Literature DB >> 21587494

(E)-Ethyl 2-cyano-3-[5-nitro-2-(pyrrolidin-1-yl)phen-yl]acrylate.

Yapi Marcellin Yapo, Bakary Coulibaly Abou, Ané Adjou, Rita Kakou-Yao, Jules A Tenon.   

Abstract

The title compound, C(16)H(17)N(3)O(4), was prepared by the reaction of 5-nitro-2-(pyrrolidin-1-yl)benzaldehyde and ethyl cyano-acetate. The mol-ecular structure adopts an E conformation with respect to the C=C double bond. The five-membered ring has a half-chair conformation, with puckering parameters Q(2)= 0.399 (2) Å and ϕ = 93.1 (3)°. In the crystal, inversion dimers , linked by pairs of C-H⋯O inter-actions, are further connected through C-H⋯N hydrogen bonds. Weak slipped π-π inter-actions occur between symmetry-related benzene rings [centroid-centroid distance = 3.785 (1)Å].

Entities:  

Year:  2010        PMID: 21587494      PMCID: PMC2983149          DOI: 10.1107/S1600536810033374

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Yapo et al. (2010 ▶); Zhang et al. (2009a ▶,b ▶). For reference bond lengths, see: Allen (2002 ▶). For ring conformation analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C16H17N3O4 M = 315.33 Triclinic, a = 8.4137 (3) Å b = 9.9517 (4) Å c = 10.3731 (5) Å α = 73.065 (1)° β = 71.388 (2)° γ = 72.523 (4)° V = 766.56 (6) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 223 K 0.15 × 0.05 × 0.05 mm

Data collection

Nonius KappaCCD diffractometer 12261 measured reflections 3925 independent reflections 2436 reflections with I > 3σ(I) R int = 0.04

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.098 S = 1.01 2436 reflections 208 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.19 e Å−3 Data collection: COLLECT (Nonius, 2001 ▶); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR2004 (Burla et al., 2005 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: CRYSTALS. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810033374/dn2594sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810033374/dn2594Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H17N3O4Z = 2
Mr = 315.33F(000) = 332
Triclinic, P1Dx = 1.366 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.4137 (3) ÅCell parameters from 12261 reflections
b = 9.9517 (4) Åθ = 4–29°
c = 10.3731 (5) ŵ = 0.10 mm1
α = 73.065 (1)°T = 223 K
β = 71.388 (2)°Prism, yellow
γ = 72.523 (4)°0.15 × 0.05 × 0.05 mm
V = 766.56 (6) Å3
Nonius KappaCCD diffractometerRint = 0.04
graphiteθmax = 29.1°, θmin = 2.1°
φ & ω scansh = 0→11
12261 measured reflectionsk = −12→13
3925 independent reflectionsl = −12→14
2436 reflections with I > 3σ(I)
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.045H-atom parameters constrained
wR(F2) = 0.098w = 1/[σ2(F2) + (0.04P)2 + 0.41P] where P = [max(Fo2,0) + 2Fc2]/3
S = 1.00(Δ/σ)max = 0.0002
2436 reflectionsΔρmax = 0.29 e Å3
208 parametersΔρmin = −0.19 e Å3
0 restraints
xyzUiso*/Ueq
O40.24506 (16)0.75552 (14)0.34637 (12)0.0392
C60.6744 (2)0.54044 (17)0.08814 (16)0.0272
O30.38346 (18)0.74040 (16)0.50501 (13)0.0501
N10.58761 (18)0.70320 (15)−0.12042 (14)0.0318
C110.5357 (2)0.61576 (17)0.18686 (16)0.0288
C100.8072 (2)0.48737 (19)−0.14342 (18)0.0349
O21.03617 (19)0.19215 (16)0.22812 (15)0.0536
C140.3815 (2)0.71447 (18)0.39891 (17)0.0335
C50.6844 (2)0.58161 (18)−0.05898 (16)0.0281
C70.7910 (2)0.41913 (18)0.13881 (17)0.0302
C80.9117 (2)0.33592 (18)0.05070 (18)0.0323
N21.0334 (2)0.21267 (17)0.10625 (17)0.0405
C120.5355 (2)0.63394 (17)0.31088 (16)0.0295
O11.1330 (2)0.13387 (17)0.02781 (17)0.0640
C130.6834 (2)0.5867 (2)0.36710 (18)0.0355
N30.7983 (2)0.5498 (2)0.41549 (19)0.0528
C90.9177 (2)0.3684 (2)−0.09019 (18)0.0361
C10.6073 (3)0.7384 (2)−0.27297 (18)0.0420
C40.4900 (2)0.83167 (19)−0.06191 (18)0.0374
C16−0.0507 (3)0.8668 (2)0.3594 (2)0.0538
C150.0917 (3)0.8417 (3)0.4249 (2)0.0524
C20.4880 (3)0.8854 (2)−0.2995 (2)0.0520
C30.4940 (3)0.9553 (2)−0.18931 (19)0.0458
H1110.42990.65790.16010.0408*
H1010.81120.5097−0.24020.0501*
H710.78500.39220.23550.0416*
H911.00050.3059−0.14850.0499*
H110.72910.7413−0.32210.0611*
H120.57710.6646−0.30010.0612*
H410.54540.84310.00250.0516*
H420.36870.8243−0.01260.0529*
H161−0.15160.93100.40460.0975*
H162−0.01690.90980.25940.0977*
H163−0.07940.77440.37420.0981*
H1510.11900.93660.42020.0740*
H1520.06630.78750.52210.0730*
H210.52890.9403−0.39270.0751*
H220.36980.8790−0.28550.0754*
H310.60320.9898−0.21800.0663*
H320.39391.0346−0.17430.0659*
U11U22U33U12U13U23
O40.0392 (7)0.0457 (8)0.0277 (6)0.0026 (6)−0.0057 (5)−0.0162 (5)
C60.0280 (8)0.0315 (9)0.0230 (8)−0.0089 (7)−0.0040 (6)−0.0078 (6)
O30.0563 (9)0.0652 (10)0.0332 (7)−0.0074 (7)−0.0099 (6)−0.0257 (7)
N10.0394 (8)0.0349 (8)0.0223 (7)−0.0071 (6)−0.0101 (6)−0.0070 (6)
C110.0311 (8)0.0297 (9)0.0234 (8)−0.0071 (7)−0.0044 (6)−0.0054 (6)
C100.0393 (10)0.0416 (10)0.0250 (8)−0.0098 (8)−0.0041 (7)−0.0132 (7)
O20.0579 (9)0.0499 (9)0.0435 (8)0.0042 (7)−0.0192 (7)−0.0063 (6)
C140.0419 (10)0.0331 (9)0.0239 (8)−0.0076 (7)−0.0058 (7)−0.0076 (7)
C50.0286 (8)0.0332 (9)0.0254 (8)−0.0107 (7)−0.0053 (6)−0.0085 (7)
C70.0320 (9)0.0330 (9)0.0259 (8)−0.0091 (7)−0.0056 (7)−0.0073 (7)
C80.0298 (9)0.0312 (9)0.0349 (9)−0.0063 (7)−0.0060 (7)−0.0091 (7)
N20.0365 (9)0.0372 (9)0.0431 (9)−0.0042 (7)−0.0065 (7)−0.0099 (7)
C120.0349 (9)0.0290 (8)0.0238 (8)−0.0086 (7)−0.0063 (7)−0.0045 (6)
O10.0590 (9)0.0562 (10)0.0616 (10)0.0174 (8)−0.0105 (8)−0.0274 (8)
C130.0427 (10)0.0390 (10)0.0266 (9)−0.0133 (8)−0.0060 (8)−0.0086 (7)
N30.0521 (11)0.0654 (12)0.0484 (10)−0.0155 (9)−0.0213 (9)−0.0120 (9)
C90.0359 (10)0.0375 (10)0.0345 (9)−0.0089 (8)−0.0015 (7)−0.0149 (8)
C10.0566 (12)0.0467 (11)0.0233 (9)−0.0082 (9)−0.0149 (8)−0.0069 (8)
C40.0435 (10)0.0360 (10)0.0300 (9)−0.0026 (8)−0.0103 (8)−0.0090 (7)
C160.0431 (11)0.0587 (14)0.0599 (14)−0.0028 (10)−0.0097 (10)−0.0260 (11)
C150.0436 (12)0.0621 (14)0.0447 (12)0.0086 (10)−0.0054 (9)−0.0295 (10)
C20.0677 (14)0.0514 (12)0.0346 (10)−0.0045 (10)−0.0237 (10)−0.0036 (9)
C30.0582 (13)0.0381 (11)0.0362 (10)−0.0049 (9)−0.0159 (9)−0.0027 (8)
O4—C141.330 (2)C12—C131.436 (2)
O4—C151.462 (2)C13—N31.145 (2)
C6—C111.460 (2)C9—H910.963
C6—C51.442 (2)C1—C21.511 (3)
C6—C71.394 (2)C1—H110.993
O3—C141.207 (2)C1—H120.982
N1—C51.350 (2)C4—C31.520 (3)
N1—C11.483 (2)C4—H410.976
N1—C41.477 (2)C4—H420.999
C11—C121.350 (2)C16—C151.483 (3)
C11—H1110.955C16—H1610.971
C10—C51.426 (2)C16—H1620.983
C10—C91.363 (2)C16—H1630.977
C10—H1010.955C15—H1511.021
O2—N21.227 (2)C15—H1520.984
C14—C121.484 (2)C2—C31.521 (3)
C7—C81.377 (2)C2—H210.972
C7—H710.948C2—H220.977
C8—N21.448 (2)C3—H311.003
C8—C91.389 (2)C3—H320.972
N2—O11.233 (2)
C14—O4—C15114.97 (14)N1—C1—H11109.3
C11—C6—C5121.29 (14)C2—C1—H11111.6
C11—C6—C7119.04 (14)N1—C1—H12110.4
C5—C6—C7119.46 (14)C2—C1—H12113.0
C5—N1—C1120.85 (14)H11—C1—H12108.5
C5—N1—C4127.13 (13)N1—C4—C3103.67 (14)
C1—N1—C4110.08 (13)N1—C4—H41110.4
C6—C11—C12129.25 (16)C3—C4—H41111.7
C6—C11—H111115.4N1—C4—H42110.9
C12—C11—H111115.3C3—C4—H42110.4
C5—C10—C9122.08 (16)H41—C4—H42109.6
C5—C10—H101118.2C15—C16—H161109.4
C9—C10—H101119.7C15—C16—H162110.6
O4—C14—O3124.77 (16)H161—C16—H162109.5
O4—C14—C12112.45 (14)C15—C16—H163108.3
O3—C14—C12122.77 (16)H161—C16—H163108.3
C6—C5—C10116.84 (15)H162—C16—H163110.7
C6—C5—N1124.27 (15)C16—C15—O4107.71 (16)
C10—C5—N1118.89 (15)C16—C15—H151111.3
C6—C7—C8120.77 (15)O4—C15—H151107.9
C6—C7—H71119.6C16—C15—H152111.9
C8—C7—H71119.6O4—C15—H152107.8
C7—C8—N2119.31 (15)H151—C15—H152110.0
C7—C8—C9120.95 (16)C1—C2—C3103.20 (15)
N2—C8—C9119.74 (15)C1—C2—H21111.2
C8—N2—O2119.06 (15)C3—C2—H21111.1
C8—N2—O1118.37 (16)C1—C2—H22112.1
O2—N2—O1122.55 (16)C3—C2—H22109.2
C14—C12—C11122.22 (15)H21—C2—H22109.9
C14—C12—C13113.25 (14)C2—C3—C4102.37 (16)
C11—C12—C13124.43 (16)C2—C3—H31110.2
C12—C13—N3178.06 (19)C4—C3—H31111.5
C8—C9—C10119.72 (16)C2—C3—H32110.2
C8—C9—H91119.1C4—C3—H32111.6
C10—C9—H91121.2H31—C3—H32110.7
N1—C1—C2103.93 (15)
D—H···AD—HH···AD···AD—H···A
C15—H152···O2i0.982.503.356 (2)145
C16—H163···N3ii0.982.603.574 (3)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H152⋯O2i0.982.503.356 (2)145
C16—H163⋯N3ii0.982.603.574 (3)172

Symmetry codes: (i) ; (ii) .

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