Literature DB >> 21585978

Characterization of microsatellite loci in the Hawaiian endemic shrub Schiedea adamantis (Caryophyllaceae) and amplification in related species and genera.

T M Culley1, S G Weller, A K Sakai, K A Putnam.   

Abstract

Schiedea adamantis is a rare, perennial shrub endemic to the Hawaiian island of Oahu where it consists of a single population. Using a nonradioactive protocol, 12 microsatellite primers were developed that consisted of di-, tri-, penta- and hexanucleotide repeats. Using multiplexed reactions, all but two primers exhibited polymorphism with an average of 3.67 alleles per primer. Most primers also amplified in 28 additional Schiedea species, revealing wide applicability across the genus; eight and nine primers also amplified in Honckenya peploides and Silene lanceolata, respectively, related genera in the Caryophyllaceae. This is the first known report of microsatellite primers developed in Schiedea.
© 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd.

Entities:  

Year:  2008        PMID: 21585978     DOI: 10.1111/j.1755-0998.2008.02161.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  12 in total

1.  Development and characterization of 12 polymorphic microsatellite loci in the sea sandwort, Honckenya peploides.

Authors:  Meg C Gravley; George K Sage; Sandra L Talbot; Matthew L Carlson
Journal:  J Plant Res       Date:  2018-04-23       Impact factor: 2.629

2.  Isolation of microsatellite loci in the African tree species Staudtia kamerunensis (Myristicaceae) using high-throughput sequencing.

Authors:  Samuel Vanden Abeele; Olivier J Hardy; Steven B Janssens
Journal:  Mol Biol Rep       Date:  2018-08-02       Impact factor: 2.316

3.  Asymmetrical gene flow in a hybrid zone of Hawaiian Schiedea (Caryophyllaceae) species with contrasting mating systems.

Authors:  Lisa E Wallace; Theresa M Culley; Stephen G Weller; Ann K Sakai; Ashley Kuenzi; Tilottama Roy; Warren L Wagner; Molly Nepokroeff
Journal:  PLoS One       Date:  2011-09-19       Impact factor: 3.240

4.  Microsatellite development and flow cytometry in the African tree genus Afzelia (Fabaceae, Caesalpinioideae) reveal a polyploid complex.

Authors:  Armel S L Donkpegan; Jean-Louis Doucet; Kasso Dainou; Olivier J Hardy
Journal:  Appl Plant Sci       Date:  2015-01-07       Impact factor: 1.936

5.  Microsatellite development for the genus Guibourtia (Fabaceae, Caesalpinioideae) reveals diploid and polyploid species.

Authors:  Felicien Tosso; Jean-Louis Doucet; Esra Kaymak; Kasso Daïnou; Jérôme Duminil; Olivier J Hardy
Journal:  Appl Plant Sci       Date:  2016-07-13       Impact factor: 1.936

6.  Polymorphic microsatellite loci for Haumania danckelmaniana and transferability to H. liebrechtsiana (Marantaceae).

Authors:  Alexandra C Ley; Olivier J Hardy
Journal:  Appl Plant Sci       Date:  2016-03-08       Impact factor: 1.936

7.  Characterization of microsatellite markers in two exploited African trees, Entandrophragma candollei and E. utile (Meliaceae).

Authors:  Franck S Monthe; Jérôme Duminil; Félicien Tosso; Jérémy Migliore; Olivier J Hardy
Journal:  Appl Plant Sci       Date:  2017-02-09       Impact factor: 1.936

8.  Isolation of nuclear microsatellites in the African timber tree Lophira alata (Ochnaceae) and cross-amplification in L. lanceolata.

Authors:  Rosalía Piñeiro; Adrien Staquet; Olivier J Hardy
Journal:  Appl Plant Sci       Date:  2015-10-14       Impact factor: 1.936

9.  A set of plastid loci for use in multiplex fragment length genotyping for intraspecific variation in Pinus (Pinaceae).

Authors:  Austin M Wofford; Kristen Finch; Adam Bigott; Ann Willyard
Journal:  Appl Plant Sci       Date:  2014-04-30       Impact factor: 1.936

10.  An efficient technique for primer development and application that integrates fluorescent labeling and multiplex PCR.

Authors:  Theresa M Culley; Trevor I Stamper; Richard L Stokes; Jessica R Brzyski; Nicole A Hardiman; Matthew R Klooster; Benjamin J Merritt
Journal:  Appl Plant Sci       Date:  2013-10-01       Impact factor: 1.936

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