| Literature DB >> 21583191 |
Ding Ye1, Kuan Zhang, Hua-Feng Chen, Shu-Fan Yin, Ying Li.
Abstract
The title compound, C(21)H(24)O(11), crystallizes exclusively as the β-anomer. The substituent of the protected sugar at position C-3 is in the axial position, while all other groups are in equatorial positions. The pyran-oside ring adopts a stable chair conformation.Entities:
Year: 2009 PMID: 21583191 PMCID: PMC2969774 DOI: 10.1107/S1600536809018248
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H24O11 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 33 reflections |
| θ = 4.6–9.4° | |
| µ = 0.11 mm−1 | |
| β = 102.80 (4)° | Block, colourless |
| 0.44 × 0.42 × 0.20 mm | |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 32.5°, θmin = 2.3° |
| graphite | |
| ω/2θ scans | |
| 4596 measured reflections | |
| 4149 independent reflections | 3 standard reflections every 150 reflections |
| 2143 reflections with | intensity decay: 3.7% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4149 reflections | (Δ/σ)max < 0.001 |
| 293 parameters | Δρmax = 0.30 e Å−3 |
| 1 restraint | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.4950 (3) | 0.63276 (10) | 0.1617 (2) | 0.0399 (4) | |
| O2 | 0.2064 (3) | 0.55171 (14) | −0.0604 (2) | 0.0526 (5) | |
| O3 | 0.3692 (5) | 0.62506 (18) | −0.1903 (3) | 0.0857 (9) | |
| O4 | 0.2271 (3) | 0.48018 (11) | 0.2871 (2) | 0.0436 (4) | |
| O5 | −0.0540 (3) | 0.52455 (15) | 0.3289 (4) | 0.0733 (8) | |
| O6 | 0.5256 (3) | 0.54679 (12) | 0.5011 (2) | 0.0446 (4) | |
| O7 | 0.3283 (4) | 0.48347 (14) | 0.6212 (3) | 0.0657 (7) | |
| O8 | 0.5465 (3) | 0.69998 (12) | 0.5428 (2) | 0.0468 (5) | |
| O9 | 0.2909 (5) | 0.7687 (2) | 0.5597 (4) | 0.1025 (12) | |
| O10 | 0.6171 (3) | 0.74339 (10) | 0.2628 (2) | 0.0415 (4) | |
| O11 | 1.2834 (4) | 0.88786 (18) | −0.0222 (3) | 0.0780 (8) | |
| C1 | 0.5854 (4) | 0.66770 (14) | 0.2979 (3) | 0.0370 (5) | |
| H1 | 0.7070 | 0.6424 | 0.3454 | 0.044* | |
| C2 | 0.4428 (4) | 0.67009 (15) | 0.4018 (3) | 0.0385 (6) | |
| H2 | 0.3343 | 0.7036 | 0.3589 | 0.046* | |
| C3 | 0.3648 (4) | 0.59176 (16) | 0.4229 (3) | 0.0394 (6) | |
| H3 | 0.2627 | 0.5944 | 0.4801 | 0.047* | |
| C4 | 0.2873 (4) | 0.55657 (15) | 0.2697 (3) | 0.0388 (6) | |
| H4 | 0.1757 | 0.5858 | 0.2156 | 0.047* | |
| C5 | 0.4441 (4) | 0.55511 (15) | 0.1781 (3) | 0.0382 (6) | |
| H5 | 0.5581 | 0.5283 | 0.2352 | 0.046* | |
| C6 | 0.3858 (4) | 0.52131 (17) | 0.0245 (3) | 0.0482 (7) | |
| H6A | 0.4876 | 0.5304 | −0.0293 | 0.058* | |
| H6B | 0.3723 | 0.4673 | 0.0338 | 0.058* | |
| C7 | 0.2171 (6) | 0.6017 (2) | −0.1706 (4) | 0.0620 (9) | |
| C8 | 0.0234 (7) | 0.6216 (3) | −0.2607 (5) | 0.0897 (13) | |
| H8A | 0.0274 | 0.6713 | −0.3014 | 0.135* | |
| H8B | −0.0694 | 0.6204 | −0.1981 | 0.135* | |
| H8C | −0.0141 | 0.5862 | −0.3412 | 0.135* | |
| C9 | 0.0503 (4) | 0.47285 (19) | 0.3242 (4) | 0.0528 (8) | |
| C10 | 0.0162 (6) | 0.3927 (2) | 0.3635 (5) | 0.0743 (11) | |
| H10A | 0.0886 | 0.3821 | 0.4634 | 0.111* | |
| H10B | 0.0578 | 0.3596 | 0.2937 | 0.111* | |
| H10C | −0.1198 | 0.3851 | 0.3586 | 0.111* | |
| C11 | 0.4840 (5) | 0.49291 (18) | 0.5944 (3) | 0.0535 (8) | |
| C12 | 0.6629 (7) | 0.4484 (3) | 0.6583 (6) | 0.0856 (13) | |
| H12A | 0.7167 | 0.4648 | 0.7591 | 0.128* | |
| H12B | 0.7566 | 0.4557 | 0.5978 | 0.128* | |
| H12C | 0.6303 | 0.3959 | 0.6590 | 0.128* | |
| C13 | 0.4540 (5) | 0.75101 (18) | 0.6110 (4) | 0.0563 (8) | |
| C14 | 0.5769 (7) | 0.7780 (3) | 0.7549 (5) | 0.0842 (13) | |
| H14A | 0.5345 | 0.8273 | 0.7771 | 0.126* | |
| H14B | 0.7100 | 0.7804 | 0.7465 | 0.126* | |
| H14C | 0.5656 | 0.7439 | 0.8341 | 0.126* | |
| C15 | 0.7685 (4) | 0.75945 (14) | 0.1960 (3) | 0.0359 (5) | |
| C16 | 0.8011 (4) | 0.83541 (16) | 0.1761 (3) | 0.0430 (6) | |
| H16 | 0.7223 | 0.8714 | 0.2069 | 0.052* | |
| C17 | 0.9503 (4) | 0.85760 (16) | 0.1108 (3) | 0.0453 (7) | |
| H17 | 0.9704 | 0.9085 | 0.0961 | 0.054* | |
| C18 | 1.0703 (4) | 0.80472 (17) | 0.0669 (3) | 0.0417 (6) | |
| C19 | 1.0361 (4) | 0.72875 (17) | 0.0863 (3) | 0.0460 (7) | |
| H19 | 1.1167 | 0.6930 | 0.0568 | 0.055* | |
| C20 | 0.8838 (4) | 0.70516 (16) | 0.1487 (3) | 0.0443 (6) | |
| H20 | 0.8594 | 0.6542 | 0.1587 | 0.053* | |
| C21 | 1.2373 (5) | 0.8255 (2) | 0.0018 (4) | 0.0587 (8) | |
| H21 | 1.3126 | 0.7864 | −0.0224 | 0.070* |
| O1 | 0.0456 (10) | 0.0342 (9) | 0.0435 (10) | −0.0048 (8) | 0.0178 (8) | 0.0015 (8) |
| O2 | 0.0535 (12) | 0.0559 (12) | 0.0508 (11) | −0.0077 (10) | 0.0171 (10) | −0.0018 (10) |
| O3 | 0.101 (2) | 0.085 (2) | 0.0768 (18) | −0.0286 (18) | 0.0309 (15) | 0.0115 (15) |
| O4 | 0.0422 (10) | 0.0337 (10) | 0.0598 (11) | −0.0029 (8) | 0.0218 (9) | 0.0005 (9) |
| O5 | 0.0492 (13) | 0.0593 (16) | 0.121 (2) | 0.0022 (12) | 0.0392 (14) | 0.0042 (15) |
| O6 | 0.0462 (11) | 0.0442 (10) | 0.0462 (10) | 0.0045 (9) | 0.0162 (8) | 0.0099 (8) |
| O7 | 0.0768 (17) | 0.0592 (15) | 0.0691 (15) | −0.0078 (13) | 0.0330 (13) | 0.0151 (13) |
| O8 | 0.0454 (11) | 0.0481 (11) | 0.0502 (11) | −0.0016 (9) | 0.0177 (9) | −0.0086 (9) |
| O9 | 0.102 (2) | 0.109 (3) | 0.097 (2) | 0.049 (2) | 0.0209 (18) | −0.0315 (19) |
| O10 | 0.0459 (10) | 0.0294 (9) | 0.0559 (11) | 0.0004 (8) | 0.0257 (9) | 0.0009 (8) |
| O11 | 0.0760 (18) | 0.0810 (19) | 0.0855 (19) | −0.0344 (15) | 0.0361 (15) | −0.0012 (15) |
| C1 | 0.0399 (13) | 0.0320 (12) | 0.0432 (13) | −0.0019 (10) | 0.0176 (11) | 0.0001 (11) |
| C2 | 0.0402 (14) | 0.0360 (13) | 0.0427 (13) | 0.0008 (11) | 0.0167 (11) | −0.0013 (11) |
| C3 | 0.0367 (13) | 0.0387 (13) | 0.0478 (14) | 0.0010 (11) | 0.0197 (11) | 0.0035 (12) |
| C4 | 0.0374 (13) | 0.0300 (12) | 0.0521 (15) | −0.0012 (11) | 0.0166 (11) | 0.0027 (11) |
| C5 | 0.0399 (14) | 0.0329 (13) | 0.0465 (14) | −0.0001 (11) | 0.0195 (11) | 0.0010 (11) |
| C6 | 0.0526 (17) | 0.0426 (15) | 0.0540 (17) | −0.0005 (13) | 0.0216 (14) | −0.0051 (13) |
| C7 | 0.086 (3) | 0.0523 (19) | 0.0521 (18) | −0.0007 (18) | 0.0236 (18) | −0.0051 (15) |
| C8 | 0.099 (3) | 0.102 (3) | 0.063 (2) | 0.017 (3) | 0.006 (2) | 0.004 (2) |
| C9 | 0.0444 (16) | 0.0487 (18) | 0.070 (2) | −0.0114 (15) | 0.0227 (14) | −0.0075 (16) |
| C10 | 0.078 (3) | 0.049 (2) | 0.105 (3) | −0.0242 (19) | 0.039 (2) | 0.005 (2) |
| C11 | 0.068 (2) | 0.0462 (17) | 0.0481 (16) | 0.0011 (15) | 0.0168 (15) | 0.0058 (14) |
| C12 | 0.089 (3) | 0.079 (3) | 0.088 (3) | 0.020 (2) | 0.018 (2) | 0.032 (2) |
| C13 | 0.070 (2) | 0.0432 (17) | 0.0644 (19) | 0.0026 (16) | 0.0339 (17) | −0.0080 (15) |
| C14 | 0.096 (3) | 0.090 (3) | 0.077 (2) | −0.037 (3) | 0.041 (2) | −0.036 (2) |
| C15 | 0.0365 (13) | 0.0345 (13) | 0.0379 (13) | −0.0017 (10) | 0.0108 (10) | 0.0020 (10) |
| C16 | 0.0446 (15) | 0.0302 (13) | 0.0559 (17) | −0.0023 (11) | 0.0148 (13) | −0.0053 (12) |
| C17 | 0.0479 (16) | 0.0354 (14) | 0.0534 (16) | −0.0104 (12) | 0.0132 (13) | −0.0016 (12) |
| C18 | 0.0395 (13) | 0.0463 (16) | 0.0408 (13) | −0.0058 (12) | 0.0125 (11) | 0.0022 (12) |
| C19 | 0.0489 (16) | 0.0406 (15) | 0.0530 (16) | 0.0063 (13) | 0.0210 (13) | 0.0013 (12) |
| C20 | 0.0501 (15) | 0.0312 (13) | 0.0568 (16) | 0.0019 (12) | 0.0230 (13) | 0.0011 (12) |
| C21 | 0.0525 (18) | 0.070 (2) | 0.0581 (18) | −0.0109 (17) | 0.0212 (15) | 0.0046 (17) |
| O1—C1 | 1.409 (3) | C7—C8 | 1.474 (6) |
| O1—C5 | 1.441 (3) | C8—H8A | 0.9600 |
| O2—C7 | 1.356 (4) | C8—H8B | 0.9600 |
| O2—C6 | 1.435 (4) | C8—H8C | 0.9600 |
| O3—C7 | 1.201 (5) | C9—C10 | 1.500 (5) |
| O4—C9 | 1.369 (4) | C10—H10A | 0.9600 |
| O4—C4 | 1.441 (3) | C10—H10B | 0.9600 |
| O5—C9 | 1.184 (4) | C10—H10C | 0.9600 |
| O6—C11 | 1.356 (4) | C11—C12 | 1.494 (5) |
| O6—C3 | 1.441 (4) | C12—H12A | 0.9600 |
| O7—C11 | 1.189 (4) | C12—H12B | 0.9600 |
| O8—C13 | 1.347 (4) | C12—H12C | 0.9600 |
| O8—C2 | 1.435 (3) | C13—C14 | 1.484 (5) |
| O9—C13 | 1.185 (5) | C14—H14A | 0.9600 |
| O10—C15 | 1.372 (3) | C14—H14B | 0.9600 |
| O10—C1 | 1.411 (3) | C14—H14C | 0.9600 |
| O11—C21 | 1.188 (5) | C15—C16 | 1.387 (4) |
| C1—C2 | 1.529 (3) | C15—C20 | 1.391 (4) |
| C1—H1 | 0.9800 | C16—C17 | 1.377 (4) |
| C2—C3 | 1.524 (4) | C16—H16 | 0.9300 |
| C2—H2 | 0.9800 | C17—C18 | 1.382 (4) |
| C3—C4 | 1.519 (4) | C17—H17 | 0.9300 |
| C3—H3 | 0.9800 | C18—C19 | 1.389 (4) |
| C4—C5 | 1.528 (3) | C18—C21 | 1.479 (4) |
| C4—H4 | 0.9800 | C19—C20 | 1.388 (4) |
| C5—C6 | 1.497 (4) | C19—H19 | 0.9300 |
| C5—H5 | 0.9800 | C20—H20 | 0.9300 |
| C6—H6A | 0.9700 | C21—H21 | 0.9300 |
| C6—H6B | 0.9700 | ||
| C1—O1—C5 | 113.85 (19) | H8B—C8—H8C | 109.5 |
| C7—O2—C6 | 117.3 (3) | O5—C9—O4 | 122.9 (3) |
| C9—O4—C4 | 115.1 (2) | O5—C9—C10 | 126.4 (3) |
| C11—O6—C3 | 116.5 (2) | O4—C9—C10 | 110.7 (3) |
| C13—O8—C2 | 117.4 (2) | C9—C10—H10A | 109.5 |
| C15—O10—C1 | 118.5 (2) | C9—C10—H10B | 109.5 |
| O1—C1—O10 | 106.5 (2) | H10A—C10—H10B | 109.5 |
| O1—C1—C2 | 109.2 (2) | C9—C10—H10C | 109.5 |
| O10—C1—C2 | 105.9 (2) | H10A—C10—H10C | 109.5 |
| O1—C1—H1 | 111.7 | H10B—C10—H10C | 109.5 |
| O10—C1—H1 | 111.7 | O7—C11—O6 | 124.5 (3) |
| C2—C1—H1 | 111.7 | O7—C11—C12 | 125.8 (3) |
| O8—C2—C3 | 110.5 (2) | O6—C11—C12 | 109.7 (3) |
| O8—C2—C1 | 107.0 (2) | C11—C12—H12A | 109.5 |
| C3—C2—C1 | 111.0 (2) | C11—C12—H12B | 109.5 |
| O8—C2—H2 | 109.4 | H12A—C12—H12B | 109.5 |
| C3—C2—H2 | 109.4 | C11—C12—H12C | 109.5 |
| C1—C2—H2 | 109.4 | H12A—C12—H12C | 109.5 |
| O6—C3—C4 | 108.2 (2) | H12B—C12—H12C | 109.5 |
| O6—C3—C2 | 107.6 (2) | O9—C13—O8 | 121.5 (3) |
| C4—C3—C2 | 109.0 (2) | O9—C13—C14 | 126.2 (3) |
| O6—C3—H3 | 110.7 | O8—C13—C14 | 112.2 (3) |
| C4—C3—H3 | 110.7 | C13—C14—H14A | 109.5 |
| C2—C3—H3 | 110.7 | C13—C14—H14B | 109.5 |
| O4—C4—C3 | 109.9 (2) | H14A—C14—H14B | 109.5 |
| O4—C4—C5 | 108.1 (2) | C13—C14—H14C | 109.5 |
| C3—C4—C5 | 110.7 (2) | H14A—C14—H14C | 109.5 |
| O4—C4—H4 | 109.3 | H14B—C14—H14C | 109.5 |
| C3—C4—H4 | 109.3 | O10—C15—C16 | 115.4 (2) |
| C5—C4—H4 | 109.3 | O10—C15—C20 | 124.1 (2) |
| O1—C5—C6 | 108.0 (2) | C16—C15—C20 | 120.5 (2) |
| O1—C5—C4 | 105.6 (2) | C17—C16—C15 | 120.0 (3) |
| C6—C5—C4 | 115.9 (2) | C17—C16—H16 | 120.0 |
| O1—C5—H5 | 109.0 | C15—C16—H16 | 120.0 |
| C6—C5—H5 | 109.0 | C16—C17—C18 | 120.5 (3) |
| C4—C5—H5 | 109.0 | C16—C17—H17 | 119.8 |
| O2—C6—C5 | 112.4 (2) | C18—C17—H17 | 119.8 |
| O2—C6—H6A | 109.1 | C17—C18—C19 | 119.2 (3) |
| C5—C6—H6A | 109.1 | C17—C18—C21 | 122.7 (3) |
| O2—C6—H6B | 109.1 | C19—C18—C21 | 118.0 (3) |
| C5—C6—H6B | 109.1 | C20—C19—C18 | 121.2 (3) |
| H6A—C6—H6B | 107.8 | C20—C19—H19 | 119.4 |
| O3—C7—O2 | 122.4 (4) | C18—C19—H19 | 119.4 |
| O3—C7—C8 | 125.6 (4) | C19—C20—C15 | 118.6 (3) |
| O2—C7—C8 | 111.9 (4) | C19—C20—H20 | 120.7 |
| C7—C8—H8A | 109.5 | C15—C20—H20 | 120.7 |
| C7—C8—H8B | 109.5 | O11—C21—C18 | 125.6 (4) |
| H8A—C8—H8B | 109.5 | O11—C21—H21 | 117.2 |
| C7—C8—H8C | 109.5 | C18—C21—H21 | 117.2 |
| H8A—C8—H8C | 109.5 | ||
| C5—O1—C1—O10 | −177.44 (19) | C3—C4—C5—C6 | 179.7 (2) |
| C5—O1—C1—C2 | −63.6 (3) | C7—O2—C6—C5 | 104.7 (3) |
| C15—O10—C1—O1 | −76.9 (3) | O1—C5—C6—O2 | −68.4 (3) |
| C15—O10—C1—C2 | 167.0 (2) | C4—C5—C6—O2 | 49.8 (3) |
| C13—O8—C2—C3 | −101.7 (3) | C6—O2—C7—O3 | −6.0 (5) |
| C13—O8—C2—C1 | 137.3 (2) | C6—O2—C7—C8 | 173.2 (3) |
| O1—C1—C2—O8 | 175.1 (2) | C4—O4—C9—O5 | 6.4 (5) |
| O10—C1—C2—O8 | −70.7 (3) | C4—O4—C9—C10 | −171.0 (3) |
| O1—C1—C2—C3 | 54.4 (3) | C3—O6—C11—O7 | −4.2 (5) |
| O10—C1—C2—C3 | 168.6 (2) | C3—O6—C11—C12 | 176.3 (3) |
| C11—O6—C3—C4 | −94.4 (3) | C2—O8—C13—O9 | 2.7 (5) |
| C11—O6—C3—C2 | 148.0 (2) | C2—O8—C13—C14 | −179.5 (3) |
| O8—C2—C3—O6 | −53.2 (3) | C1—O10—C15—C16 | −174.9 (2) |
| C1—C2—C3—O6 | 65.4 (3) | C1—O10—C15—C20 | 5.6 (4) |
| O8—C2—C3—C4 | −170.2 (2) | O10—C15—C16—C17 | 179.6 (2) |
| C1—C2—C3—C4 | −51.7 (3) | C20—C15—C16—C17 | −0.8 (4) |
| C9—O4—C4—C3 | 78.4 (3) | C15—C16—C17—C18 | −1.1 (4) |
| C9—O4—C4—C5 | −160.6 (2) | C16—C17—C18—C19 | 1.5 (4) |
| O6—C3—C4—O4 | 58.7 (2) | C16—C17—C18—C21 | −177.5 (3) |
| C2—C3—C4—O4 | 175.4 (2) | C17—C18—C19—C20 | 0.0 (4) |
| O6—C3—C4—C5 | −60.7 (3) | C21—C18—C19—C20 | 179.1 (3) |
| C2—C3—C4—C5 | 56.0 (3) | C18—C19—C20—C15 | −1.9 (4) |
| C1—O1—C5—C6 | −169.3 (2) | O10—C15—C20—C19 | −178.2 (3) |
| C1—O1—C5—C4 | 66.1 (3) | C16—C15—C20—C19 | 2.3 (4) |
| O4—C4—C5—O1 | 178.8 (2) | C17—C18—C21—O11 | −1.5 (5) |
| C3—C4—C5—O1 | −60.7 (3) | C19—C18—C21—O11 | 179.4 (3) |
| O4—C4—C5—C6 | 59.3 (3) |