Literature DB >> 21581854

(E)-1-[4-(Dimethyl-amino)benzyl-idene]thio-semicarbazide.

Yuying Sun, Shizhou Fu, Junhong Zhang, Xiao Wang, Daqi Wang.   

Abstract

In the title mol-ecule, C(10)H(14)N(4)S, the thio-rea plane and benzene ring form a dihedral angle of 16.0 (3) Å. In the crystal structure, inter-molecular N-H⋯S hydrogen bonds link the mol-ecules into ribbons extended in the [100] direction; these incorporate inversion dimers.

Entities:  

Year:  2009        PMID: 21581854      PMCID: PMC2968255          DOI: 10.1107/S1600536808043778

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biomedical properties of thio­semicarbazones, see: Beraldo & Gambino (2004 ▶); Bondock et al. (2007 ▶). For the crystal structure of the related compound benzyl N′-(2-chloro­benzyl­idene)hydrazinecarbodithio­ate, see Shi et al. (2008 ▶).

Experimental

Crystal data

C10H14N4S M = 222.31 Monoclinic, a = 5.6984 (13) Å b = 8.9493 (14) Å c = 22.813 (2) Å β = 93.860 (2)° V = 1160.7 (3) Å3 Z = 4 Mo Kα radiation μ = 0.25 mm−1 T = 298 (2) K 0.50 × 0.48 × 0.26 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.884, T max = 0.937 5769 measured reflections 2047 independent reflections 1435 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.110 S = 1.02 2047 reflections 137 parameters H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.20 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808043778/cv2492sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808043778/cv2492Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H14N4SF(000) = 472
Mr = 222.31Dx = 1.272 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 5.6984 (13) ÅCell parameters from 2093 reflections
b = 8.9493 (14) Åθ = 2.5–25.9°
c = 22.813 (2) ŵ = 0.25 mm1
β = 93.860 (2)°T = 298 K
V = 1160.7 (3) Å3Block, orange
Z = 40.50 × 0.48 × 0.26 mm
Bruker SMART CCD area-detector diffractometer2047 independent reflections
Radiation source: fine-focus sealed tube1435 reflections with I > 2σ(I)
graphiteRint = 0.037
φ and ω scansθmax = 25.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −6→6
Tmin = 0.884, Tmax = 0.937k = −10→10
5769 measured reflectionsl = −27→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039H-atom parameters constrained
wR(F2) = 0.110w = 1/[σ2(Fo2) + (0.0432P)2 + 0.4004P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
2047 reflectionsΔρmax = 0.17 e Å3
137 parametersΔρmin = −0.20 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.027 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.9364 (3)0.1808 (2)0.14592 (8)0.0544 (5)
H11.04420.23900.16110.065*
N20.7454 (3)0.1467 (2)0.17756 (8)0.0497 (5)
N30.7772 (3)0.0474 (2)0.06910 (8)0.0583 (6)
H3A0.65480.03490.08870.070*
H3B0.78200.00930.03460.070*
N40.0633 (3)0.1090 (2)0.39241 (9)0.0621 (6)
S11.20240 (11)0.15551 (9)0.05735 (3)0.0708 (3)
C10.9570 (4)0.1249 (2)0.09195 (9)0.0473 (5)
C20.7371 (4)0.2136 (3)0.22678 (9)0.0510 (6)
H20.85390.28290.23740.061*
C30.5554 (4)0.1872 (2)0.26677 (9)0.0470 (5)
C40.5549 (4)0.2699 (3)0.31838 (10)0.0560 (6)
H40.66760.34410.32530.067*
C50.3937 (4)0.2457 (3)0.35945 (10)0.0573 (6)
H50.39850.30440.39320.069*
C60.2228 (4)0.1346 (2)0.35143 (9)0.0483 (5)
C70.2210 (4)0.0514 (3)0.29886 (9)0.0528 (6)
H70.1082−0.02260.29160.063*
C80.3831 (4)0.0782 (3)0.25809 (9)0.0507 (6)
H80.37710.02170.22380.061*
C9−0.1011 (4)−0.0139 (3)0.38610 (12)0.0684 (7)
H9A−0.1877−0.00740.34860.103*
H9B−0.2082−0.00920.41680.103*
H9C−0.0166−0.10670.38870.103*
C100.0832 (6)0.1853 (3)0.44832 (12)0.0900 (10)
H10A0.21930.14950.47110.135*
H10B−0.05490.16640.46900.135*
H10C0.09840.29080.44190.135*
U11U22U33U12U13U23
N10.0517 (11)0.0650 (13)0.0474 (11)−0.0059 (9)0.0093 (9)−0.0067 (10)
N20.0506 (10)0.0566 (12)0.0425 (10)0.0063 (9)0.0089 (8)0.0035 (9)
N30.0458 (10)0.0862 (15)0.0438 (11)−0.0059 (10)0.0098 (8)−0.0078 (10)
N40.0661 (12)0.0674 (14)0.0547 (12)−0.0014 (10)0.0186 (10)−0.0096 (10)
S10.0521 (4)0.0967 (6)0.0658 (5)−0.0157 (3)0.0204 (3)−0.0145 (4)
C10.0442 (12)0.0545 (14)0.0433 (12)0.0065 (10)0.0034 (9)0.0047 (10)
C20.0608 (13)0.0469 (13)0.0454 (13)0.0028 (11)0.0048 (11)0.0003 (10)
C30.0582 (13)0.0433 (13)0.0396 (12)0.0080 (10)0.0041 (10)0.0000 (10)
C40.0701 (15)0.0447 (13)0.0541 (14)−0.0055 (11)0.0105 (12)−0.0073 (11)
C50.0776 (16)0.0499 (14)0.0455 (13)0.0010 (12)0.0125 (12)−0.0134 (11)
C60.0521 (12)0.0480 (13)0.0450 (13)0.0087 (10)0.0042 (10)−0.0018 (10)
C70.0521 (12)0.0561 (15)0.0499 (13)−0.0030 (11)0.0018 (10)−0.0084 (11)
C80.0583 (13)0.0545 (14)0.0389 (12)0.0055 (11)−0.0010 (10)−0.0095 (10)
C90.0647 (15)0.0705 (17)0.0714 (17)−0.0004 (13)0.0154 (13)0.0057 (14)
C100.118 (2)0.088 (2)0.0690 (19)−0.0113 (18)0.0441 (17)−0.0195 (16)
N1—C11.342 (3)C4—C51.372 (3)
N1—N21.380 (2)C4—H40.9300
N1—H10.8600C5—C61.396 (3)
N2—C21.276 (3)C5—H50.9300
N3—C11.315 (3)C6—C71.411 (3)
N3—H3A0.8600C7—C81.375 (3)
N3—H3B0.8600C7—H70.9300
N4—C61.366 (3)C8—H80.9300
N4—C101.445 (3)C9—H9A0.9600
N4—C91.446 (3)C9—H9B0.9600
S1—C11.674 (2)C9—H9C0.9600
C2—C31.445 (3)C10—H10A0.9600
C2—H20.9300C10—H10B0.9600
C3—C81.389 (3)C10—H10C0.9600
C3—C41.391 (3)
C1—N1—N2121.22 (18)C4—C5—H5119.5
C1—N1—H1119.4C6—C5—H5119.5
N2—N1—H1119.4N4—C6—C5121.3 (2)
C2—N2—N1115.69 (19)N4—C6—C7121.8 (2)
C1—N3—H3A120.0C5—C6—C7116.9 (2)
C1—N3—H3B120.0C8—C7—C6121.1 (2)
H3A—N3—H3B120.0C8—C7—H7119.5
C6—N4—C10120.6 (2)C6—C7—H7119.5
C6—N4—C9121.0 (2)C7—C8—C3121.8 (2)
C10—N4—C9117.4 (2)C7—C8—H8119.1
N3—C1—N1116.51 (19)C3—C8—H8119.1
N3—C1—S1123.55 (17)N4—C9—H9A109.5
N1—C1—S1119.94 (17)N4—C9—H9B109.5
N2—C2—C3123.3 (2)H9A—C9—H9B109.5
N2—C2—H2118.3N4—C9—H9C109.5
C3—C2—H2118.3H9A—C9—H9C109.5
C8—C3—C4116.9 (2)H9B—C9—H9C109.5
C8—C3—C2123.7 (2)N4—C10—H10A109.5
C4—C3—C2119.3 (2)N4—C10—H10B109.5
C5—C4—C3122.3 (2)H10A—C10—H10B109.5
C5—C4—H4118.9N4—C10—H10C109.5
C3—C4—H4118.9H10A—C10—H10C109.5
C4—C5—C6121.1 (2)H10B—C10—H10C109.5
C1—N1—N2—C2−175.76 (19)C9—N4—C6—C5−175.0 (2)
N2—N1—C1—N35.8 (3)C10—N4—C6—C7173.9 (2)
N2—N1—C1—S1−174.31 (15)C9—N4—C6—C75.8 (3)
N1—N2—C2—C3−177.43 (18)C4—C5—C6—N4179.4 (2)
N2—C2—C3—C85.5 (3)C4—C5—C6—C7−1.4 (3)
N2—C2—C3—C4−177.3 (2)N4—C6—C7—C8−179.8 (2)
C8—C3—C4—C50.4 (3)C5—C6—C7—C80.9 (3)
C2—C3—C4—C5−177.0 (2)C6—C7—C8—C30.2 (3)
C3—C4—C5—C60.7 (4)C4—C3—C8—C7−0.8 (3)
C10—N4—C6—C5−6.9 (4)C2—C3—C8—C7176.4 (2)
D—H···AD—HH···AD···AD—H···A
N3—H3A···S1i0.862.843.408 (2)125
N3—H3B···S1ii0.862.573.417 (2)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯S1i0.862.843.408 (2)125
N3—H3B⋯S1ii0.862.573.417 (2)168

Symmetry codes: (i) ; (ii) .

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Authors:  Zhi-Qiang Shi; Ning-Ning Ji; Qin-Qin Ji
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