Literature DB >> 21581771

Chlorido[N'-(2-oxidobenzil-idene)acetohydrazide-κO,N',O']copper(II) dihydrate.

Farba Bouyagui Tamboura, Mohamed Gaye, Abdou Salam Sall, Aliou Hamady Barry, Youssouph Bah.   

Abstract

In the title complex, [Cu(C(9)H(9)N(2)O(2))Cl]·2H(2)O, prepared from the Schiff base ligand N'-(2-hydroxy-benzil-idene)aceto-hydrazide and copper(II) chloride, the Cu(II) atom is coord-inated by two O atoms and one N atom from the ligand and by a Cl atom in a distorted square-planar geometry. The two donor O atoms of the tridentate Schiff base ligand are in a trans arrangement. In the crystal structure, there is an extensive inter-molecular hydrogen-bonding network; N-H⋯O, O-H⋯O and O-H⋯Cl inter-actions, involving the uncoordinated water mol-ecules, lead to the formation of a two-dimensional network parallel to the ab plane.

Entities:  

Year:  2009        PMID: 21581771      PMCID: PMC2968131          DOI: 10.1107/S1600536809000105

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Ainscough et al. (1998 ▶); Chan et al. (1995 ▶); Koh et al. (1998 ▶). For similar square-planar copper(II) complexes, see: Li et al. (2008 ▶); Qiu & Wu (2004 ▶).

Experimental

Crystal data

[Cu(C9H9N2O2)Cl]·2H2O M = 312.20 Triclinic, a = 6.762 (2) Å b = 8.987 (2) Å c = 10.312 (3) Å α = 76.940 (11)° β = 84.645 (12)° γ = 81.903 (13)° V = 603.1 (3) Å3 Z = 2 Mo Kα radiation μ = 2.04 mm−1 T = 173 (2) K 0.16 × 0.12 × 0.10 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 5193 measured reflections 3520 independent reflections 3036 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.075 S = 1.06 3520 reflections 174 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.50 e Å−3 Δρmin = −0.58 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809000105/su2089sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809000105/su2089Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C9H9N2O2)Cl]·2H2OZ = 2
Mr = 312.20F(000) = 318
Triclinic, P1Dx = 1.719 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.762 (2) ÅCell parameters from 2138 reflections
b = 8.987 (2) Åθ = 1.0–30.0°
c = 10.312 (3) ŵ = 2.04 mm1
α = 76.940 (11)°T = 173 K
β = 84.645 (12)°Prism, green
γ = 81.903 (13)°0.16 × 0.12 × 0.10 mm
V = 603.1 (3) Å3
Nonius KappaCCD diffractometer3036 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.021
graphiteθmax = 30.0°, θmin = 2.8°
π[Please check] scansh = −9→8
5193 measured reflectionsk = −12→12
3520 independent reflectionsl = −13→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.075H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[s2(Fo2) + (0.0139P)2 + 0.4006P] where P = (Fo2 + 2Fc2)/3
3520 reflections(Δ/σ)max = 0.036
174 parametersΔρmax = 0.50 e Å3
4 restraintsΔρmin = −0.58 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.70935 (3)0.12114 (2)0.20663 (2)0.01876 (7)
Cl10.59285 (8)0.32377 (5)0.29307 (5)0.02773 (12)
O10.6694 (2)0.22971 (14)0.02897 (14)0.0247 (3)
O20.7955 (2)−0.00478 (15)0.37823 (14)0.0238 (3)
O30.9689 (3)−0.47969 (18)0.23882 (18)0.0330 (4)
O40.2576 (3)0.44891 (19)0.04512 (18)0.0342 (4)
N10.8652 (2)−0.18532 (18)0.25675 (17)0.0200 (3)
H10.899 (4)−0.273 (3)0.249 (3)0.032 (7)*
N20.7995 (2)−0.07024 (16)0.15054 (15)0.0169 (3)
C10.6714 (3)0.1693 (2)−0.07799 (19)0.0195 (4)
C20.6135 (3)0.2688 (2)−0.1980 (2)0.0229 (4)
H20.57410.3749−0.19950.050*
C30.6125 (3)0.2164 (2)−0.3137 (2)0.0251 (4)
H30.57350.2867−0.39340.050*
C40.6682 (3)0.0608 (2)−0.3152 (2)0.0263 (4)
H40.66680.0249−0.39490.050*
C50.7249 (3)−0.0390 (2)−0.1993 (2)0.0231 (4)
H50.7630−0.1448−0.19980.050*
C60.7283 (3)0.0114 (2)−0.07873 (19)0.0189 (4)
C70.7920 (3)−0.1029 (2)0.03622 (19)0.0193 (4)
H70.8299−0.20620.02730.050*
C80.8581 (3)−0.1417 (2)0.37220 (19)0.0210 (4)
C90.9213 (3)−0.2590 (2)0.4927 (2)0.0286 (4)
H9A0.9653−0.35810.46790.050*
H9B0.8083−0.26980.55950.050*
H9C1.0320−0.22620.52980.050*
HW11.054 (4)−0.504 (3)0.180 (2)0.050 (9)*
HW20.873 (4)−0.529 (4)0.240 (4)0.089 (13)*
HW30.286 (5)0.539 (2)0.014 (3)0.067 (10)*
HW40.367 (4)0.398 (4)0.067 (4)0.076 (11)*
U11U22U33U12U13U23
Cu10.02308 (13)0.01631 (12)0.01686 (13)−0.00064 (8)−0.00474 (9)−0.00321 (8)
Cl10.0375 (3)0.0199 (2)0.0257 (3)0.00195 (19)−0.0029 (2)−0.00765 (18)
O10.0400 (8)0.0171 (6)0.0174 (7)−0.0032 (6)−0.0073 (6)−0.0024 (5)
O20.0316 (8)0.0215 (6)0.0178 (7)0.0027 (5)−0.0065 (6)−0.0049 (5)
O30.0398 (10)0.0234 (7)0.0359 (10)−0.0038 (7)−0.0016 (8)−0.0069 (7)
O40.0302 (9)0.0296 (8)0.0425 (10)−0.0032 (7)−0.0075 (7)−0.0052 (7)
N10.0234 (8)0.0161 (7)0.0192 (8)−0.0002 (6)−0.0047 (6)−0.0013 (6)
N20.0173 (7)0.0153 (7)0.0173 (8)−0.0008 (5)−0.0048 (6)−0.0008 (6)
C10.0191 (9)0.0223 (9)0.0176 (9)−0.0052 (7)−0.0017 (7)−0.0034 (7)
C20.0249 (10)0.0219 (9)0.0208 (10)−0.0048 (7)−0.0042 (8)−0.0002 (7)
C30.0233 (10)0.0341 (10)0.0167 (9)−0.0066 (8)−0.0031 (8)−0.0003 (8)
C40.0268 (10)0.0367 (11)0.0179 (10)−0.0075 (8)−0.0012 (8)−0.0088 (8)
C50.0223 (9)0.0263 (9)0.0223 (10)−0.0042 (7)−0.0001 (8)−0.0087 (8)
C60.0188 (8)0.0220 (9)0.0169 (9)−0.0050 (7)−0.0023 (7)−0.0042 (7)
C70.0190 (9)0.0190 (8)0.0204 (9)−0.0028 (7)−0.0018 (7)−0.0049 (7)
C80.0197 (9)0.0242 (9)0.0178 (9)−0.0011 (7)−0.0030 (7)−0.0022 (7)
C90.0357 (11)0.0271 (10)0.0198 (10)0.0008 (8)−0.0066 (9)0.0009 (8)
Cu1—O11.8951 (13)C1—C61.419 (3)
Cu1—N21.9373 (15)C2—C31.380 (3)
Cu1—O21.9628 (13)C2—H20.9500
Cu1—Cl12.2203 (5)C3—C41.399 (3)
O1—C11.333 (2)C3—H30.9500
O2—C81.257 (2)C4—C51.373 (3)
O3—HW10.837 (17)C4—H40.9500
O3—HW20.837 (18)C5—C61.420 (3)
O4—HW30.840 (18)C5—H50.9500
O4—HW40.835 (18)C6—C71.438 (2)
N1—C81.330 (2)C7—H70.9500
N1—N21.384 (2)C8—C91.489 (3)
N1—H10.81 (3)C9—H9A0.9800
N2—C71.285 (2)C9—H9B0.9800
C1—C21.406 (3)C9—H9C0.9800
O1—Cu1—N292.17 (6)C2—C3—H3119.6
O1—Cu1—O2170.21 (6)C4—C3—H3119.6
N2—Cu1—O281.39 (6)C5—C4—C3118.78 (18)
O1—Cu1—Cl193.63 (4)C5—C4—H4120.6
N2—Cu1—Cl1173.31 (5)C3—C4—H4120.6
O2—Cu1—Cl193.27 (4)C4—C5—C6121.80 (18)
C1—O1—Cu1126.91 (11)C4—C5—H5119.1
C8—O2—Cu1112.67 (12)C6—C5—H5119.1
HW1—O3—HW2107 (3)C1—C6—C5119.09 (17)
HW3—O4—HW4104 (3)C1—C6—C7123.89 (17)
C8—N1—N2114.80 (15)C5—C6—C7117.02 (17)
C8—N1—H1123.0 (18)N2—C7—C6122.26 (16)
N2—N1—H1122.1 (18)N2—C7—H7118.9
C7—N2—N1119.37 (15)C6—C7—H7118.9
C7—N2—Cu1129.28 (12)O2—C8—N1119.94 (16)
N1—N2—Cu1111.15 (12)O2—C8—C9121.56 (18)
O1—C1—C2117.80 (17)N1—C8—C9118.49 (17)
O1—C1—C6124.33 (16)C8—C9—H9A109.5
C2—C1—C6117.88 (17)C8—C9—H9B109.5
C3—C2—C1121.67 (18)H9A—C9—H9B109.5
C3—C2—H2119.2C8—C9—H9C109.5
C1—C2—H2119.2H9A—C9—H9C109.5
C2—C3—C4120.79 (18)H9B—C9—H9C109.5
D—H···AD—HH···AD···AD—H···A
N1—H1···O30.81 (3)1.88 (3)2.683 (2)177 (3)
O3—HW1···O4i0.84 (2)1.94 (2)2.777 (3)177 (3)
O3—HW2···Cl1ii0.84 (2)2.41 (2)3.2333 (18)168 (4)
O4—HW3···O1iii0.84 (2)2.09 (2)2.916 (2)169 (3)
O4—HW4···O10.84 (2)2.43 (2)3.191 (2)153 (3)
O4—HW4···Cl10.84 (2)2.80 (3)3.4648 (17)137 (3)
Cu1—O11.8951 (13)
Cu1—N21.9373 (15)
Cu1—O21.9628 (13)
Cu1—Cl12.2203 (5)
O1—Cu1—N292.17 (6)
O1—Cu1—O2170.21 (6)
N2—Cu1—O281.39 (6)
O1—Cu1—Cl193.63 (4)
N2—Cu1—Cl1173.31 (5)
O2—Cu1—Cl193.27 (4)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O30.81 (3)1.88 (3)2.683 (2)177 (3)
O3—HW1⋯O4i0.837 (17)1.941 (18)2.777 (3)177 (3)
O3—HW2⋯Cl1ii0.837 (18)2.41 (2)3.2333 (18)168 (4)
O4—HW3⋯O1iii0.840 (18)2.087 (19)2.916 (2)169 (3)
O4—HW4⋯O10.835 (18)2.43 (2)3.191 (2)153 (3)
O4—HW4⋯Cl10.835 (18)2.80 (3)3.4648 (17)137 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Complexes of salicylaldehyde acylhydrazones: cytotoxicity, QSAR and crystal structure of the sterically hindered t-butyl dimer.

Authors:  L L Koh; O L Kon; K W Loh; Y C Long; J D Ranford; A L Tan; Y Y Tjan
Journal:  J Inorg Biochem       Date:  1998-12       Impact factor: 4.155

3.  Chlorido{2-[1-(2-pyridylmethyl-imino)eth-yl]pyrrolato-κN,N',N''}copper(II).

Authors:  Rongqing Li; Pusu Zhao; Guodong Tang; Yujia Tao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-03-14
  3 in total
  15 in total

1.  N'-(3-Methoxy-benzyl-idene)aceto-hydrazide.

Authors:  Lu-Ping Lv; Tie-Ming Yu; Wen-Bo Yu; Wei-Wei Li; Xian-Chao Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-25

2.  N'-(3,4-Dihydroxy-benzyl-idene)acetohydrazide.

Authors:  Wei-Wei Li; Lu-Ping Lv; Wen-Bo Yu; Yong-Zhao Zhang; Xian-Chao Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-08

3.  N'-(3,4-Dimethoxy-benzyl-idene)aceto-hydrazide.

Authors:  Bao-Cheng Zhou; Lu-Ping Lv; Wen-Bo Yu; Wei-Wei Li; Xian-Chao Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-25

4.  N'-(4-Hydr-oxy-3-methoxy-benzyl-idene)acetohydrazide monohydrate.

Authors:  Lu-Ping Lv; Wen-Bo Yu; Ying Tan; Yong-Zhao Zhang; Xian-Chao Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-26

5.  {2-[(2-Acetyl-hydrazin-1-yl-idene)methyl-κN,O]-6-methoxy-phenolato-κO}(nitrato-κO)copper(II) monohydrate.

Authors:  Ibrahima Elhadj Thiam; Pascal Retailleau; Alda Navaza; Mohamed Gaye
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-09

6.  N'-[4-(Dimethyl-amino)benzyl-idene]acetohydrazide.

Authors:  Wei-Wei Li; Tie-Ming Yu; Wen-Bo Yu; Lu-Ping Lv; Xian-Chao Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-22

7.  N'-(2-Furylmethyl-ene)acetohydrazide.

Authors:  Lu-Ping Lv; Tie-Ming Yu; Wen-Bo Yu; Wei-Wei Li; Xian-Chao Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-29

8.  N'-(2-Meth-oxy-benzyl-idene)aceto-hydrazide.

Authors:  Tie-Ming Yu; Lu-Ping Lv
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-30

9.  N'-(3,4-Dimethoxy-benzyl-idene)acetohydrazide.

Authors:  Lu-Ping Lv; Tie-Ming Yu; Wen-Bo Yu; Wei-Wei Li; Xian-Chao Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-25

10.  N'-(3,4-Dihydroxy-benzyl-idene)acetohydrazide monohydrate.

Authors:  Lu-Ping Lv; Tie-Ming Yu; Wen-Bo Yu; Wei-Wei Li; Xian-Chao Hu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18
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