Literature DB >> 21581230

Benzyl N'-(2-chloro-benzyl-idene)hydrazinecarbodithio-ate.

Zhi-Qiang Shi, Ning-Ning Ji, Qin-Qin Ji.   

Abstract

The asymmetric unit of the title compound, C(15)H(13)ClN(2)S(2), contains two independent mol-ecules, which are linked into a pseudo-centrosymmetric dimer by inter-molecular N-H⋯S hydrogen bonds. The aromatic rings form dihedral angles of 67.06 (3) and 81.85 (2)° in the two independent mol-ecules.

Entities:  

Year:  2008        PMID: 21581230      PMCID: PMC2960048          DOI: 10.1107/S1600536808034892

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biomedical properties of ligands derived from S-benzyl­dithio­carbaza­te, see: Ali et al. (2001 ▶, 2002 ▶); Tarafder et al. (2001 ▶, 2008 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C15H13ClN2S2 M = 320.84 Triclinic, a = 11.877 (2) Å b = 11.906 (2) Å c = 12.623 (3) Å α = 68.242 (3)° β = 71.116 (4)° γ = 82.335 (4)° V = 1568.4 (5) Å3 Z = 4 Mo Kα radiation μ = 0.50 mm−1 T = 295 (2) K 0.12 × 0.10 × 0.06 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.942, T max = 0.971 8397 measured reflections 5524 independent reflections 3436 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.127 S = 0.97 5524 reflections 361 parameters H-atom parameters constrained Δρmax = 0.44 e Å−3 Δρmin = −0.46 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2 and SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL . Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808034892/cv2453sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808034892/cv2453Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H13ClN2S2Z = 4
Mr = 320.84F000 = 664
Triclinic, P1Dx = 1.359 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 11.877 (2) ÅCell parameters from 1618 reflections
b = 11.906 (2) Åθ = 2.6–24.6º
c = 12.623 (3) ŵ = 0.50 mm1
α = 68.242 (3)ºT = 295 (2) K
β = 71.116 (4)ºBlock, yellow
γ = 82.335 (4)º0.12 × 0.10 × 0.06 mm
V = 1568.4 (5) Å3
Bruker APEXII CCD area-detector diffractometer5524 independent reflections
Radiation source: fine-focus sealed tube3436 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.026
T = 295(2) Kθmax = 25.1º
φ and ω scansθmin = 1.8º
Absorption correction: multi-scan(SADABS; Bruker, 2005)h = −11→14
Tmin = 0.942, Tmax = 0.971k = −14→13
8397 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.127  w = 1/[σ2(Fo2) + (0.0533P)2 + 0.4623P] where P = (Fo2 + 2Fc2)/3
S = 0.97(Δ/σ)max = 0.001
5524 reflectionsΔρmax = 0.44 e Å3
361 parametersΔρmin = −0.46 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl20.61916 (10)0.15814 (11)0.57081 (9)0.0994 (4)
S30.36389 (7)0.66976 (8)0.21058 (7)0.0541 (3)
S40.15028 (7)0.61729 (8)0.43141 (7)0.0566 (3)
N30.3563 (2)0.5043 (2)0.4167 (2)0.0514 (7)
H3A0.32700.46340.49140.062*
N40.4704 (2)0.4789 (2)0.3570 (2)0.0478 (7)
C160.6959 (3)0.2483 (3)0.4266 (3)0.0544 (9)
C170.6419 (3)0.3506 (3)0.3648 (3)0.0455 (8)
C180.7096 (3)0.4188 (3)0.2498 (3)0.0554 (9)
H180.67700.48880.20560.066*
C190.8242 (3)0.3835 (3)0.2014 (3)0.0606 (10)
H190.86780.42900.12440.073*
C200.8742 (3)0.2812 (4)0.2663 (3)0.0617 (10)
H200.95180.25840.23320.074*
C210.8112 (3)0.2133 (3)0.3785 (3)0.0631 (10)
H210.84520.14430.42240.076*
C220.5211 (3)0.3882 (3)0.4168 (3)0.0504 (8)
H220.48020.34490.49550.061*
C230.2902 (3)0.5914 (3)0.3608 (3)0.0441 (8)
C240.2502 (3)0.7786 (3)0.1668 (3)0.0612 (10)
H24A0.17720.73720.18610.073*
H24B0.23350.83470.20970.073*
C250.2944 (3)0.8461 (3)0.0345 (3)0.0480 (8)
C260.3717 (3)0.9404 (3)−0.0123 (3)0.0609 (10)
H260.39810.96280.03890.073*
C270.4111 (3)1.0026 (3)−0.1335 (3)0.0689 (11)
H270.46361.0661−0.16340.083*
C280.3730 (3)0.9712 (4)−0.2098 (3)0.0684 (11)
H280.39941.0132−0.29160.082*
C290.2967 (3)0.8785 (4)−0.1655 (3)0.0716 (11)
H290.27020.8573−0.21720.086*
C300.2579 (3)0.8152 (3)−0.0442 (3)0.0623 (10)
H300.20650.7509−0.01510.075*
Cl1−0.22425 (9)0.74778 (9)0.55632 (8)0.0702 (3)
S10.06032 (8)0.28590 (8)0.93397 (7)0.0589 (3)
S20.25595 (8)0.30266 (9)0.70505 (7)0.0619 (3)
N10.0603 (2)0.4336 (2)0.7232 (2)0.0497 (7)
H10.08570.46790.64690.060*
N2−0.0472 (2)0.4698 (2)0.7859 (2)0.0466 (7)
C1−0.2804 (3)0.6881 (3)0.7111 (3)0.0492 (8)
C2−0.2159 (3)0.6018 (3)0.7786 (3)0.0444 (8)
C3−0.2674 (3)0.5582 (3)0.9025 (3)0.0577 (9)
H3−0.22690.50020.95040.069*
C4−0.3772 (3)0.5999 (4)0.9548 (3)0.0728 (11)
H4−0.40980.57081.03750.087*
C5−0.4383 (3)0.6844 (4)0.8849 (4)0.0804 (13)
H5−0.51280.71180.92050.097*
C6−0.3909 (3)0.7286 (4)0.7634 (3)0.0669 (10)
H6−0.43290.78570.71640.080*
C7−0.1006 (3)0.5565 (3)0.7233 (3)0.0461 (8)
H7−0.06520.59100.64130.055*
C80.1257 (3)0.3461 (3)0.7791 (3)0.0446 (8)
C90.1668 (3)0.1677 (3)0.9769 (3)0.0613 (10)
H9A0.18020.11500.93080.074*
H9B0.24210.20300.96140.074*
C100.1176 (3)0.0961 (3)1.1086 (3)0.0476 (8)
C110.1692 (3)0.1043 (3)1.1888 (3)0.0572 (9)
H110.23250.15611.16200.069*
C120.1273 (3)0.0359 (3)1.3090 (3)0.0639 (10)
H120.16320.04151.36220.077*
C130.0338 (3)−0.0398 (3)1.3501 (3)0.0632 (10)
H130.0060−0.08541.43100.076*
C14−0.0190 (3)−0.0484 (3)1.2711 (3)0.0672 (11)
H14−0.0827−0.09991.29830.081*
C150.0231 (3)0.0200 (3)1.1512 (3)0.0617 (10)
H15−0.01320.01441.09820.074*
U11U22U33U12U13U23
Cl20.0801 (8)0.0990 (9)0.0654 (7)0.0195 (6)−0.0101 (6)0.0142 (6)
S30.0454 (5)0.0542 (6)0.0410 (5)0.0071 (4)−0.0009 (4)−0.0054 (4)
S40.0451 (5)0.0626 (6)0.0416 (5)0.0100 (4)−0.0017 (4)−0.0085 (4)
N30.0410 (16)0.0570 (18)0.0386 (15)0.0077 (13)−0.0044 (12)−0.0063 (13)
N40.0396 (15)0.0508 (17)0.0441 (16)0.0053 (13)−0.0071 (13)−0.0135 (13)
C160.046 (2)0.064 (2)0.0444 (19)0.0060 (17)−0.0116 (16)−0.0131 (17)
C170.0387 (18)0.050 (2)0.0456 (18)0.0053 (15)−0.0141 (15)−0.0155 (16)
C180.051 (2)0.056 (2)0.054 (2)0.0006 (17)−0.0130 (17)−0.0162 (17)
C190.056 (2)0.069 (3)0.052 (2)−0.005 (2)−0.0029 (18)−0.0267 (19)
C200.045 (2)0.077 (3)0.070 (3)0.012 (2)−0.0156 (19)−0.040 (2)
C210.057 (2)0.071 (3)0.063 (2)0.019 (2)−0.027 (2)−0.025 (2)
C220.047 (2)0.052 (2)0.0402 (18)0.0013 (17)−0.0081 (16)−0.0086 (16)
C230.0441 (18)0.0427 (19)0.0399 (17)0.0017 (15)−0.0081 (15)−0.0126 (15)
C240.049 (2)0.059 (2)0.051 (2)0.0140 (17)−0.0038 (17)−0.0065 (17)
C250.0372 (18)0.045 (2)0.0478 (19)0.0061 (15)−0.0070 (15)−0.0073 (16)
C260.064 (2)0.065 (2)0.051 (2)−0.010 (2)−0.0216 (18)−0.0108 (19)
C270.073 (3)0.062 (3)0.057 (2)−0.020 (2)−0.014 (2)−0.002 (2)
C280.064 (2)0.075 (3)0.048 (2)0.002 (2)−0.0136 (19)−0.004 (2)
C290.064 (2)0.093 (3)0.060 (2)0.000 (2)−0.026 (2)−0.024 (2)
C300.044 (2)0.060 (2)0.077 (3)−0.0071 (18)−0.0144 (19)−0.019 (2)
Cl10.0795 (7)0.0724 (7)0.0449 (5)0.0055 (5)−0.0195 (5)−0.0065 (4)
S10.0544 (5)0.0630 (6)0.0368 (5)0.0098 (4)−0.0037 (4)−0.0044 (4)
S20.0575 (6)0.0645 (6)0.0414 (5)0.0168 (5)−0.0038 (4)−0.0092 (4)
N10.0471 (16)0.0566 (18)0.0324 (14)0.0087 (14)−0.0064 (12)−0.0090 (13)
N20.0382 (15)0.0541 (17)0.0400 (15)0.0016 (13)−0.0064 (12)−0.0133 (13)
C10.050 (2)0.053 (2)0.0430 (19)0.0028 (17)−0.0150 (16)−0.0158 (16)
C20.0414 (18)0.048 (2)0.0406 (18)−0.0013 (15)−0.0083 (15)−0.0144 (15)
C30.056 (2)0.061 (2)0.045 (2)0.0045 (18)−0.0118 (17)−0.0111 (17)
C40.058 (2)0.092 (3)0.049 (2)0.005 (2)−0.0011 (19)−0.019 (2)
C50.050 (2)0.108 (4)0.075 (3)0.021 (2)−0.010 (2)−0.038 (3)
C60.057 (2)0.078 (3)0.065 (3)0.019 (2)−0.025 (2)−0.025 (2)
C70.0427 (18)0.050 (2)0.0369 (17)0.0004 (16)−0.0086 (15)−0.0086 (15)
C80.0452 (18)0.0440 (19)0.0380 (17)0.0020 (15)−0.0105 (15)−0.0095 (15)
C90.059 (2)0.061 (2)0.044 (2)0.0099 (18)−0.0101 (17)−0.0044 (17)
C100.053 (2)0.044 (2)0.0389 (17)0.0089 (16)−0.0134 (16)−0.0101 (15)
C110.065 (2)0.049 (2)0.053 (2)−0.0041 (18)−0.0205 (18)−0.0095 (17)
C120.076 (3)0.070 (3)0.047 (2)0.009 (2)−0.026 (2)−0.0189 (19)
C130.077 (3)0.060 (2)0.0364 (19)0.010 (2)−0.0092 (19)−0.0085 (17)
C140.066 (2)0.065 (3)0.055 (2)−0.011 (2)−0.007 (2)−0.011 (2)
C150.066 (2)0.069 (3)0.050 (2)−0.003 (2)−0.0174 (19)−0.0199 (19)
Cl2—C161.742 (3)Cl1—C11.738 (3)
S3—C231.750 (3)S1—C81.751 (3)
S3—C241.815 (3)S1—C91.810 (3)
S4—C231.662 (3)S2—C81.657 (3)
N3—C231.337 (4)N1—C81.334 (4)
N3—N41.376 (3)N1—N21.375 (3)
N3—H3A0.8600N1—H10.8600
N4—C221.271 (4)N2—C71.279 (4)
C16—C171.384 (4)C1—C61.377 (5)
C16—C211.384 (5)C1—C21.390 (4)
C17—C181.399 (4)C2—C31.398 (4)
C17—C221.458 (4)C2—C71.455 (4)
C18—C191.380 (5)C3—C41.376 (5)
C18—H180.9300C3—H30.9300
C19—C201.375 (5)C4—C51.371 (5)
C19—H190.9300C4—H40.9300
C20—C211.358 (5)C5—C61.366 (5)
C20—H200.9300C5—H50.9300
C21—H210.9300C6—H60.9300
C22—H220.9300C7—H70.9300
C24—C251.503 (4)C9—C101.512 (4)
C24—H24A0.9700C9—H9A0.9700
C24—H24B0.9700C9—H9B0.9700
C25—C261.373 (4)C10—C151.374 (4)
C25—C301.379 (5)C10—C111.378 (4)
C26—C271.377 (5)C11—C121.384 (5)
C26—H260.9300C11—H110.9300
C27—C281.366 (5)C12—C131.364 (5)
C27—H270.9300C12—H120.9300
C28—C291.355 (5)C13—C141.377 (5)
C28—H280.9300C13—H130.9300
C29—C301.381 (5)C14—C151.382 (5)
C29—H290.9300C14—H140.9300
C30—H300.9300C15—H150.9300
C23—S3—C24101.41 (15)C8—S1—C9101.13 (15)
C23—N3—N4121.2 (2)C8—N1—N2121.0 (2)
C23—N3—H3A119.4C8—N1—H1119.5
N4—N3—H3A119.4N2—N1—H1119.5
C22—N4—N3115.6 (3)C7—N2—N1115.5 (3)
C17—C16—C21122.5 (3)C6—C1—C2121.8 (3)
C17—C16—Cl2120.3 (3)C6—C1—Cl1117.5 (3)
C21—C16—Cl2117.3 (3)C2—C1—Cl1120.7 (3)
C16—C17—C18116.9 (3)C1—C2—C3117.1 (3)
C16—C17—C22122.2 (3)C1—C2—C7121.8 (3)
C18—C17—C22120.9 (3)C3—C2—C7121.0 (3)
C19—C18—C17120.8 (3)C4—C3—C2121.1 (3)
C19—C18—H18119.6C4—C3—H3119.5
C17—C18—H18119.6C2—C3—H3119.5
C20—C19—C18120.3 (3)C5—C4—C3119.9 (4)
C20—C19—H19119.9C5—C4—H4120.1
C18—C19—H19119.9C3—C4—H4120.1
C21—C20—C19120.5 (3)C6—C5—C4120.6 (4)
C21—C20—H20119.8C6—C5—H5119.7
C19—C20—H20119.8C4—C5—H5119.7
C20—C21—C16119.2 (3)C5—C6—C1119.5 (4)
C20—C21—H21120.4C5—C6—H6120.3
C16—C21—H21120.4C1—C6—H6120.3
N4—C22—C17121.6 (3)N2—C7—C2120.9 (3)
N4—C22—H22119.2N2—C7—H7119.6
C17—C22—H22119.2C2—C7—H7119.6
N3—C23—S4121.1 (2)N1—C8—S2121.6 (2)
N3—C23—S3114.0 (2)N1—C8—S1113.4 (2)
S4—C23—S3124.88 (19)S2—C8—S1125.03 (19)
C25—C24—S3108.6 (2)C10—C9—S1108.5 (2)
C25—C24—H24A110.0C10—C9—H9A110.0
S3—C24—H24A110.0S1—C9—H9A110.0
C25—C24—H24B110.0C10—C9—H9B110.0
S3—C24—H24B110.0S1—C9—H9B110.0
H24A—C24—H24B108.4H9A—C9—H9B108.4
C26—C25—C30117.7 (3)C15—C10—C11118.4 (3)
C26—C25—C24121.6 (3)C15—C10—C9121.5 (3)
C30—C25—C24120.8 (3)C11—C10—C9120.0 (3)
C25—C26—C27121.3 (3)C10—C11—C12120.4 (3)
C25—C26—H26119.4C10—C11—H11119.8
C27—C26—H26119.4C12—C11—H11119.8
C28—C27—C26120.1 (3)C13—C12—C11120.6 (3)
C28—C27—H27119.9C13—C12—H12119.7
C26—C27—H27119.9C11—C12—H12119.7
C29—C28—C27119.6 (3)C12—C13—C14119.6 (3)
C29—C28—H28120.2C12—C13—H13120.2
C27—C28—H28120.2C14—C13—H13120.2
C28—C29—C30120.5 (4)C13—C14—C15119.6 (3)
C28—C29—H29119.8C13—C14—H14120.2
C30—C29—H29119.8C15—C14—H14120.2
C25—C30—C29120.9 (3)C10—C15—C14121.3 (3)
C25—C30—H30119.6C10—C15—H15119.3
C29—C30—H30119.6C14—C15—H15119.3
C23—N3—N4—C22−174.7 (3)C8—N1—N2—C7178.3 (3)
C21—C16—C17—C18−0.1 (5)C6—C1—C2—C3−0.5 (5)
Cl2—C16—C17—C18179.5 (3)Cl1—C1—C2—C3−179.9 (3)
C21—C16—C17—C22−178.8 (3)C6—C1—C2—C7178.3 (3)
Cl2—C16—C17—C220.8 (5)Cl1—C1—C2—C7−1.0 (4)
C16—C17—C18—C190.7 (5)C1—C2—C3—C4−0.3 (5)
C22—C17—C18—C19179.4 (3)C7—C2—C3—C4−179.2 (3)
C17—C18—C19—C20−0.9 (5)C2—C3—C4—C50.8 (6)
C18—C19—C20—C210.5 (6)C3—C4—C5—C6−0.6 (6)
C19—C20—C21—C160.1 (6)C4—C5—C6—C1−0.2 (6)
C17—C16—C21—C20−0.3 (6)C2—C1—C6—C50.8 (6)
Cl2—C16—C21—C20−179.9 (3)Cl1—C1—C6—C5−179.8 (3)
N3—N4—C22—C17179.8 (3)N1—N2—C7—C2179.0 (3)
C16—C17—C22—N4−176.4 (3)C1—C2—C7—N2−174.0 (3)
C18—C17—C22—N45.0 (5)C3—C2—C7—N24.8 (5)
N4—N3—C23—S4176.9 (2)N2—N1—C8—S2−179.3 (2)
N4—N3—C23—S3−2.0 (4)N2—N1—C8—S10.3 (4)
C24—S3—C23—N3−179.2 (3)C9—S1—C8—N1177.0 (2)
C24—S3—C23—S41.8 (3)C9—S1—C8—S2−3.5 (3)
C23—S3—C24—C25−174.0 (2)C8—S1—C9—C10−174.1 (2)
S3—C24—C25—C26−80.4 (4)S1—C9—C10—C1571.2 (4)
S3—C24—C25—C3099.9 (3)S1—C9—C10—C11−110.1 (3)
C30—C25—C26—C270.4 (5)C15—C10—C11—C120.9 (5)
C24—C25—C26—C27−179.4 (3)C9—C10—C11—C12−177.8 (3)
C25—C26—C27—C280.2 (6)C10—C11—C12—C13−0.6 (6)
C26—C27—C28—C29−0.1 (6)C11—C12—C13—C140.2 (6)
C27—C28—C29—C30−0.5 (6)C12—C13—C14—C15−0.1 (6)
C26—C25—C30—C29−0.9 (5)C11—C10—C15—C14−0.9 (6)
C24—C25—C30—C29178.8 (3)C9—C10—C15—C14177.8 (3)
C28—C29—C30—C251.0 (6)C13—C14—C15—C100.5 (6)
D—H···AD—HH···AD···AD—H···A
N1—H1···S40.862.563.405 (3)166
N3—H3A···S20.862.603.451 (3)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯S40.862.563.405 (3)166
N3—H3A⋯S20.862.603.451 (3)169
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Biological activity of palladium(II) and platinum(II) complexes of the acetone Schiff bases of S-methyl- and S-benzyldithiocarbazate and the X-ray crystal structure of the [Pd(asme)2] (asme=anionic form of the acetone Schiff base of S-methyldithiocarbazate) complex.

Authors:  Mohammad Akbar Ali; Aminul Huq Mirza; Raymond J Butcher; M T H Tarafder; Tan Boon Keat; A Manaf Ali
Journal:  J Inorg Biochem       Date:  2002-11-25       Impact factor: 4.155

3.  Bis[benzyl N'-(3-phenyl-prop-2-enyl-idene)hydrazinecarbodithio-ato-κN',S]copper(II).

Authors:  M T H Tarafder; M Toihidul Islam; M A A A A Islam; Suchada Chantrapromma; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-01-25
  3 in total
  2 in total

1.  (E)-1-[4-(Dimethyl-amino)benzyl-idene]thio-semicarbazide.

Authors:  Yuying Sun; Shizhou Fu; Junhong Zhang; Xiao Wang; Daqi Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-08

2.  Crystal structure of benzyl N'-[(1E,4E)-1,5-bis-(4-meth-oxy-phen-yl)penta-1,4-dien-3-yl-idene]hydrazine-1-carbodi-thio-ate.

Authors:  Nabeel Arif Tawfeeq; Huey Chong Kwong; Mohamed Ibrahim Mohamed Tahir; Thahira B S A Ravoof
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-10-03
  2 in total

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