—O12.103 (2)C6—H6A0.9300
Ni1—O1i2.103 (2)C7—C111.402 (5)
Ni1—S12.6714 (14)C7—C81.402 (5)
S1—O2i1.459 (2)C8—C91.368 (5)
S1—O21.459 (2)C8—H8A0.9300
S1—O1i1.499 (2)C9—C101.384 (5)
S1—O11.499 (2)C9—H9A0.9300
O3—C131.340 (9)C10—H10A0.9300
O3—H3A0.8200C11—C121.435 (5)
O3'—C13'1.362 (9)C13—C141.526 (10)
O3'—H3'A0.8200C13—C13i1.572 (14)
N1—C11.332 (4)C13—H13A0.9800
N1—C121.355 (4)C13'—C14'1.519 (11)
N2—C101.335 (4)C13'—C13'i1.600 (14)
N2—C111.363 (4)C13'—H13C0.9800
C1—C21.398 (5)C14—H14A0.9600
C1—H1A0.9300C14—H14B0.9600
C2—C31.365 (5)C14—H14C0.9600
C2—H2A0.9300C14'—H14G0.9600
C3—C41.401 (5)C14'—H14H0.9600
C3—H3B0.9300C14'—H14I0.9600
C4—C121.412 (5)
N2i—Ni1—N2170.97 (15)C3—C4—C5124.0 (3)
N2i—Ni1—N194.23 (11)C12—C4—C5118.8 (3)
N2—Ni1—N179.90 (11)C6—C5—C4121.7 (3)
N2i—Ni1—N1i79.90 (11)C6—C5—H5A119.1
N2—Ni1—N1i94.23 (11)C4—C5—H5A119.1
N1—Ni1—N1i99.75 (15)C5—C6—C7120.7 (3)
N2i—Ni1—O195.18 (10)C5—C6—H6A119.7
N2—Ni1—O192.30 (10)C7—C6—H6A119.7
N1—Ni1—O1162.31 (9)C11—C7—C8116.9 (3)
N1i—Ni1—O196.63 (10)C11—C7—C6119.2 (3)
N2i—Ni1—O1i92.30 (10)C8—C7—C6123.9 (3)
N2—Ni1—O1i95.18 (10)C9—C8—C7119.9 (4)
N1—Ni1—O1i96.63 (10)C9—C8—H8A120.1
N1i—Ni1—O1i162.31 (9)C7—C8—H8A120.1
O1—Ni1—O1i68.06 (12)C8—C9—C10119.6 (4)
N2i—Ni1—S194.52 (7)C8—C9—H9A120.2
N2—Ni1—S194.52 (7)C10—C9—H9A120.2
N1—Ni1—S1130.13 (7)N2—C10—C9122.7 (3)
N1i—Ni1—S1130.13 (7)N2—C10—H10A118.6
O1—Ni1—S134.03 (6)C9—C10—H10A118.6
O1i—Ni1—S134.03 (6)N2—C11—C7123.1 (3)
O2i—S1—O2110.9 (2)N2—C11—C12116.8 (3)
O2i—S1—O1i110.55 (14)C7—C11—C12120.1 (3)
O2—S1—O1i110.56 (14)N1—C12—C4123.2 (3)
O2i—S1—O1110.56 (14)N1—C12—C11117.3 (3)
O2—S1—O1110.55 (14)C4—C12—C11119.4 (3)
O1i—S1—O1103.47 (18)O3—C13—C14103.9 (8)
O2i—S1—Ni1124.53 (11)O3—C13—C13i120.1 (10)
O2—S1—Ni1124.53 (11)C14—C13—C13i113.5 (7)
O1i—S1—Ni151.74 (9)O3—C13—H13A106.1
O1—S1—Ni151.74 (9)C14—C13—H13A106.1
S1—O1—Ni194.23 (11)C13i—C13—H13A106.1
C13—O3—H3A109.5O3'—C13'—C14'115.2 (14)
C13'—O3'—H3'A109.5O3'—C13'—C13'i120.1 (5)
C1—N1—C12117.8 (3)C14'—C13'—C13'i73.6 (11)
C1—N1—Ni1129.3 (2)O3'—C13'—H13C114.0
C12—N1—Ni1112.8 (2)C14'—C13'—H13C114.0
C10—N2—C11117.8 (3)C13'i—C13'—H13C114.0
C10—N2—Ni1129.1 (2)C13—C14—H14A109.5
C11—N2—Ni1113.1 (2)C13—C14—H14B109.5
N1—C1—C2122.4 (4)H14A—C14—H14B109.5
N1—C1—H1A118.8C13—C14—H14C109.5
C2—C1—H1A118.8H14A—C14—H14C109.5
C3—C2—C1120.1 (4)H14B—C14—H14C109.5
C3—C2—H2A120.0C13'—C14'—H14G109.5
C1—C2—H2A120.0C13'—C14'—H14H109.5
C2—C3—C4119.3 (3)H14G—C14'—H14H109.5
C2—C3—H3B120.3C13'—C14'—H14I109.5
C4—C3—H3B120.3H14G—C14'—H14I109.5
C3—C4—C12117.2 (3)H14H—C14'—H14I109.5
N2i—Ni1—S1—O2i−2.57 (14)O1i—Ni1—N2—C10−82.1 (3)
N2—Ni1—S1—O2i177.43 (14)S1—Ni1—N2—C10−47.9 (3)
N1—Ni1—S1—O2i−101.97 (16)N1—Ni1—N2—C112.9 (2)
N1i—Ni1—S1—O2i78.03 (16)N1i—Ni1—N2—C11−96.3 (2)
O1—Ni1—S1—O2i90.01 (17)O1—Ni1—N2—C11166.9 (2)
O1i—Ni1—S1—O2i−89.99 (17)O1i—Ni1—N2—C1198.7 (2)
N2i—Ni1—S1—O2177.43 (14)S1—Ni1—N2—C11132.9 (2)
N2—Ni1—S1—O2−2.57 (14)C12—N1—C1—C2−1.3 (5)
N1—Ni1—S1—O278.03 (16)Ni1—N1—C1—C2−177.4 (3)
N1i—Ni1—S1—O2−101.97 (16)N1—C1—C2—C30.2 (6)
O1—Ni1—S1—O2−89.99 (17)C1—C2—C3—C40.4 (5)
O1i—Ni1—S1—O290.01 (17)C2—C3—C4—C120.2 (5)
N2i—Ni1—S1—O1i87.43 (14)C2—C3—C4—C5179.8 (3)
N2—Ni1—S1—O1i−92.57 (14)C3—C4—C5—C6−177.7 (4)
N1—Ni1—S1—O1i−11.98 (16)C12—C4—C5—C61.9 (5)
N1i—Ni1—S1—O1i168.02 (16)C4—C5—C6—C70.4 (6)
O1—Ni1—S1—O1i180.0C5—C6—C7—C11−1.6 (6)
N2i—Ni1—S1—O1−92.57 (14)C5—C6—C7—C8175.9 (4)
N2—Ni1—S1—O187.43 (14)C11—C7—C8—C9−0.1 (5)
N1—Ni1—S1—O1168.02 (16)C6—C7—C8—C9−177.6 (4)
N1i—Ni1—S1—O1−11.98 (16)C7—C8—C9—C10−0.3 (6)
O1i—Ni1—S1—O1180.0C11—N2—C10—C90.3 (5)
O2i—S1—O1—Ni1−118.38 (13)Ni1—N2—C10—C9−178.9 (3)
O2—S1—O1—Ni1118.39 (13)C8—C9—C10—N20.2 (6)
O1i—S1—O1—Ni10.0C10—N2—C11—C7−0.8 (5)
N2i—Ni1—O1—S190.40 (12)Ni1—N2—C11—C7178.5 (3)
N2—Ni1—O1—S1−94.66 (12)C10—N2—C11—C12177.2 (3)
N1—Ni1—O1—S1−31.5 (4)Ni1—N2—C11—C12−3.5 (3)
N1i—Ni1—O1—S1170.81 (12)C8—C7—C11—N20.7 (5)
O1i—Ni1—O1—S10.0C6—C7—C11—N2178.3 (3)
N2i—Ni1—N1—C1−12.5 (3)C8—C7—C11—C12−177.3 (3)
N2—Ni1—N1—C1174.4 (3)C6—C7—C11—C120.4 (5)
N1i—Ni1—N1—C1−93.0 (3)C1—N1—C12—C41.9 (4)
O1—Ni1—N1—C1109.5 (4)Ni1—N1—C12—C4178.6 (2)
O1i—Ni1—N1—C180.3 (3)C1—N1—C12—C11−176.1 (3)
S1—Ni1—N1—C187.0 (3)Ni1—N1—C12—C110.6 (3)
N2i—Ni1—N1—C12171.2 (2)C3—C4—C12—N1−1.3 (5)
N2—Ni1—N1—C12−1.9 (2)C5—C4—C12—N1179.0 (3)
N1i—Ni1—N1—C1290.7 (2)C3—C4—C12—C11176.6 (3)
O1—Ni1—N1—C12−66.8 (4)C5—C4—C12—C11−3.1 (5)
O1i—Ni1—N1—C12−96.0 (2)N2—C11—C12—N11.9 (4)
S1—Ni1—N1—C12−89.3 (2)C7—C11—C12—N1180.0 (3)
N1—Ni1—N2—C10−177.9 (3)N2—C11—C12—C4−176.1 (3)
N1i—Ni1—N2—C1082.9 (3)C7—C11—C12—C41.9 (5)
O1—Ni1—N2—C10−13.9 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O20.821.972.729 (7)154
O3′—H3′A···O20.822.032.769 (8)150
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3A⋯O20.821.972.729 (7)154
O3′—H3′A⋯O20.822.032.769 (8)150
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')nickel(II) ethane-1,2-diol solvate.

Authors:  Kai-Long Zhong; Chao Ni; Jian-Mei Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-11

3.  Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')nickel(II) propane-1,3-diol solvate.

Authors:  Chao Ni; Kai-Long Zhong; Jiang-Dong Cui
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-05

4.  Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')cobalt(II) butane-2,3-diol monosolvate.

Authors:  Shi-Juan Wang; Kai-Long Zhong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-15
  4 in total
  2 in total

1.  Bis(1,10-phenanthroline-κ(2) N,N')(sulfato-O)copper(II) butane-2,3-diol monosolvate.

Authors:  Kai-Long Zhong; Guo-Qing Cao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-12

2.  Bis(1,10-phenanthroline-κ(2) N,N')(sulfato-κ(2) O,O')nickel(II) propane-1,2-diol monosolvate.

Authors:  Kai-Long Zhong; Cheng-Xian Duan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-21
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.