Literature DB >> 21587952

Ethyl 5-cyano-8-nitro-2,3,4,4a,5,6-hexahydro-1H-pyrido[1,2-a]quinoline-5-carboxylate.

Yapi Marcellin Yapo, Kouakou Michel Konan, Ané Adjou, Adéyolé Timotou, Jules A Tenon.   

Abstract

In the title compound, C(17)H(19)N(3)O(4), the piperidine ring adopts a chair conformation. The crystal structure features inversion dimers linked by pairs of weak C-H⋯N hydrogen bonds.

Entities:  

Year:  2010        PMID: 21587952      PMCID: PMC3006821          DOI: 10.1107/S160053681002283X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the therapeutic properties of quinoline derivatives, see: Dalla Via et al. (2008 ▶); Gasparotto et al. (2006 ▶); Ferlin et al. (2000 ▶). A similar heterocyclic structure, Mitomycin C, is used in cancer therapy, see: Crooke & Bradner (1976 ▶); Danishefsky & Ciufolini (1984 ▶); Remers (1980 ▶). For related structures, see: Zhuravleva et al. (2009 ▶); Oliveira et al. (2006 ▶). For ring conformation analysis, see: Cremer & Pople (1975 ▶). For reference bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C17H19N3O4 M = 329.36 Triclinic, a = 8.8257 (4) Å b = 9.2256 (5) Å c = 10.5011 (6) Å α = 88.246 (4)° β = 75.089 (2)° γ = 83.289 (3)° V = 820.57 (8) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 223 K 0.20 × 0.20 × 0.20 mm

Data collection

Nonius KappaCCD diffractometer 10064 measured reflections 4189 independent reflections 2794 reflections with I > 2σ(I) R int = 0.04

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.096 S = 1.04 2503 reflections 217 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.26 e Å−3 Data collection: COLLECT (Nonius, 2001 ▶); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR2004 (Burla et al., 2005 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: CRYSTALS. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681002283X/bq2218sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681002283X/bq2218Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H19N3O4Z = 2
Mr = 329.36F(000) = 348
Triclinic, P1Dx = 1.333 Mg m3
Hall symbol: -P 1Melting point: 424 K
a = 8.8257 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.2256 (5) ÅCell parameters from 10064 reflections
c = 10.5011 (6) Åθ = 2–29°
α = 88.246 (4)°µ = 0.10 mm1
β = 75.089 (2)°T = 223 K
γ = 83.289 (3)°Prism, yellow
V = 820.57 (8) Å30.20 × 0.20 × 0.20 mm
Nonius KappaCCD diffractometerRint = 0.04
graphiteθmax = 29.1°, θmin = 2.0°
φ and ω scansh = 0→12
10064 measured reflectionsk = −11→12
4189 independent reflectionsl = −13→14
2794 reflections with I > 2σ(I)
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.055H-atom parameters constrained
wR(F2) = 0.096w = 1/[σ2(F2) + (0.02P)2 + 0.5P], where P = (max(Fo2,0) + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.0002
2503 reflectionsΔρmax = 0.21 e Å3
217 parametersΔρmin = −0.26 e Å3
0 restraints
xyzUiso*/Ueq
C10.70920 (19)0.86006 (18)0.50748 (17)0.0241
N10.70324 (17)0.85963 (14)0.63954 (14)0.0268
O30.66155 (17)0.46173 (14)0.84947 (13)0.0393
C90.7451 (2)0.72488 (18)0.70764 (17)0.0256
C20.6873 (2)0.99129 (19)0.43830 (18)0.0287
C60.7271 (2)0.72669 (18)0.43802 (17)0.0269
C50.7160 (2)0.72795 (19)0.30929 (18)0.0308
C40.6920 (2)0.8595 (2)0.24574 (17)0.0311
O40.8187 (2)0.35165 (15)0.66714 (15)0.0548
O20.6821 (2)0.74186 (19)0.05771 (16)0.0639
C30.6790 (2)0.99068 (19)0.30939 (18)0.0308
C70.7604 (2)0.58338 (19)0.50323 (18)0.0325
C80.6879 (2)0.59435 (18)0.65159 (17)0.0278
C100.9210 (2)0.7072 (2)0.70064 (19)0.0327
N30.3802 (2)0.63652 (18)0.69548 (19)0.0450
N20.6797 (2)0.8591 (2)0.11110 (17)0.0436
O10.6673 (2)0.97711 (19)0.05381 (15)0.0652
C130.7303 (2)0.98771 (19)0.70769 (18)0.0310
C170.5143 (2)0.61781 (18)0.67811 (19)0.0322
C120.9039 (2)0.9820 (2)0.70523 (19)0.0346
C140.7321 (2)0.45278 (19)0.72194 (19)0.0328
C110.9606 (2)0.8393 (2)0.7643 (2)0.0358
C150.6946 (3)0.3372 (2)0.9327 (2)0.0461
C160.8465 (4)0.3441 (3)0.9667 (3)0.0711
H910.68740.73640.80090.0307*
H510.72700.63930.26400.0374*
H310.66391.07870.26400.0358*
H710.87510.55680.48750.0395*
H720.71930.50650.46550.0388*
H1010.94540.61730.74600.0386*
H1020.98060.70000.60830.0399*
H1220.91911.06530.75430.0424*
H1210.96560.98900.61380.0425*
H1121.07370.83120.75310.0436*
H1110.90820.84050.85860.0444*
H1520.60750.34761.01240.0547*
H1510.69600.24670.88450.0545*
H1620.86190.26581.02690.0858*
H1610.84530.43661.00860.0858*
H1630.93460.33280.88750.0858*
H210.67831.08100.48140.0340*
H1310.66790.98830.79850.0380*
H1320.69901.07600.66390.0380*
U11U22U33U12U13U23
C10.0202 (8)0.0264 (9)0.0259 (9)−0.0011 (6)−0.0068 (7)−0.0010 (7)
N10.0338 (9)0.0213 (7)0.0269 (8)0.0003 (6)−0.0122 (7)−0.0028 (6)
O30.0480 (9)0.0337 (7)0.0313 (8)0.0038 (6)−0.0057 (6)0.0066 (6)
C90.0293 (9)0.0242 (8)0.0237 (9)−0.0009 (7)−0.0087 (7)0.0007 (7)
C20.0264 (9)0.0269 (9)0.0316 (10)−0.0020 (7)−0.0061 (8)0.0012 (7)
C60.0268 (9)0.0274 (9)0.0258 (9)−0.0008 (7)−0.0066 (7)0.0000 (7)
C50.0332 (10)0.0331 (10)0.0262 (9)−0.0035 (8)−0.0076 (8)−0.0024 (7)
C40.0301 (10)0.0422 (11)0.0206 (9)−0.0055 (8)−0.0058 (7)0.0036 (7)
O40.0801 (12)0.0323 (8)0.0403 (9)0.0185 (8)−0.0056 (8)0.0011 (6)
O20.0985 (15)0.0666 (11)0.0350 (9)−0.0240 (10)−0.0255 (9)−0.0007 (8)
C30.0245 (9)0.0345 (10)0.0313 (10)−0.0025 (7)−0.0048 (8)0.0086 (8)
C70.0452 (11)0.0265 (9)0.0259 (10)0.0021 (8)−0.0115 (9)−0.0037 (7)
C80.0326 (10)0.0233 (9)0.0276 (10)0.0006 (7)−0.0097 (8)0.0001 (7)
C100.0302 (10)0.0314 (10)0.0361 (11)0.0007 (8)−0.0101 (8)0.0039 (8)
N30.0402 (11)0.0384 (10)0.0596 (12)−0.0061 (8)−0.0174 (9)−0.0034 (8)
N20.0455 (11)0.0574 (12)0.0267 (9)−0.0062 (9)−0.0076 (8)0.0059 (8)
O10.0931 (14)0.0654 (11)0.0342 (9)0.0056 (10)−0.0195 (9)0.0154 (8)
C130.0372 (11)0.0257 (9)0.0320 (10)−0.0002 (8)−0.0132 (8)−0.0046 (7)
C170.0422 (12)0.0223 (9)0.0349 (10)−0.0051 (8)−0.0141 (9)−0.0009 (7)
C120.0362 (11)0.0338 (10)0.0358 (11)−0.0078 (8)−0.0110 (9)−0.0017 (8)
C140.0400 (11)0.0265 (9)0.0321 (10)−0.0015 (8)−0.0105 (9)0.0009 (8)
C110.0282 (10)0.0431 (11)0.0378 (11)−0.0062 (8)−0.0108 (8)0.0019 (9)
C150.0573 (14)0.0401 (12)0.0364 (12)0.0018 (10)−0.0088 (10)0.0141 (9)
C160.0735 (19)0.086 (2)0.0595 (17)−0.0018 (15)−0.0330 (15)0.0224 (14)
C1—N11.374 (2)C7—H720.971
C1—C21.412 (2)C8—C171.476 (3)
C1—C61.422 (2)C8—C141.541 (2)
N1—C91.472 (2)C10—C111.525 (3)
N1—C131.474 (2)C10—H1010.973
O3—C141.324 (2)C10—H1020.977
O3—C151.469 (2)N3—C171.143 (2)
C9—C81.546 (2)N2—O11.235 (2)
C9—C101.524 (3)C13—C121.520 (3)
C9—H910.983C13—H1310.970
C2—C31.375 (3)C13—H1320.970
C2—H210.941C12—C111.524 (3)
C6—C51.380 (2)C12—H1220.979
C6—C71.504 (2)C12—H1210.979
C5—C41.388 (3)C11—H1120.969
C5—H510.941C11—H1110.979
C4—C31.379 (3)C15—C161.482 (4)
C4—N21.446 (2)C15—H1520.979
O4—C141.194 (2)C15—H1510.987
O2—N21.229 (2)C16—H1620.966
C3—H310.942C16—H1610.969
C7—C81.526 (2)C16—H1630.980
C7—H710.985
N1—C1—C2121.61 (15)C11—C10—H101111.3
N1—C1—C6120.57 (15)C9—C10—H102109.0
C2—C1—C6117.69 (16)C11—C10—H102109.9
C1—N1—C9121.40 (13)H101—C10—H102109.1
C1—N1—C13122.69 (14)C4—N2—O2119.05 (17)
C9—N1—C13109.99 (13)C4—N2—O1118.60 (18)
C14—O3—C15117.40 (15)O2—N2—O1122.36 (18)
N1—C9—C8109.45 (14)N1—C13—C12110.21 (14)
N1—C9—C10110.06 (14)N1—C13—H131109.3
C8—C9—C10114.36 (14)C12—C13—H131109.3
N1—C9—H91107.0N1—C13—H132109.3
C8—C9—H91108.0C12—C13—H132109.3
C10—C9—H91107.7H131—C13—H132109.4
C1—C2—C3121.40 (16)C8—C17—N3178.4 (2)
C1—C2—H21119.3C13—C12—C11110.80 (15)
C3—C2—H21119.3C13—C12—H122109.2
C1—C6—C5120.13 (16)C11—C12—H122110.4
C1—C6—C7120.45 (15)C13—C12—H121109.0
C5—C6—C7119.41 (15)C11—C12—H121109.0
C6—C5—C4120.19 (16)H122—C12—H121108.5
C6—C5—H51119.8C8—C14—O3110.12 (15)
C4—C5—H51120.0C8—C14—O4123.73 (18)
C5—C4—C3120.93 (17)O3—C14—O4126.15 (17)
C5—C4—N2119.57 (17)C10—C11—C12111.70 (16)
C3—C4—N2119.49 (17)C10—C11—H112108.7
C4—C3—C2119.60 (16)C12—C11—H112110.4
C4—C3—H31119.5C10—C11—H111109.4
C2—C3—H31120.9C12—C11—H111107.7
C6—C7—C8110.18 (14)H112—C11—H111108.9
C6—C7—H71110.2O3—C15—C16110.69 (19)
C8—C7—H71108.6O3—C15—H152104.8
C6—C7—H72110.0C16—C15—H152110.0
C8—C7—H72110.7O3—C15—H151108.1
H71—C7—H72107.2C16—C15—H151111.3
C9—C8—C7109.74 (14)H152—C15—H151111.7
C9—C8—C17108.75 (14)C15—C16—H162109.3
C7—C8—C17109.52 (15)C15—C16—H161110.0
C9—C8—C14109.75 (14)H162—C16—H161109.0
C7—C8—C14111.10 (14)C15—C16—H163110.6
C17—C8—C14107.93 (15)H162—C16—H163108.3
C9—C10—C11109.16 (14)H161—C16—H163109.6
C9—C10—H101108.3
D—H···AD—HH···AD···AD—H···A
C7—H72···N3i0.972.563.492 (3)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H72⋯N3i0.972.563.492 (3)161

Symmetry code: (i) .

  6 in total

1.  Synthesis and biological activity of 7-phenyl-6,9-dihydro-3H-pyrrolo[3,2-f]quinolin-9-ones: a new class of antimitotic agents devoid of aromatase activity.

Authors:  Venusia Gasparotto; Ignazio Castagliuolo; Gianfranco Chiarelotto; Vincenzo Pezzi; Daniela Montanaro; Paola Brun; Giorgio Palù; Giampietro Viola; Maria Grazia Ferlin
Journal:  J Med Chem       Date:  2006-03-23       Impact factor: 7.446

Review 2.  Mitomycin C: a review.

Authors:  S T Crooke; W T Bradner
Journal:  Cancer Treat Rev       Date:  1976-09       Impact factor: 12.111

3.  Pyrrolo-quinoline derivatives as potential antineoplastic drugs.

Authors:  M G Ferlin; B Gatto; G Chiarelotto; M Palumbo
Journal:  Bioorg Med Chem       Date:  2000-06       Impact factor: 3.641

4.  Discovery of a new anilino-3H-pyrrolo[3,2-f]quinoline derivative as potential anti-cancer agent.

Authors:  L Dalla Via; O Gia; V Gasparotto; M G Ferlin
Journal:  Eur J Med Chem       Date:  2007-05-06       Impact factor: 6.514

5.  Methyl 4-methyl-2-oxo-1,2,5,6-tetra-hydro-4H-pyrrolo[3,2,1-ij]quinoline-6-carboxyl-ate.

Authors:  Yulia A Zhuravleva; Anatolij V Zimichev; Margarita N Zemtsova; Victor B Rybakov; Yurij N Klimochkin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-31

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total
  2 in total

1.  (E)-Ethyl 2-cyano-3-[5-nitro-2-(pyrrolidin-1-yl)phen-yl]acrylate.

Authors:  Yapi Marcellin Yapo; Bakary Coulibaly Abou; Ané Adjou; Rita Kakou-Yao; Jules A Tenon
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-04

2.  Ethyl 4-cyano-7-nitro-1,2,3,3a,4,5-hexa-hydro-pyrrolo-[1,2-a]quinoline-4-carboxyl-ate.

Authors:  Yvon Bibila Mayaya Bisseyou; Adéyolé Timotou; Ajouby Adjou; Rita Kakou-Yao; Jules Tenon Abodou
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-31
  2 in total

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