Literature DB >> 21583369

Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')nickel(II) ethane-1,2-diol solvate.

Kai-Long Zhong1, Chao Ni, Jian-Mei Wang.   

Abstract

In the title compound, [Ni(SO(4))(C(12)H(8)N(2))(2)]·C(2)H(6)O(2), the coordination polyhedron around the Ni(2+) ion is a distorted octahedron, with four N atoms from two phenanthroline groups and two O atoms from a bidentate sulfate ligand. The Ni(2+) ion lies on a special position of site symmetry 2. Inter-molecular O-H⋯O hydrogen bonds help to stabilize the structure. The OH group of the ethane-1,2-diol solvent is disordered over two positions with equal occupancy.

Entities:  

Year:  2009        PMID: 21583369      PMCID: PMC2977342          DOI: 10.1107/S1600536809026269

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For Ni–phen complexes with chloride anions and water mol­ecules as a second ligand, see: Chen et al. (2005 ▶); Su & Xu (2005 ▶); Tang et al. (2007 ▶). For isostructural compounds, see: Zhong et al. (2006 ▶); Lu et al. (2006 ▶); Zhu et al. (2006a ▶,b ▶).

Experimental

Crystal data

[Ni(SO4)(C12H8N2)2]·C2H6O2 M = 577.25 Monoclinic, a = 18.4551 (9) Å b = 11.8839 (5) Å c = 12.7526 (6) Å β = 118.991 (6)° V = 2446.4 (2) Å3 Z = 4 Mo Kα radiation μ = 0.93 mm−1 T = 295 K 0.36 × 0.33 × 0.28 mm

Data collection

Oxford Diffraction Gemini S Ultra diffractometer Absorption correction: multi-scan (ABSPACK; Oxford Diffraction, 2009 ▶) T min = 0.731, T max = 0.781 11586 measured reflections 3010 independent reflections 2467 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.106 S = 1.08 3010 reflections 183 parameters 17 restraints H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.52 e Å−3 Data collection: CrysAlisPro (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlisPro; data reduction: CrysAlisPro; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809026269/pk2166sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809026269/pk2166Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(SO4)(C12H8N2)2]·C2H6O2F(000) = 1192
Mr = 577.25Dx = 1.567 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 6902 reflections
a = 18.4551 (9) Åθ = 3.2–30.6°
b = 11.8839 (5) ŵ = 0.93 mm1
c = 12.7526 (6) ÅT = 295 K
β = 118.991 (6)°Block, green
V = 2446.4 (2) Å30.36 × 0.33 × 0.28 mm
Z = 4
Oxford Diffraction Gemini S Ultra diffractometer3010 independent reflections
Radiation source: fine-focus sealed tube2467 reflections with I > 2σ(I)
graphiteRint = 0.029
Detector resolution: 8.1241 pixels mm-1θmax = 28.3°, θmin = 3.2°
φ and ω scansh = −24→24
Absorption correction: multi-scan (ABSPACK; Oxford Diffraction, 2009)k = −15→15
Tmin = 0.731, Tmax = 0.781l = −17→16
11586 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.106w = 1/[σ2(Fo2) + (0.0643P)2 + 0.296P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max < 0.001
3010 reflectionsΔρmax = 0.35 e Å3
183 parametersΔρmin = −0.52 e Å3
17 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0055 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Ni10.00000.19859 (3)0.75000.02868 (15)
S10.0000−0.02657 (6)0.75000.02857 (19)
O2−0.05633 (9)0.05119 (13)0.65249 (13)0.0379 (4)
O10.04687 (11)−0.09628 (15)0.71006 (17)0.0479 (5)
N10.07956 (11)0.21105 (15)0.67829 (16)0.0314 (4)
N20.08892 (12)0.30656 (14)0.87419 (16)0.0331 (4)
C50.14702 (13)0.27545 (18)0.74544 (17)0.0291 (4)
C70.28779 (15)0.4016 (2)0.8974 (2)0.0438 (6)
H70.33470.44280.94810.053*
C90.22836 (17)0.4292 (2)1.0353 (2)0.0458 (6)
H90.27430.47021.08930.055*
C40.21016 (14)0.2934 (2)0.7163 (2)0.0368 (5)
C80.22400 (15)0.38596 (19)0.92872 (19)0.0368 (5)
C120.15344 (13)0.32477 (17)0.85260 (18)0.0303 (5)
C60.28132 (15)0.3577 (2)0.7956 (2)0.0454 (6)
H60.32360.36940.77690.055*
C10.07228 (15)0.1648 (2)0.5783 (2)0.0391 (5)
H10.02600.12090.53100.047*
C20.13218 (17)0.1802 (2)0.5424 (2)0.0474 (6)
H20.12500.14810.47150.057*
C30.20060 (16)0.2421 (2)0.6110 (2)0.0475 (6)
H30.24130.25060.58850.057*
C100.16452 (19)0.4099 (2)1.0571 (2)0.0507 (7)
H100.16670.43751.12680.061*
C110.09572 (16)0.3488 (2)0.9757 (2)0.0428 (6)
H110.05270.33690.99270.051*
C130.0291 (3)−0.4047 (3)0.7245 (4)0.0978 (14)
H13A0.0809−0.43510.78690.117*
H13B0.0073−0.46000.66060.117*
O30.0492 (5)−0.3177 (5)0.6817 (6)0.098 (2)0.50
H3A0.0752−0.27270.73590.147*0.50
O3'0.0850 (3)−0.3224 (4)0.7512 (6)0.0726 (17)0.50
H3'0.0792−0.29390.68910.109*0.50
U11U22U33U12U13U23
Ni10.0250 (2)0.0289 (2)0.0293 (2)0.0000.01088 (16)0.000
S10.0222 (3)0.0282 (4)0.0318 (4)0.0000.0103 (3)0.000
O20.0302 (8)0.0346 (9)0.0318 (8)−0.0013 (7)0.0014 (6)−0.0005 (6)
O10.0430 (10)0.0455 (11)0.0622 (11)0.0066 (8)0.0310 (9)−0.0055 (8)
N10.0282 (9)0.0318 (10)0.0304 (9)−0.0019 (8)0.0111 (7)−0.0032 (7)
N20.0377 (10)0.0293 (10)0.0325 (9)−0.0029 (8)0.0172 (8)−0.0026 (7)
C50.0266 (10)0.0280 (11)0.0282 (9)0.0013 (8)0.0097 (8)0.0015 (8)
C70.0300 (12)0.0428 (15)0.0448 (13)−0.0097 (10)0.0072 (10)−0.0017 (10)
C90.0495 (15)0.0406 (14)0.0351 (12)−0.0087 (12)0.0109 (11)−0.0088 (10)
C40.0307 (11)0.0397 (13)0.0387 (12)−0.0003 (10)0.0157 (9)0.0034 (9)
C80.0375 (12)0.0297 (12)0.0326 (11)−0.0042 (10)0.0088 (9)−0.0003 (9)
C120.0300 (11)0.0267 (11)0.0278 (10)−0.0001 (8)0.0091 (8)0.0013 (8)
C60.0295 (11)0.0544 (17)0.0491 (14)−0.0070 (12)0.0164 (10)0.0007 (12)
C10.0381 (12)0.0429 (13)0.0336 (11)−0.0037 (11)0.0154 (10)−0.0085 (9)
C20.0504 (15)0.0572 (17)0.0388 (13)−0.0021 (13)0.0248 (12)−0.0087 (11)
C30.0428 (14)0.0621 (18)0.0453 (13)−0.0046 (13)0.0275 (12)−0.0026 (12)
C100.0664 (18)0.0476 (16)0.0360 (12)−0.0080 (13)0.0231 (12)−0.0121 (11)
C110.0522 (15)0.0417 (14)0.0386 (12)−0.0074 (12)0.0252 (11)−0.0086 (10)
C130.111 (3)0.066 (2)0.141 (3)0.002 (2)0.081 (3)−0.002 (2)
O30.130 (5)0.087 (4)0.115 (4)0.009 (3)0.090 (4)0.017 (3)
O3'0.061 (3)0.042 (3)0.129 (5)0.017 (2)0.056 (3)0.028 (3)
Ni1—N1i2.0774 (18)C9—C81.418 (3)
Ni1—N12.0774 (18)C9—H90.9300
Ni1—N22.0805 (19)C4—C31.406 (3)
Ni1—N2i2.0805 (18)C4—C61.430 (3)
Ni1—O22.1077 (16)C8—C121.393 (3)
Ni1—O2i2.1077 (16)C6—H60.9300
Ni1—S12.6757 (8)C1—C21.398 (3)
S1—O1i1.4563 (17)C1—H10.9300
S1—O11.4563 (17)C2—C31.352 (4)
S1—O2i1.4926 (16)C2—H20.9300
S1—O21.4926 (16)C3—H30.9300
N1—C11.334 (3)C10—C111.392 (4)
N1—C51.355 (3)C10—H100.9300
N2—C111.337 (3)C11—H110.9300
N2—C121.363 (3)C13—O31.304 (5)
C5—C41.401 (3)C13—O3'1.339 (5)
C5—C121.438 (3)C13—C13i1.501 (4)
C7—C61.349 (4)C13—H13A0.9700
C7—C81.427 (4)C13—H13B0.9700
C7—H70.9300O3—H3A0.8200
C9—C101.355 (4)O3'—H3'0.8200
N1i—Ni1—N1171.82 (10)C8—C7—H7119.4
N1i—Ni1—N294.93 (7)C10—C9—C8119.0 (2)
N1—Ni1—N279.99 (7)C10—C9—H9120.5
N1i—Ni1—N2i79.99 (7)C8—C9—H9120.5
N1—Ni1—N2i94.93 (7)C5—C4—C3116.9 (2)
N2—Ni1—N2i103.84 (10)C5—C4—C6119.4 (2)
N1i—Ni1—O293.85 (7)C3—C4—C6123.7 (2)
N1—Ni1—O292.94 (7)C12—C8—C9117.2 (2)
N2—Ni1—O2160.60 (7)C12—C8—C7119.5 (2)
N2i—Ni1—O294.70 (6)C9—C8—C7123.3 (2)
N1i—Ni1—O2i92.94 (7)N2—C12—C8123.7 (2)
N1—Ni1—O2i93.85 (7)N2—C12—C5116.71 (19)
N2—Ni1—O2i94.70 (6)C8—C12—C5119.6 (2)
N2i—Ni1—O2i160.60 (7)C7—C6—C4120.7 (2)
O2—Ni1—O2i67.58 (8)C7—C6—H6119.7
N1i—Ni1—S194.09 (5)C4—C6—H6119.7
N1—Ni1—S194.09 (5)N1—C1—C2122.0 (2)
N2—Ni1—S1128.08 (5)N1—C1—H1119.0
N2i—Ni1—S1128.08 (5)C2—C1—H1119.0
O2—Ni1—S133.79 (4)C3—C2—C1119.9 (2)
O2i—Ni1—S133.79 (4)C3—C2—H2120.1
O1i—S1—O1110.66 (15)C1—C2—H2120.1
O1i—S1—O2i110.65 (10)C2—C3—C4119.9 (2)
O1—S1—O2i110.59 (10)C2—C3—H3120.0
O1i—S1—O2110.59 (10)C4—C3—H3120.0
O1—S1—O2110.65 (10)C9—C10—C11120.3 (2)
O2i—S1—O2103.50 (13)C9—C10—H10119.9
O1i—S1—Ni1124.67 (8)C11—C10—H10119.9
O1—S1—Ni1124.67 (8)N2—C11—C10122.8 (2)
O2i—S1—Ni151.75 (6)N2—C11—H11118.6
O2—S1—Ni151.75 (6)C10—C11—H11118.6
S1—O2—Ni194.46 (7)O3—C13—O3'35.7 (4)
C1—N1—C5118.22 (19)O3—C13—C13i126.2 (4)
C1—N1—Ni1128.76 (16)O3'—C13—C13i121.0 (4)
C5—N1—Ni1113.02 (13)O3—C13—H13A105.8
C11—N2—C12117.1 (2)O3'—C13—H13A74.5
C11—N2—Ni1129.66 (16)C13i—C13—H13A105.8
C12—N2—Ni1112.83 (14)O3—C13—H13B105.8
N1—C5—C4123.10 (19)O3'—C13—H13B131.5
N1—C5—C12117.27 (18)C13i—C13—H13B105.8
C4—C5—C12119.6 (2)H13A—C13—H13B106.2
C6—C7—C8121.2 (2)C13—O3—H3A109.5
C6—C7—H7119.4C13—O3'—H3'109.5
N1i—Ni1—S1—O1i0.87 (10)O2i—Ni1—N2—C11−82.5 (2)
N1—Ni1—S1—O1i−179.13 (10)S1—Ni1—N2—C11−88.3 (2)
N2—Ni1—S1—O1i100.39 (11)N1i—Ni1—N2—C12−177.26 (15)
N2i—Ni1—S1—O1i−79.61 (11)N1—Ni1—N2—C12−3.72 (14)
O2—Ni1—S1—O1i−89.95 (12)N2i—Ni1—N2—C12−96.38 (15)
O2i—Ni1—S1—O1i90.05 (12)O2—Ni1—N2—C1266.1 (3)
N1i—Ni1—S1—O1−179.13 (10)O2i—Ni1—N2—C1289.37 (15)
N1—Ni1—S1—O10.87 (10)S1—Ni1—N2—C1283.62 (15)
N2—Ni1—S1—O1−79.61 (11)C1—N1—C5—C4−1.6 (3)
N2i—Ni1—S1—O1100.39 (11)Ni1—N1—C5—C4178.30 (17)
O2—Ni1—S1—O190.05 (12)C1—N1—C5—C12179.8 (2)
O2i—Ni1—S1—O1−89.95 (12)Ni1—N1—C5—C12−0.3 (2)
N1i—Ni1—S1—O2i−89.18 (9)N1—C5—C4—C30.8 (3)
N1—Ni1—S1—O2i90.82 (9)C12—C5—C4—C3179.4 (2)
N2—Ni1—S1—O2i10.34 (10)N1—C5—C4—C6−176.7 (2)
N2i—Ni1—S1—O2i−169.66 (10)C12—C5—C4—C61.9 (3)
O2—Ni1—S1—O2i180.0C10—C9—C8—C12−0.4 (4)
N1i—Ni1—S1—O290.82 (9)C10—C9—C8—C7−180.0 (2)
N1—Ni1—S1—O2−89.18 (9)C6—C7—C8—C12−0.3 (4)
N2—Ni1—S1—O2−169.66 (10)C6—C7—C8—C9179.2 (3)
N2i—Ni1—S1—O210.34 (10)C11—N2—C12—C8−1.3 (3)
O2i—Ni1—S1—O2180.0Ni1—N2—C12—C8−174.28 (17)
O1i—S1—O2—Ni1118.53 (10)C11—N2—C12—C5177.7 (2)
O1—S1—O2—Ni1−118.49 (9)Ni1—N2—C12—C54.7 (2)
O2i—S1—O2—Ni10.0C9—C8—C12—N21.2 (3)
N1i—Ni1—O2—S1−91.59 (8)C7—C8—C12—N2−179.2 (2)
N1—Ni1—O2—S192.96 (8)C9—C8—C12—C5−177.8 (2)
N2—Ni1—O2—S125.2 (2)C7—C8—C12—C51.8 (3)
N2i—Ni1—O2—S1−171.85 (8)N1—C5—C12—N2−3.0 (3)
O2i—Ni1—O2—S10.0C4—C5—C12—N2178.32 (19)
N1i—Ni1—N1—C1−126.0 (2)N1—C5—C12—C8176.05 (19)
N2—Ni1—N1—C1−178.0 (2)C4—C5—C12—C8−2.6 (3)
N2i—Ni1—N1—C1−74.8 (2)C8—C7—C6—C4−0.4 (4)
O2—Ni1—N1—C120.2 (2)C5—C4—C6—C7−0.4 (4)
O2i—Ni1—N1—C187.9 (2)C3—C4—C6—C7−177.7 (3)
S1—Ni1—N1—C154.0 (2)C5—N1—C1—C20.6 (4)
N1i—Ni1—N1—C554.20 (14)Ni1—N1—C1—C2−179.27 (19)
N2—Ni1—N1—C52.17 (14)N1—C1—C2—C31.2 (4)
N2i—Ni1—N1—C5105.39 (15)C1—C2—C3—C4−1.9 (4)
O2—Ni1—N1—C5−159.64 (15)C5—C4—C3—C21.0 (4)
O2i—Ni1—N1—C5−91.93 (15)C6—C4—C3—C2178.3 (3)
S1—Ni1—N1—C5−125.80 (14)C8—C9—C10—C11−0.3 (4)
N1i—Ni1—N2—C1110.8 (2)C12—N2—C11—C100.5 (4)
N1—Ni1—N2—C11−175.6 (2)Ni1—N2—C11—C10172.17 (19)
N2i—Ni1—N2—C1191.7 (2)C9—C10—C11—N20.2 (4)
O2—Ni1—N2—C11−105.8 (3)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O10.822.152.659 (7)121
O3'—H3'···O10.822.472.763 (5)102
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O10.822.152.659 (7)121
O3′—H3′⋯O10.822.472.763 (5)102
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  8 in total

1.  Bis(1,10-phenanthroline-κN,N')(sulfato-κO,O')nickel(II) propane-1,3-diol solvate.

Authors:  Chao Ni; Kai-Long Zhong; Jiang-Dong Cui
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-05

2.  Diaqua-bis-(1,10-phenanthroline-κN,N')cadmium sulfate hexa-hydrate.

Authors:  Kai-Long Zhong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-29

3.  Tris(1,10-phenanthroline-κN,N')nickel(II) bis-(2,4,5-tricarb-oxy-benzo-ate) monohydrate.

Authors:  Kai-Long Zhong; Chao Ni; Ming-Yi Qian
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-23

4.  Bis(1,10-phenanthroline-κN,N')(sulfato-O)copper(II) ethane-1,2-diol monosolvate.

Authors:  Kai-Long Zhong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-11

5.  Poly[diaqua-(μ(4)-2,5-dicarb-oxy-benzene-1,4-dicarboxyl-ato-κ(4)O(1):O(2):O(4):O(5))(μ(2)-2,5-dicarb-oxy-benzene-1,4-dicarboxyl-ato-κ(2)O(1):O(4))bis-(1,10-phenanthroline-κ(2)N,N')dimanganese(II)].

Authors:  Kai-Long Zhong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-23

6.  Bis(1,10-phenanthroline-κ(2) N,N')(sulfato-κ(2) O,O')nickel(II) butane-2,3-diol monosolvate.

Authors:  Kai-Long Zhong; Chao Ni
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-24

7.  Bis(1,10-phenanthroline-κ(2) N,N')(sulfato-κO)copper(II) ethanol monosolvate.

Authors:  Natthaya Meundaeng; Timothy J Prior; Apinpus Rujiwatra
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-28

8.  Bis(1,10-phenanthroline-κ(2) N,N')(sulfato-κ(2) O,O')nickel(II) propane-1,2-diol monosolvate.

Authors:  Kai-Long Zhong; Cheng-Xian Duan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-21
  8 in total

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