| Literature DB >> 21583516 |
Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.
Abstract
The title compound, C(11)H(9)FO(3)S, was prepared by alkaline hydrolysis of ethyl 2-(5-fluoro-3-methyl-sulfanyl-1-benzofuran-2-yl)acetate. In the crystal structure, the carboxyl groups are involved in inter-molecular O-H⋯O hydrogen bonds, which link the mol-ecules into centrosymmetric dimers. These dimers are further packed into stacks along the b axis by inter-molecular C-H⋯O and C-H⋯F inter-actions.Entities:
Year: 2009 PMID: 21583516 PMCID: PMC2977173 DOI: 10.1107/S160053680902594X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H9FO3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3920 reflections |
| θ = 2.2–27.5° | |
| µ = 0.31 mm−1 | |
| β = 90.478 (1)° | Block, colourless |
| 0.40 × 0.40 × 0.20 mm | |
| Bruker SMART CCD diffractometer | 2015 independent reflections |
| Radiation source: fine-focus sealed tube | 1758 reflections with |
| graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 26.0°, θmin = 2.8° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 5774 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2015 reflections | (Δ/σ)max < 0.001 |
| 150 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| S | 0.31784 (5) | 0.316516 (15) | 0.58563 (8) | 0.02756 (13) | |
| F | 0.83216 (14) | 0.28556 (4) | −0.2451 (2) | 0.0378 (3) | |
| O1 | 0.59504 (15) | 0.43332 (4) | 0.3745 (2) | 0.0255 (3) | |
| O2 | 0.19605 (18) | 0.46681 (5) | 0.3551 (2) | 0.0343 (3) | |
| H2 | 0.102 (3) | 0.4823 (9) | 0.316 (4) | 0.047 (6)* | |
| O3 | 0.09836 (15) | 0.48144 (4) | 0.7637 (2) | 0.0268 (3) | |
| C1 | 0.4579 (2) | 0.36074 (6) | 0.4469 (3) | 0.0217 (3) | |
| C2 | 0.58779 (19) | 0.35365 (6) | 0.2404 (3) | 0.0211 (3) | |
| C3 | 0.6420 (2) | 0.31379 (6) | 0.0878 (3) | 0.0231 (3) | |
| H3 | 0.5921 | 0.2829 | 0.1067 | 0.028* | |
| C4 | 0.7740 (2) | 0.32324 (6) | −0.0924 (3) | 0.0251 (3) | |
| C5 | 0.8516 (2) | 0.36865 (6) | −0.1307 (3) | 0.0277 (4) | |
| H5 | 0.9394 | 0.3725 | −0.2575 | 0.033* | |
| C6 | 0.7982 (2) | 0.40828 (6) | 0.0203 (3) | 0.0264 (3) | |
| H6 | 0.8478 | 0.4392 | −0.0006 | 0.032* | |
| C7 | 0.6668 (2) | 0.39915 (6) | 0.2039 (3) | 0.0224 (3) | |
| C8 | 0.4683 (2) | 0.40835 (6) | 0.5179 (3) | 0.0232 (3) | |
| C9 | 0.3703 (2) | 0.43787 (6) | 0.7168 (3) | 0.0277 (4) | |
| H9A | 0.4513 | 0.4620 | 0.7909 | 0.033* | |
| H9B | 0.3345 | 0.4164 | 0.8594 | 0.033* | |
| C10 | 0.2076 (2) | 0.46410 (5) | 0.6137 (3) | 0.0219 (3) | |
| C11 | 0.1570 (2) | 0.30916 (8) | 0.3207 (3) | 0.0372 (4) | |
| H11A | 0.0973 | 0.3397 | 0.2896 | 0.056* | |
| H11B | 0.0715 | 0.2847 | 0.3690 | 0.056* | |
| H11C | 0.2169 | 0.2991 | 0.1627 | 0.056* |
| S | 0.0263 (2) | 0.0334 (2) | 0.0230 (2) | −0.00356 (16) | 0.00305 (15) | 0.00559 (16) |
| F | 0.0415 (6) | 0.0317 (5) | 0.0406 (6) | 0.0029 (4) | 0.0146 (5) | −0.0114 (4) |
| O1 | 0.0268 (6) | 0.0213 (5) | 0.0285 (6) | 0.0022 (4) | 0.0046 (5) | −0.0023 (4) |
| O2 | 0.0339 (7) | 0.0485 (8) | 0.0207 (6) | 0.0195 (6) | 0.0010 (5) | −0.0011 (5) |
| O3 | 0.0251 (6) | 0.0318 (6) | 0.0234 (6) | 0.0067 (5) | 0.0057 (4) | 0.0003 (4) |
| C1 | 0.0189 (7) | 0.0249 (8) | 0.0215 (7) | 0.0035 (6) | 0.0008 (6) | 0.0025 (6) |
| C2 | 0.0174 (7) | 0.0238 (8) | 0.0219 (7) | 0.0022 (6) | −0.0014 (6) | 0.0025 (6) |
| C3 | 0.0226 (8) | 0.0211 (7) | 0.0257 (8) | 0.0011 (6) | −0.0012 (6) | 0.0008 (6) |
| C4 | 0.0237 (8) | 0.0261 (8) | 0.0254 (8) | 0.0051 (6) | 0.0009 (6) | −0.0048 (6) |
| C5 | 0.0216 (8) | 0.0346 (9) | 0.0269 (8) | −0.0005 (7) | 0.0050 (6) | 0.0007 (7) |
| C6 | 0.0241 (8) | 0.0243 (8) | 0.0308 (8) | −0.0033 (6) | 0.0027 (6) | 0.0011 (6) |
| C7 | 0.0216 (8) | 0.0212 (7) | 0.0244 (7) | 0.0029 (6) | −0.0003 (6) | −0.0016 (6) |
| C8 | 0.0202 (8) | 0.0275 (8) | 0.0218 (7) | 0.0045 (6) | 0.0008 (6) | 0.0017 (6) |
| C9 | 0.0286 (9) | 0.0319 (9) | 0.0224 (8) | 0.0085 (7) | 0.0005 (6) | −0.0028 (6) |
| C10 | 0.0236 (8) | 0.0197 (7) | 0.0225 (7) | −0.0001 (6) | 0.0028 (6) | −0.0015 (6) |
| C11 | 0.0322 (10) | 0.0500 (11) | 0.0293 (9) | −0.0112 (8) | 0.0006 (7) | −0.0013 (8) |
| S—C1 | 1.753 (2) | C3—H3 | 0.9300 |
| S—C11 | 1.809 (2) | C4—C5 | 1.385 (2) |
| F—C4 | 1.361 (2) | C5—C6 | 1.386 (2) |
| O1—C8 | 1.382 (2) | C5—H5 | 0.9300 |
| O1—C7 | 1.384 (2) | C6—C7 | 1.385 (2) |
| O2—C10 | 1.312 (2) | C6—H6 | 0.9300 |
| O2—H2 | 0.84 (2) | C8—C9 | 1.489 (2) |
| O3—C10 | 1.219 (2) | C9—C10 | 1.507 (2) |
| C1—C8 | 1.352 (2) | C9—H9A | 0.9700 |
| C1—C2 | 1.449 (2) | C9—H9B | 0.9700 |
| C2—C7 | 1.391 (2) | C11—H11A | 0.9600 |
| C2—C3 | 1.398 (2) | C11—H11B | 0.9600 |
| C3—C4 | 1.378 (2) | C11—H11C | 0.9600 |
| C1—S—C11 | 100.36 (8) | O1—C7—C6 | 125.50 (14) |
| C8—O1—C7 | 105.54 (12) | O1—C7—C2 | 110.57 (13) |
| C10—O2—H2 | 107.9 (15) | C6—C7—C2 | 123.93 (14) |
| C8—C1—C2 | 106.38 (13) | C1—C8—O1 | 111.99 (13) |
| C8—C1—S | 126.22 (12) | C1—C8—C9 | 132.27 (15) |
| C2—C1—S | 127.38 (12) | O1—C8—C9 | 115.73 (14) |
| C7—C2—C3 | 119.76 (14) | C8—C9—C10 | 115.38 (13) |
| C7—C2—C1 | 105.51 (13) | C8—C9—H9A | 108.4 |
| C3—C2—C1 | 134.72 (14) | C10—C9—H9A | 108.4 |
| C4—C3—C2 | 115.75 (14) | C8—C9—H9B | 108.4 |
| C4—C3—H3 | 122.1 | C10—C9—H9B | 108.4 |
| C2—C3—H3 | 122.1 | H9A—C9—H9B | 107.5 |
| F—C4—C3 | 118.04 (14) | O3—C10—O2 | 123.98 (15) |
| F—C4—C5 | 117.43 (14) | O3—C10—C9 | 121.25 (14) |
| C3—C4—C5 | 124.53 (14) | O2—C10—C9 | 114.76 (13) |
| C4—C5—C6 | 119.90 (14) | S—C11—H11A | 109.5 |
| C4—C5—H5 | 120.0 | S—C11—H11B | 109.5 |
| C6—C5—H5 | 120.0 | H11A—C11—H11B | 109.5 |
| C7—C6—C5 | 116.12 (15) | S—C11—H11C | 109.5 |
| C7—C6—H6 | 121.9 | H11A—C11—H11C | 109.5 |
| C5—C6—H6 | 121.9 | H11B—C11—H11C | 109.5 |
| C11—S—C1—C8 | 107.19 (15) | C5—C6—C7—C2 | −0.6 (2) |
| C11—S—C1—C2 | −74.59 (15) | C3—C2—C7—O1 | −179.70 (13) |
| C8—C1—C2—C7 | −0.23 (17) | C1—C2—C7—O1 | 0.38 (17) |
| S—C1—C2—C7 | −178.73 (12) | C3—C2—C7—C6 | 0.6 (2) |
| C8—C1—C2—C3 | 179.87 (17) | C1—C2—C7—C6 | −179.33 (15) |
| S—C1—C2—C3 | 1.4 (3) | C2—C1—C8—O1 | −0.01 (17) |
| C7—C2—C3—C4 | 0.0 (2) | S—C1—C8—O1 | 178.52 (11) |
| C1—C2—C3—C4 | 179.93 (16) | C2—C1—C8—C9 | 179.85 (16) |
| C2—C3—C4—F | 179.70 (14) | S—C1—C8—C9 | −1.6 (3) |
| C2—C3—C4—C5 | −0.7 (2) | C7—O1—C8—C1 | 0.24 (17) |
| F—C4—C5—C6 | −179.66 (14) | C7—O1—C8—C9 | −179.65 (13) |
| C3—C4—C5—C6 | 0.7 (3) | C1—C8—C9—C10 | −92.8 (2) |
| C4—C5—C6—C7 | −0.1 (2) | O1—C8—C9—C10 | 87.07 (18) |
| C8—O1—C7—C6 | 179.32 (15) | C8—C9—C10—O3 | 165.74 (15) |
| C8—O1—C7—C2 | −0.39 (16) | C8—C9—C10—O2 | −14.8 (2) |
| C5—C6—C7—O1 | 179.77 (14) |
| H··· | ||||
| C6—H6···O3i | 0.93 | 2.52 | 3.2896 (19) | 141 |
| C6—H6···O3ii | 0.93 | 2.51 | 3.296 (2) | 143 |
| O2—H2···O3iii | 0.84 (2) | 1.85 (2) | 2.6902 (17) | 178 (2) |
| C11—H11B···Fiv | 0.96 | 2.69 | 3.572 (2) | 153 |
| C11—H11B···Fv | 0.96 | 2.67 | 3.361 (2) | 130 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C6—H6⋯O3i | 0.93 | 2.52 | 3.2896 (19) | 141 |
| C6—H6⋯O3ii | 0.93 | 2.51 | 3.296 (2) | 143 |
| O2—H2⋯O3iii | 0.84 (2) | 1.85 (2) | 2.6902 (17) | 178 (2) |
| C11—H11 | 0.96 | 2.69 | 3.572 (2) | 153 |
| C11—H11 | 0.96 | 2.67 | 3.361 (2) | 130 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .